Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1145 ATGGCTGACGTTGGTCAGAACAACACCGCCGGTGATTTTCCTGCTGTTCCTACCCATGGTGGTCAATACGTGCAGTACAATATCTTCGGGAATCCGTTTGAAATCACCTCCAAATATCGCCTGCCTATTTTGCCTATTGGTCGTGGCGCATACGGAATCGTTTGGTATGATGTTCGTCTATTTCGTGTTTTCGAATTGTTGCTGATCTTGTATTCAAACGCCTTTCGATTGAGTTTTTTTTTTTGGATTTGTTTTCTTTGTAGTTCGGTTTTGAATTCCGAGACCAACGAGATGGTTGCGGTTAAGAAGATTGCCAACGCTTTTGATAATCATATGGATGCCAAGCGGACGCTCCGTGAGATTAAGCTTCTCCGGCATTTGGATCATGAAAATGTAATAAGCATAAGAGATGTGATTCCTCCACCTTTACGAAGAGAATTCAATGATGTATACATTTCCACTGAACTAATGGATACTGATCTTCACCAAATAATCCGCTCCAACCAAGGTTTATCAGAAGAGCATTGTCAGTATTTCCTTTATCAGATTCTCCGAGGACTTAAATACATACATTCTGCTAATGTCATTCATCGAGACTTGAAACCGAGCAATCTATTGCTTAATGCCAACTGTGATCTTAAAATTTGTGACTTTGGTCTTGCTCGTCCAACTTCGGAAAATGAATGTATGACAGAGTATGTTGTCACAAGATGGTACAGGGCACCTGAGCTACTATTGAACTCTGATTATACAGCTGCTATAGATATATGGTCTGTTGGTTGCATCTTTCTGGAGCTTATGAATAGAAGACCTTTATTTCCAGGCAGGGATCATGTGCATCAGATGCGTTTATTGACCGAGCTCCTTGGCACACCAAGCGAGTCGGATCTTGGTTTTATTCGAAATGAAGACTCGAAAAGATATCTTCGGCAGCTACCACCACATGCTCGTCAGCCATTGGCCATGGTTTTTCCACATGTTCATCCATTGGCAATTGATCTTGTGGATAAAATGTTGACGTTTGACCCAACAAACAGAATTACTGTTGAAGAAGCATTGGCACATCCATACCTAGAAAGATTGCATGACGTGGCCGACGAGCCAGTTTGCTCAGAGCCATTCTCGTTCGAGTTTGAGCAACAATTCTTGGATGAAGAGCAGATGAAGGAGATGATTTACAGAGAGGCATTGTCACTCAATCCAGAATTTGCATGA 1215 41.89 MADVGQNNTAGDFPAVPTHGGQYVQYNIFGNPFEITSKYRLPILPIGRGAYGIVWYDVRLFRVFELLLILYSNAFRLSFFFWICFLCSSVLNSETNEMVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVISIRDVIPPPLRREFNDVYISTELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENECMTEYVVTRWYRAPELLLNSDYTAAIDIWSVGCIFLELMNRRPLFPGRDHVHQMRLLTELLGTPSESDLGFIRNEDSKRYLRQLPPHARQPLAMVFPHVHPLAIDLVDKMLTFDPTNRITVEEALAHPYLERLHDVADEPVCSEPFSFEFEQQFLDEEQMKEMIYREALSLNPEFA 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 45365074 45368961 + Hsped.10g11450.1 Hepe10g1145 581692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1145 404 ProSitePatterns MAP kinase signature. 108 211 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1145 404 Gene3D Transferase(Phosphotransferase) domain 1 157 385 - -
Hepe10g1145 404 SMART serkin_6 40 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1145 404 Gene3D Phosphorylase Kinase; domain 1 87 395 - -
Hepe10g1145 404 FunFam Mitogen-activated protein kinase 157 385 - -
Hepe10g1145 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 397 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Hepe10g1145 404 ProSiteProfiles Protein kinase domain profile. 40 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1145 404 FunFam Mitogen-activated protein kinase 83 167 - -
Hepe10g1145 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1145 404 Gene3D Phosphorylase Kinase; domain 1 17 63 - -
Hepe10g1145 404 Pfam Protein kinase domain 88 358 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1145 404 SUPERFAMILY Protein kinase-like (PK-like) 90 366 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1145 Hepe-Chr10:45365074 Hepe09g0673 Hepe-Chr9:6368696 2.33e-19 dispersed
Hepe10g1137 Hepe-Chr10:45175894 Hepe10g1145 Hepe-Chr10:45365074 3.33e-174 proximal
Hepe01g1204 Hepe-Chr1:77232656 Hepe10g1145 Hepe-Chr10:45365074 2.63e-28 transposed
Hepe07g2187 Hepe-Chr7:66236722 Hepe10g1145 Hepe-Chr10:45365074 4.49e-22 transposed
Hepe10g0116 Hepe-Chr10:1147313 Hepe10g1145 Hepe-Chr10:45365074 9.21e-205 transposed
Hepe10g0340 Hepe-Chr10:3647195 Hepe10g1145 Hepe-Chr10:45365074 5.03e-21 transposed
Hepe10g1145 Hepe-Chr10:45365074 Hepe06g0588 Hepe-Chr6:43230643 1.15e-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73181 PF00069 Pkinase 1.20E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1145 K20536 - csv:101202796 698.353