Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe10g1260 | ATGCTTCTTTTTCTTCTTTTCTTTGCTCTCTTTGTCCTCCTCCTTTGCCTCCAATGGCACCTCCCCAAACATAAGCTCCTCCCTCCTGGCTCCATGGGCTGGCCTTACATAGGAGAAACCTTCAAACTCTACACCCAAAACCCCAATTCCTTCTTCTCCATTAGACAAAAAAGGTATGGGGATGTTTTTAAGACACATATATTGGGATGTCCATGTGTGATGATTTCAAGTCCAGAAGCTGCAAGAGTTGTGCTTGTGAGTAAAGCTCATTTGTTCAAGCCAACTTATCCACCAAGCAAAGAGAGAATGATTGGTCCTCAAGCTTTGTTCTTCCACCAAGGCCCTTACCATTCTCATCTTAAGAAACTTGTTCAAGCTTCTTTTTTGCCCTCTGCTATTAGGGCCTCTGTCTCTCAGATTGAGGACATTGTCCTCCACCTTCTCCCCTCTTGGAATGACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGTAATGATCTCGGCTTTTGGAGACCAACAAGACTTGGAAATAGAGAGAATCAAACATCTGTACCAATGCCTTGAAAAAGGCTACAATTCAATGCCTCTCGATCTTCCTGGAACCCCTTTTCGCAAAGCAATGAAGGCGAGGAGGTTGCTGAGTGAGACATTAGGGAAATTGATAGAGAAAAGACGGCGGAGCAAAGAACATGGAGGTGGGCTGCTGGCGGTGCTATTGGGCGGCGGCGGCGGCGGAGGAGGAGAGGAAGAGGAGAAAAACAAGCTGAGTGATTCACAAATAGCTGATAATATAATAGGAGTAATATTTGCAGCTCAAGACACGACCGCCAGTGTTTTAACATGGATTCTCAAGTACTTACACGACAACCAACATCTTCTCGAAGCTGTTAAGAAAGAGCAGGAAACAATTATTCAACGGAAAGTGTGCGAAGGGAACCGTCGGCTTACGTGGGATGATACCAGGCGCATGCCGTTAACCAATCGGGTGATACAAGAAACCCTAAGAAGGGCAAGTGTGGTGTCATTCACATTCAGAGAAGCAGTAGAAGAAGTTGAGTTTGAAGGATATGTAATCCCAAGAGGATGGAAAGTACTTCCGCTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAACTTTGATCCTTCAAGATTCGAGGTGGCACCGAGACCAAACACGTACATACCATTTGGAAATGGAGTGCACTCGTGTCCAGGCAGTGAAATGGCTAAGCTTGAAATGCTCGTTCTTCTCCACCACCTCACCACCACCTACAGATGGAAAGTGGTGGGAGAGGAATCTGGGATACAATACGGTCCATTTCCTGTGCCTAAAGATGGCTTACCCATAAAAGTATTTTCAAGGTAG | 1398 | 45.49 | MLLFLLFFALFVLLLCLQWHLPKHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSHLKKLVQASFLPSAIRASVSQIEDIVLHLLPSWNDSQINTLQQMKRFAFDVVMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARRLLSETLGKLIEKRRRSKEHGGGLLAVLLGGGGGGGGEEEEKNKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNQHLLEAVKKEQETIIQRKVCEGNRRLTWDDTRRMPLTNRVIQETLRRASVVSFTFREAVEEVEFEGYVIPRGWKVLPLFRTIHHSPDFFPHPENFDPSRFEVAPRPNTYIPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESGIQYGPFPVPKDGLPIKVFSR | 465 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 48077895 | 48085689 | + | Hsped.10g12600.1 | Hepe10g1260 | 581807 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe10g1260 | 465 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 407 | 416 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 404 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 373 | 397 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 285 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 333 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 265 | 282 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 414 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | P450 superfamily signature | 414 | 425 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | P450 superfamily signature | 405 | 414 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | P450 superfamily signature | 334 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PRINTS | P450 superfamily signature | 276 | 293 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | CDD | CYP90-like | 55 | 463 | - | - | |
| Hepe10g1260 | 465 | Gene3D | Cytochrome P450 | 20 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | FunFam | Abscisic acid 8 | 18 | 464 | - | - | |
| Hepe10g1260 | 465 | SUPERFAMILY | Cytochrome P450 | 22 | 465 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | Pfam | Cytochrome P450 | 28 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1260 | 465 | PANTHER | CYTOCHROME P450 26 | 27 | 440 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe07g0864 | Hepe-Chr7:10900098 | Hepe10g1260 | Hepe-Chr10:48077895 | 1.77e-196 | dispersed | |
| Hepe08g1280 | Hepe-Chr8:13982169 | Hepe10g1260 | Hepe-Chr10:48077895 | 1.05e-147 | dispersed | |
| Hepe10g0620 | Hepe-Chr10:7700552 | Hepe10g1260 | Hepe-Chr10:48077895 | 3.04e-56 | dispersed | |
| Hepe10g1260 | Hepe-Chr10:48077895 | Hepe10g1973 | Hepe-Chr10:56755433 | 1.04e-79 | dispersed | |
| Hepe10g1260 | Hepe-Chr10:48077895 | Hepe02g0585 | Hepe-Chr2:5930217 | 2.57e-179 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe10g1260 | K09843 | - | csv:101216531 | 825.469 |