Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1222 ATGGATGAAGATAACGGCGCTCTGATTCAGAGCTTGATCGATGTTGTGAGCGAGATTGCTTGGATCTCGGATTTTAGGCTTACTGTTAAGAAGCAGTATTGCAATTTGTCCAGGAGATTGAAGCTTCTCATCCCAATGTTCGAAGAGATTAGGGACAGCAAAGAGATACTCCCTGAGGATACTCTCAAGGCTCTCGTATTGTTGAAAGAAGCTCTCGATTCGGCTAAGAAGTTGCTCAGATTTGGAAGCGATGGGAGCAAGATTTTCCTGGCCGTAGAGAGGGAGCAAATTATGAACAAATTTGAAGAGGTAACGGCTCGGTTGGAACAAGCTTTGGAAGGAATAGCCTACGATAAACTTGATATATCCGACGAAGTTAAAGAGCAGGTCGAGCTTGTTCTTGCTCAGTTCAGAAGAGCCAAAGGCAGGGTCGATGCACCTGACTCCGAGCTGTTGGATGATATCTTTGCTCTTTACAACACAAACAATGATTCTTCTGTAGATCAAGATTGCCTAAGGAGACTTTCTGAAAAATTACAGTTATTTGGAATATCCGACCTTACACAAGAGTCAATAGCTTTGCATGAGATGGTTACTGCTAGTGGAGGAGATCCAGGTGAGAGCATTGAGAAGATGGCAGGGATGCTGAAGAAAATAAAACATTTTGTGCAAACGGAGAACCTCGAAACGGACACTCCTGGTAGAGAAAAGACTCCTCCAGCAAGTTGTAGTGGACAAGTATCCAATGAGAAAAATAATAAGGCCCCAATTATACCAGATGATTTTCGATGCCCCATATCCCTGGAGTTGATGAGAGATCCTGTCATTGTTTCAACTGGACAGACCTATGAACGTTCCTGCATTGAGAAATGGCTTGAAGCAGGGCATGGGACGTGTCCGAAGACACAACAGAACCTTTCAAGCTCTACTCTTACCCCAAATTATGTGTTGCGTAGTCTTATAGCCCAGTGGTGTGAGGCTAATGGTATCGAACCACCAAAACGACCAAGCAGTGCTCGACCATGTAGAAGCTCATCATCTTGCTCCCCCGCTGAACGCACCAAGATTGATATTTTGCTTTGCAAGCTTGCATCTGGAAATCCTGAAGATCAACGATCTGCAGCTGGTGAAATCCGACTTCTTGCGAAGCGGAACGCAGATAATCGCGTTGCCATTGCTGAGGCTGGTGCGATACCTCTCCTTGTCGGCCTTCTTTCAACTCCAGACTCCCGTGTTCAAGAGCATGCTGTGACAGCACTTCTTAACCTTTCTATATGTGAGGACAACAAGGGAAGCATCATTTCCTCTGGGGCAGTTCCTGGTATCGTTCTCGTGCTCAAGAAGGGGAGCATGGAAGCGCGGGAGAATGCTGCAGCCACTCTTTTCAGCCTTTCGGTTGTGGACGAAAATAAAATTAGAATTGGTGCCTCTGGAGCTATCCCGCCGCTTGTTACGCTGCTTAGCGAAGGCACTCAAAGGGGTAAGAAAGATGCTGCAACTGCTCTTTTCAACTTGTGCATCTACCAAGGAAACAAGGGAAAGGCAGTAAGAGCTGGTGTAGTTCCAACCTTGATGCAGCTTCTCACCGAACCTGGAACCGGAATGGTGGATGAAGCCTTAGCCATCTTAGCAATACTCGCTAGCCATCCGGAAGGGAAAGCTGCCATTGGATCTGCAAAAGCAGTGCCGGTTTTGGTAAATGTTATTGGCACAGGATCCCCCAGGAACAGAGAGAATGCGGCTGCTGTTCTCGTGCATCTCTGCTCCGGAGACGAAAAACACCTAGTAGAGGCCAGGGATCTCGGAGTAATTAGCCCATTGTTAGATTTGGCAAACAATGGCACGGATAGAGGCAAGCGAAAAGCTGCACAGTTGATTGAGCGAATGAACCGACTCTTCGAGCACGCAGTGCAACTAGAGGAGATTCGGGTGCAATCGCCGGAGTCTCAACCTCTAAACCAGCCATCACAATCAACTTCTGCAACAGAAGTTGTCGGTAGCTGA 2004 47.06 MDEDNGALIQSLIDVVSEIAWISDFRLTVKKQYCNLSRRLKLLIPMFEEIRDSKEILPEDTLKALVLLKEALDSAKKLLRFGSDGSKIFLAVEREQIMNKFEEVTARLEQALEGIAYDKLDISDEVKEQVELVLAQFRRAKGRVDAPDSELLDDIFALYNTNNDSSVDQDCLRRLSEKLQLFGISDLTQESIALHEMVTASGGDPGESIEKMAGMLKKIKHFVQTENLETDTPGREKTPPASCSGQVSNEKNNKAPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQNLSSSTLTPNYVLRSLIAQWCEANGIEPPKRPSSARPCRSSSSCSPAERTKIDILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKIRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHPEGKAAIGSAKAVPVLVNVIGTGSPRNRENAAAVLVHLCSGDEKHLVEARDLGVISPLLDLANNGTDRGKRKAAQLIERMNRLFEHAVQLEEIRVQSPESQPLNQPSQSTSATEVVGS 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 47330852 47335223 - Hsped.10g12220.1 Hepe10g1222 581769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1222 667 MobiDBLite consensus disorder prediction 228 254 - -
Hepe10g1222 667 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 331 IPR013083 -
