Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1070 ATGAGCTCCAATAATGGTGGAATTGGGAGTGGAGACTTAGCCAGTTTTGTTCGACAAGTGGTGGTAGGGCGATGGTTTTCCCTTTTCGCTTCATTTCTTGTAATGACCGGTGCTGGCGGAGTTTATTTGTTCGCTTATTTCTCTAGAGACATCAAAGCTACGCTCAAATGTGACCAAACAACGCTCAACATGATTGGGTTTTACAAAGACCTGGGATCAAACGTCGGCATTATTGCCGGCTTGTTGGCAGAGGTAGCACCGACTTGGTTCATTCTTCTCGTCGGCGCCGCCTTCAACTTCCTTGGCTACTTCAAGATATGGCAAGCCGTCACCGGAAAAATTGTTCGGCCGACCGTTGAGTATTTTTGCCTTTACATTATGGTCGGAGCAAATTCTCAGAATTTCGCCAATACAGGAGTACTAGTGACGTGCGTGAAGAACTTCCCAGAAAGAAGAGGGGTCTTGTTGGGCCTTTTGAAGGGCTTCGTGGGCCTAAGTGGGGCTATAATGACCCAACTTTACATCGCCATTTATGGTCACGATACTAAGTCTCTAGTTTTGTTCATTGCGTGGTTCCCGACTTTGATTTCTTTGATTTTCATTTACACAATCAGGGAAATGAAATTCGTAAAACACCCAAACGAGTTCAGAGTCTTCGTTCAGTTTTTATGCGTCACCATCGTTTTGGCTTTGTTTCTCACTGCCTTGATTTTCGTTCAAAAAAGAGTCAAAATCGACCAATCTTCCCACAACGCAATCATAGCTTCAATAATGGCTCTGCTTTTTATCCCACTATTGATCGCCATTAGAGAAGAAATCGTTCTCTGGAATCTCGGAAAAAGAACCGTCGGAAATCCCTTCACTAGAATAAAAGTCGACAACCCCCAACCAGCAGAAAAAACTCCCAAATCAAACCCAACCCAAAACCAAACCAACTCTTCCTGCTTTGCAAACATTTTCAATAAACCTGAAAGAGGCGAAGACTACACAATCCTCCAAGCAATTTTCAGCATCGACATGTTGATCTTATTTCTCGCAATGCTATTCGGCGCCGGCGCGAGCTTGACTGCCATCGACAATCTGGGTCAAATCGGAGAATCCCAAGGCTACCCATCCGAAACAATCAACTCATTTATCTCTCTGGTCAGCATTTTCAACTTCACCGGCAGAATCTTCTCAGGTTTTGTCTCAGAAATCTTGCTCGAGAAATTTAAATTCCCAAGGCCGTTGATGTTGACTCTCGTACTCTTGGTTTCGTGCATCGGGCATCTTTTGGTTGCCTTCCCCTTCGAAGATTCGCTCTACATTGCATCCATCATAATTGGGTTTTCGATGGGATCTCAAGTTCCATTGCATTTCGCGATGATTTCAGAGATTTTTGGGTTGAAGCATTACTCGACGTTGTTCAATTTTGGGCAATTGTCTTGCCCGATTGGGTCTTACATTTTGAACGTGATGGTGACTGGGAAGTTGTACGACGAGGCGACAAAGATGGGGAATAATGTGAGCAAGTTTCATTGTGAAGGGAGACACTGTTACGAACAATCGTTTACGATTTTGGCGGGGTTGACGTTTTTTGTGGCTATGACATCCTTGATTTTGGTGGGGAGAACGAGAGAGTTTTATAGAGGGGATATTTACAAGAAATTTAAGGAAGATATGGATTCTTTGAAGACGGAAGTTGAGTTTTATCCGGTGGATGAGAAGAGGACTAGGATTGGGAATTTACTTGTTGACAAACATACCATCAATTTCAAGAAGTGA 1764 43.54 MSSNNGGIGSGDLASFVRQVVVGRWFSLFASFLVMTGAGGVYLFAYFSRDIKATLKCDQTTLNMIGFYKDLGSNVGIIAGLLAEVAPTWFILLVGAAFNFLGYFKIWQAVTGKIVRPTVEYFCLYIMVGANSQNFANTGVLVTCVKNFPERRGVLLGLLKGFVGLSGAIMTQLYIAIYGHDTKSLVLFIAWFPTLISLIFIYTIREMKFVKHPNEFRVFVQFLCVTIVLALFLTALIFVQKRVKIDQSSHNAIIASIMALLFIPLLIAIREEIVLWNLGKRTVGNPFTRIKVDNPQPAEKTPKSNPTQNQTNSSCFANIFNKPERGEDYTILQAIFSIDMLILFLAMLFGAGASLTAIDNLGQIGESQGYPSETINSFISLVSIFNFTGRIFSGFVSEILLEKFKFPRPLMLTLVLLVSCIGHLLVAFPFEDSLYIASIIIGFSMGSQVPLHFAMISEIFGLKHYSTLFNFGQLSCPIGSYILNVMVTGKLYDEATKMGNNVSKFHCEGRHCYEQSFTILAGLTFFVAMTSLILVGRTREFYRGDIYKKFKEDMDSLKTEVEFYPVDEKRTRIGNLLVDKHTINFKK 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42651947 42654132 - Hsped.10g10700.1 Hepe10g1070 581617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1070 587 MobiDBLite consensus disorder prediction 290 312 - -
Hepe10g1070 587 CDD MFS_Mch1p_like 23 528 - -
Hepe10g1070 587 Pfam Major Facilitator Superfamily 343 536 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe10g1070 587 SUPERFAMILY MFS general substrate transporter 24 540 IPR036259 -
Hepe10g1070 587 Pfam Nodulin-like 24 269 IPR010658 -
Hepe10g1070 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 551 - GO:0016020(PANTHER)
Hepe10g1070 587 MobiDBLite consensus disorder prediction 298 312 - -
Hepe10g1070 587 Gene3D MFS general substrate transporter like domains 313 542 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1059 Hepe-Chr10:42266266 Hepe10g1070 Hepe-Chr10:42651947 1.46e-220 dispersed
Hepe10g1070 Hepe-Chr10:42651947 Hepe10g1074 Hepe-Chr10:42732183 0.0 dispersed
Hepe10g1067 Hepe-Chr10:42526080 Hepe10g1070 Hepe-Chr10:42651947 3.33e-261 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1070 - - - 0.0