Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1128 ATGGGTTGCTTTCGTTGCACTGGTGGTTCATCCAGCAAGAAATCCGAGAATATCGAACAAAACGGTCCCATTATCTTCAAATCTAAAACCCACAACTCCGATGATCGAACGCTTTCAGATAAAACCATCGTGAATTCAAGTTTGGCAGTGAAGAAGGATTCTGATGTGAAGGTAGTTGTGTCTAAAGATGACCAATTGGCTTTAGATGTAAAGAAATTGAATTTGAATGATGAGGTTTCAGAGGAAGGAAAAACCAATAGTCGCGCCAAGACCTTTACGTTTGAAGAACTCGCCGAGGCCACGGGCAATTTCAGGTCAGATTGCTTCTTGGGTGAAGGAGGATTTGGCAAAGTTTACAAGGGGTACTTGCAGAAAGTTAATGAGGTTGTAGCGATCAAACAACTTGACCGAAATGGACTTCAAGGGATTCGGGAGTTCGTTGTGGAAGTCTTGACTTTAAGTCTAGCTGATCACATTAACCTTGTAAAACTCACTGGATTTTGTGCTGAAGGGGATCAGAGGCTGTTGGTTTATGAATACATGCCATTGGGATCATTGGAAAATCATTTACATGATCTTCGACCCGGTGCAAAAGCAATTGATTGGAACACAAGAATGAAAATAGCAGCAGGTGCAGCGAGGGGTTTGGAGTATTTGCACGAGAAGATGAAGCCCCCGGTTATATACCGTGATCTGAAATGCTCAAATATTTTGCTCGGTGAAGGGTATCATCCAAAGCTATCTGATTTCGGATTGGCTAAAGTAGGTCCCATTGGGGATAAAACCCATGTTTCAACCAGGGTTATGGGCACATATGGGTATTGTGCTCCGGATTATGCAATGACAGGCCAGCTAACATTCAAATCAGATGTTTACAGCTTTGGCGTCGTTTTATTGGAACTCATCACTGGCAGGAAAGCAATTGATCAATCAAAACCGCATTCAGAGCAAAATCTTGTGGCTTGGGCGCGACCCTTGTTCAGAGACCGGAAGAAGTTCTCACAAATGGTCGACCCATTGCTCCAAGGACACTATCCCGTGAGAGGATTATACCAATCTCTAGCCATCGCGGCAATGTGCGTTCAGGAGCAACCAAACATGCGGCCAGTTATATCTGATGTGGTTACCGCCTTAAACTACCTAGCGTCCCAGAAATATGATTCCCAAACTCAATCAAACCAAAACTCCCAAAAGAGACCATCATCTACTAAAATGGAATGGGACGATGATAAACAGGAAACTTCAGACAACGACGGGTCAGAGAGAGAGTGA 1272 43.79 MGCFRCTGGSSSKKSENIEQNGPIIFKSKTHNSDDRTLSDKTIVNSSLAVKKDSDVKVVVSKDDQLALDVKKLNLNDEVSEEGKTNSRAKTFTFEELAEATGNFRSDCFLGEGGFGKVYKGYLQKVNEVVAIKQLDRNGLQGIREFVVEVLTLSLADHINLVKLTGFCAEGDQRLLVYEYMPLGSLENHLHDLRPGAKAIDWNTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDVYSFGVVLLELITGRKAIDQSKPHSEQNLVAWARPLFRDRKKFSQMVDPLLQGHYPVRGLYQSLAIAAMCVQEQPNMRPVISDVVTALNYLASQKYDSQTQSNQNSQKRPSSTKMEWDDDKQETSDNDGSERE 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44681528 44684267 - Hsped.10g11280.1 Hepe10g1128 581675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1128 423 MobiDBLite consensus disorder prediction 386 401 - -
Hepe10g1128 423 ProSiteProfiles Protein kinase domain profile. 104 381 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1128 423 FunFam Serine/threonine-protein kinase PBS1 181 397 - -
Hepe10g1128 423 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524(InterPro)
Hepe10g1128 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1128 423 Gene3D Phosphorylase Kinase; domain 1 73 180 - -
Hepe10g1128 423 CDD STKc_IRAK 110 379 - -
Hepe10g1128 423 SUPERFAMILY Protein kinase-like (PK-like) 90 400 IPR011009 -
Hepe10g1128 423 FunFam probable serine/threonine-protein kinase RLCKVII 76 180 - -
Hepe10g1128 423 MobiDBLite consensus disorder prediction 8 22 - -
Hepe10g1128 423 MobiDBLite consensus disorder prediction 402 423 - -
Hepe10g1128 423 Pfam Protein tyrosine and serine/threonine kinase 109 375 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1128 423 Gene3D Transferase(Phosphotransferase) domain 1 181 407 - -
Hepe10g1128 423 SMART serkin_6 104 381 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1128 423 MobiDBLite consensus disorder prediction 386 423 - -
Hepe10g1128 423 MobiDBLite consensus disorder prediction 1 22 - -
Hepe10g1128 423 PANTHER OS07G0668900 PROTEIN 61 402 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g1185 Hepe-Chr7:28179256 Hepe10g1128 Hepe-Chr10:44681528 1.58e-151 dispersed
Hepe08g0844 Hepe-Chr8:7634863 Hepe10g1128 Hepe-Chr10:44681528 1.18e-179 dispersed
Hepe08g1508 Hepe-Chr8:18894900 Hepe10g1128 Hepe-Chr10:44681528 1.36e-143 dispersed
Hepe09g1372 Hepe-Chr9:22427096 Hepe10g1128 Hepe-Chr10:44681528 7.50e-123 dispersed
Hepe10g1128 Hepe-Chr10:44681528 Hepe10g1715 Hepe-Chr10:53888687 3.79e-110 dispersed
Hepe10g1128 Hepe-Chr10:44681528 Hepe08g0900 Hepe-Chr8:8232869 9.05e-64 wgd
Hepe10g1128 Hepe-Chr10:44681528 Hepe08g0783 Hepe-Chr8:7027305 2.22e-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73179 PF00069 Pkinase 4.90E-42 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1128 - - - 0.0