Hepe10g1222 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 Pfam U-box domain 258 328 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g1222 667 MobiDBLite consensus disorder prediction 237 253 - -
Hepe10g1222 667 Gene3D - 343 662 IPR011989 -
Hepe10g1222 667 FunFam RING-type E3 ubiquitin transferase 258 331 - -
Hepe10g1222 667 Pfam Armadillo/beta-catenin-like repeat 468 506 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 Pfam Armadillo/beta-catenin-like repeat 385 424 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 Pfam Armadillo/beta-catenin-like repeat 550 589 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 FunFam RING-type E3 ubiquitin transferase 340 635 - -
Hepe10g1222 667 SMART Ubox_2 261 324 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g1222 667 SUPERFAMILY ARM repeat 356 629 IPR016024 -
Hepe10g1222 667 CDD MLKL_NTD 10 138 - -
Hepe10g1222 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 396 438 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g1222 667 SUPERFAMILY RING/U-box 256 334 - -
Hepe10g1222 667 PANTHER U BOX DOMAIN-CONTAINING 29 630 - -
Hepe10g1222 667 CDD RING-Ubox_PUB 259 311 IPR045210 -
Hepe10g1222 667 MobiDBLite consensus disorder prediction 644 667 - -
Hepe10g1222 667 FunFam RING-type E3 ubiquitin transferase 5 118 - -
Hepe10g1222 667 Gene3D - 7 117 IPR036537 GO:0007166(InterPro)
Hepe10g1222 667 SMART arm_5 508 548 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 SMART arm_5 591 631 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 SMART arm_5 385 425 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 SMART arm_5 426 466 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 SMART arm_5 467 507 IPR000225 GO:0005515(InterPro)
Hepe10g1222 667 SMART arm_5 549 589 IPR000225 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1046 Hepe-Chr1:75165057 Hepe10g1222 Hepe-Chr10:47330852 3.31e-134 dispersed
Hepe02g2667 Hepe-Chr2:74293810 Hepe10g1222 Hepe-Chr10:47330852 2.07e-46 dispersed
Hepe04g1715 Hepe-Chr4:72229193 Hepe10g1222 Hepe-Chr10:47330852 4.45e-13 dispersed
Hepe07g2239 Hepe-Chr7:66798880 Hepe10g1222 Hepe-Chr10:47330852 5.95e-48 dispersed
Hepe08g1331 Hepe-Chr8:15233009 Hepe10g1222 Hepe-Chr10:47330852 1.10e-12 dispersed
Hepe08g1949 Hepe-Chr8:52935123 Hepe10g1222 Hepe-Chr10:47330852 2.01e-32 dispersed
Hepe09g0170 Hepe-Chr9:1354976 Hepe10g1222 Hepe-Chr10:47330852 3.57e-09 dispersed
Hepe09g1221 Hepe-Chr9:15368906 Hepe10g1222 Hepe-Chr10:47330852 2.36e-12 dispersed
Hepe09g1227 Hepe-Chr9:15748778 Hepe10g1222 Hepe-Chr10:47330852 8.52e-13 dispersed
Hepe10g0096 Hepe-Chr10:891512 Hepe10g1222 Hepe-Chr10:47330852 1.08e-34 dispersed
Hepe10g1222 Hepe-Chr10:47330852 Hepe10g1529 Hepe-Chr10:52040942 9.13e-36 dispersed
Hepe08g0340 Hepe-Chr8:3066365 Hepe10g1222 Hepe-Chr10:47330852 8.84e-90 transposed
Hepe08g1513 Hepe-Chr8:19068672 Hepe10g1222 Hepe-Chr10:47330852 7.84e-16 transposed
Hepe09g0778 Hepe-Chr9:7498162 Hepe10g1222 Hepe-Chr10:47330852 2.51e-16 transposed
Hepe10g1222 Hepe-Chr10:47330852 Hepe08g0796 Hepe-Chr8:7142474 2.37e-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1222 K27628 - csv:101218572 1119.76