Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1077 ATGAGCTCCAATAATGGTGGAATTGGGAGTGGAGACTTAGCCAGTTTTGTTCGACAAGTGGTGGTGGGGCGATGGTTTTCCCTTTTCGCTTCTTTTCTTGTAATGACCGGTGCTGGCGGAGTTTATTTGTTCGCTTATTTCTCTAGAGACATCAAAGCGACGCTCAAATGTGACCAAACAACGCTCAACAAGATTGGGTTTTACAAAGACCTGGGATCAAACGTCGGCATTATTGCCGGCTTGTTGGCAGAGGTAGCACCGACTTGGTTCATTCTTCTCGTCGGCGCCGCCTTCAACTTCCTTGGCTACTTCAAGATATGGCAAGCCGTCACCGGAAAAATTGTTCGGCCGACCGTTGAGTATTTCTGCTTTTACATTATGGTCGGAGCAAATTCTCAGAATTTCGCCAATACAGGAGTACTAGTGACGTGCGTGAAGAACTTCCCAGAAAGAAGAGGGGTCTTGTTGGGCCTTTTGAAGGGCTTCGTGGGCATAAGTGGGGCTATAATGACCCAACTTTACATCGCCATTTATGGTCATGATACTAAGTCTCTAGTTTTGTTCATTGCGTGGTTCCCGACTTTGATTTCTTTGATTTTCATTTACACAATCAGGGAAATGAAATTCGTAAAACACCCAAACGAGTTCAGAGTCTTCGTTCAGTTTTTATGCGTCACCATCGTTTTGGCTTTGTTTCTCACTGCCTTGATTTTCGTTTAA 720 44.72 MSSNNGGIGSGDLASFVRQVVVGRWFSLFASFLVMTGAGGVYLFAYFSRDIKATLKCDQTTLNKIGFYKDLGSNVGIIAGLLAEVAPTWFILLVGAAFNFLGYFKIWQAVTGKIVRPTVEYFCFYIMVGANSQNFANTGVLVTCVKNFPERRGVLLGLLKGFVGISGAIMTQLYIAIYGHDTKSLVLFIAWFPTLISLIFIYTIREMKFVKHPNEFRVFVQFLCVTIVLALFLTALIFV 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 42816445 42818047 - Hsped.10g10770.1 Hepe10g1077 581624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1077 239 SUPERFAMILY MFS general substrate transporter 28 236 IPR036259 -
Hepe10g1077 239 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 237 - GO:0016020(PANTHER)
Hepe10g1077 239 Pfam Nodulin-like 24 237 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1077 Hepe-Chr10:42816445 HepeContig67g0009 Hepe-ChrContig67:1219502 8.36e-78 dispersed
Hepe10g1075 Hepe-Chr10:42771919 Hepe10g1077 Hepe-Chr10:42816445 2.01e-164 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1077 - - - 0.0