Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1189 ATGGCTGGTAAAGCTCAAATCCCTACCAAAAGCTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAACGTTGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCGAAGACAACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATACGTCGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATCCCTTCCAAGGATCATCCTTATGACCCTGCACATGATTCAATTCTTTCGCGAGTAAAGAACTTGTTTGCTACTGAATCGGTGGCATCTGGGAGACGTTAA 393 40.97 MAGKAQIPTKSSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVKNLFATESVASGRR 130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 46510537 46517163 - Hsped.10g11890.1 Hepe10g1189 581736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1189 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220(InterPro)|GO:0046961(InterPro)
Hepe10g1189 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe10g1189 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 126 - GO:0016020(PANTHER)
Hepe10g1189 130 SUPERFAMILY AtpF-like 15 119 IPR036906 GO:0034220(InterPro)
Hepe10g1189 130 FunFam V-type proton ATPase subunit F 9 122 - -
Hepe10g1189 130 NCBIfam V-type ATPase subunit F 12 124 IPR005772 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe10g1189 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g1807 Hepe-Chr9:56597666 Hepe10g1189 Hepe-Chr10:46510537 8.62e-88 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1189 K02151 - csv:101215239 248.44