Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1260 ATGCTTCTTTTTCTTCTTTTCTTTGCTCTCTTTGTCCTCCTCCTTTGCCTCCAATGGCACCTCCCCAAACATAAGCTCCTCCCTCCTGGCTCCATGGGCTGGCCTTACATAGGAGAAACCTTCAAACTCTACACCCAAAACCCCAATTCCTTCTTCTCCATTAGACAAAAAAGGTATGGGGATGTTTTTAAGACACATATATTGGGATGTCCATGTGTGATGATTTCAAGTCCAGAAGCTGCAAGAGTTGTGCTTGTGAGTAAAGCTCATTTGTTCAAGCCAACTTATCCACCAAGCAAAGAGAGAATGATTGGTCCTCAAGCTTTGTTCTTCCACCAAGGCCCTTACCATTCTCATCTTAAGAAACTTGTTCAAGCTTCTTTTTTGCCCTCTGCTATTAGGGCCTCTGTCTCTCAGATTGAGGACATTGTCCTCCACCTTCTCCCCTCTTGGAATGACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGTAATGATCTCGGCTTTTGGAGACCAACAAGACTTGGAAATAGAGAGAATCAAACATCTGTACCAATGCCTTGAAAAAGGCTACAATTCAATGCCTCTCGATCTTCCTGGAACCCCTTTTCGCAAAGCAATGAAGGCGAGGAGGTTGCTGAGTGAGACATTAGGGAAATTGATAGAGAAAAGACGGCGGAGCAAAGAACATGGAGGTGGGCTGCTGGCGGTGCTATTGGGCGGCGGCGGCGGCGGAGGAGGAGAGGAAGAGGAGAAAAACAAGCTGAGTGATTCACAAATAGCTGATAATATAATAGGAGTAATATTTGCAGCTCAAGACACGACCGCCAGTGTTTTAACATGGATTCTCAAGTACTTACACGACAACCAACATCTTCTCGAAGCTGTTAAGAAAGAGCAGGAAACAATTATTCAACGGAAAGTGTGCGAAGGGAACCGTCGGCTTACGTGGGATGATACCAGGCGCATGCCGTTAACCAATCGGGTGATACAAGAAACCCTAAGAAGGGCAAGTGTGGTGTCATTCACATTCAGAGAAGCAGTAGAAGAAGTTGAGTTTGAAGGATATGTAATCCCAAGAGGATGGAAAGTACTTCCGCTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAACTTTGATCCTTCAAGATTCGAGGTGGCACCGAGACCAAACACGTACATACCATTTGGAAATGGAGTGCACTCGTGTCCAGGCAGTGAAATGGCTAAGCTTGAAATGCTCGTTCTTCTCCACCACCTCACCACCACCTACAGATGGAAAGTGGTGGGAGAGGAATCTGGGATACAATACGGTCCATTTCCTGTGCCTAAAGATGGCTTACCCATAAAAGTATTTTCAAGGTAG 1398 45.49 MLLFLLFFALFVLLLCLQWHLPKHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSHLKKLVQASFLPSAIRASVSQIEDIVLHLLPSWNDSQINTLQQMKRFAFDVVMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARRLLSETLGKLIEKRRRSKEHGGGLLAVLLGGGGGGGGEEEEKNKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNQHLLEAVKKEQETIIQRKVCEGNRRLTWDDTRRMPLTNRVIQETLRRASVVSFTFREAVEEVEFEGYVIPRGWKVLPLFRTIHHSPDFFPHPENFDPSRFEVAPRPNTYIPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKDGLPIKVFSR 465
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 48077895 48085689 + Hsped.10g12600.1 Hepe10g1260 581807
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1260 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 CDD CYP90-like 55 463 - -
Hepe10g1260 465 Gene3D Cytochrome P450 20 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 FunFam Abscisic acid 8 18 464 - -
Hepe10g1260 465 SUPERFAMILY Cytochrome P450 22 465 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 Pfam Cytochrome P450 28 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1260 465 PANTHER CYTOCHROME P450 26 27 440 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0864 Hepe-Chr7:10900098 Hepe10g1260 Hepe-Chr10:48077895 1.77e-196 dispersed
Hepe08g1280 Hepe-Chr8:13982169 Hepe10g1260 Hepe-Chr10:48077895 1.05e-147 dispersed
Hepe10g0620 Hepe-Chr10:7700552 Hepe10g1260 Hepe-Chr10:48077895 3.04e-56 dispersed
Hepe10g1260 Hepe-Chr10:48077895 Hepe10g1973 Hepe-Chr10:56755433 1.04e-79 dispersed
Hepe10g1260 Hepe-Chr10:48077895 Hepe02g0585 Hepe-Chr2:5930217 2.57e-179 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1260 K09843 - csv:101216531 825.469