Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1213 ATGGCGAAAATCCTAATTTCATCTTCACCCTTCATCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGGTCGTCTCCACACTCTTCCTCACCGGAGACACATCGCCACCAGAGTCAATTTCAGCTTCCATCAACTCCCCCCCATCCATACCTTTGATTCTTCCTTCAATTTTGAAGCAATTTCCAGCAGAGCCGAAGGCCTGCTCTATACACTTGCCGACGCAGCGGTTGCAGTGGATTCGACTGTTTCAGGTTCCGCTGATACCGCCGTCCAGAAGAATGGTGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTTGTTCTTAAAGTGTTGAAGGATGGACTTACGTCTGTGCACGTTCCATATGCATATGGATTTGCAATTATTTTACTTACTGTTTTCGTTAAAGTTGCAACTCTTCCTCTCACCAAGCAGCAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCAAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGGCTTTATAGACAAGCTGGAGTTAATCCTTTGGCAGGTTGTTTACCAACTTTGGCCACCATACCAGTTTGGATTGGACTGTATCAAGCCCTTTCTAATGTGGCAAATGAGGGATTATTCACTGAAGGTTTCTTTTGGATTCCCTCTCTTGGTGGACCAACTACTATTGCTGCTCGCCAAAGTGGAGCTGGAATCTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCTTTGGGCTGGTCTGACACTGCAGCATACCTTGTATTACCTATTCTCCTCGTCGCATCTCAGTATGTATCGATGGAAATCATGAAGCCTCCCCAGACCGATGATCCAACACAGAAGAACACGCTCCTAATTTTCAAGTTTCTTCCCCTCATGATCGGTTACTTCTCCTTGTCTGTTCCATCGGGATTATCAATTTACTGGTTCACAAACAATGTTCTCAGCACGGCTCAGCAAGTATGGTTACGCAAATTAGGAGGTGCAAAGCCTGTTATAAATGAGGATGCTGCTGGAATCATCACAGCAGGACGTGCCAAACGAACGTCTGAATCAGGACCAACGGGTGACAGGTTTAAGCAGTTAAGAGAAGAAGAGAAGAAGAATAAGTTAAGTAAGGCAGCTCGATCAGAAGAGATTCAAACTTTGGCTTCTGAGTCTGATATTGAGGATGAGTATGATGGGGAGACAACAGGGAAGGGCGAGGACAGTCTAGAAGAGGCATATGCATCAAGTGCAGACAAAGACATCCCAGCCTATAATCGACAAAAGAGAAGCAAGCGATCAAAGAGGAAACGTGCAGTATGA 1347 45.29 MAKILISSSPFIGSSLPSLSRHGRLHTLPHRRHIATRVNFSFHQLPPIHTFDSSFNFEAISSRAEGLLYTLADAAVAVDSTVSGSADTAVQKNGGWFGFISEAMEVVLKVLKDGLTSVHVPYAYGFAIILLTVFVKVATLPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWSDTAAYLVLPILLVASQYVSMEIMKPPQTDDPTQKNTLLIFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVINEDAAGIITAGRAKRTSESGPTGDRFKQLREEEKKNKLSKAARSEEIQTLASESDIEDEYDGETTGKGEDSLEEAYASSADKDIPAYNRQKRSKRSKRKRAV 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 47178049 47184642 - Hsped.10g12130.1 Hepe10g1213 581760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1213 448 NCBIfam membrane protein insertase YidC 124 337 IPR028055 -
Hepe10g1213 448 PANTHER OXA1 30 382 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(InterPro)|GO:0032977(PANTHER)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Hepe10g1213 448 MobiDBLite consensus disorder prediction 357 448 - -
Hepe10g1213 448 MobiDBLite consensus disorder prediction 364 388 - -
Hepe10g1213 448 Pfam 60Kd inner membrane protein 124 338 IPR028055 -
Hepe10g1213 448 CDD 5TM_YidC_Alb3 125 338 IPR047196 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0811 Hepe-Chr7:9985798 Hepe10g1213 Hepe-Chr10:47178049 2.79e-06 dispersed
Hepe10g0061 Hepe-Chr10:620373 Hepe10g1213 Hepe-Chr10:47178049 7.86e-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1213 K03217 - csv:101217620 762.296