Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1271 ATGGCGGATATTTGCTGTAAAGTGATTAGTGAGAGTGAGGCGTCGTCGTCCTGCGAGCCCGACTCGCGAGTGGCTAGACGCCGGAGAATGGAGATCAGGAGGTGTAAATATGTTTCCGGAGTTGCTACCTCCGATACCGAGACTGCCGCGAAGCGGCAGAAGCTGGAGGAACTGTCTACGTCGCTTTCCAGAGACTGCGGTAACGCAGTCGAGAACTGTGATTCCAGAGAAGAAGAAGAGACCGTCGGGAGATTTGTGGCCGGAGACGTTCCGACGAGACAGCTGGCTCGGGCATCTCCCTCCGCTCCTTCTGCCGGAGTGATTCCGACGAGACAGACCTCGGTTGTTGTGTCGACTCCTCTGCGTCGGGAATCTCCCTCCGTTACTTTCGGCGGAGTGATTCCGAAGTTCGGATTCTCTTCCGTTTGTGGAAGGCGGAGAGATATGGAGGATGCGGTGGCCATTCATCCATCGCTCTGTTTTACAGACAAGGAAACCACCGATAAGTTGCACTTCTTCGGTGTTTACGACGGCCATGGCTGTTCTCATGTGGCGATGAAGTGTAAGGAGCGGCTGCACGACCTCGTGAAGGAAGAGTTGAATAAGAAGGAGAACGAAGAGGCCGCGGCCGCCGCGGCAGGGTGGGATGGCGCTATGAAGAAAATCTTCCGGCAAATGGACAGCGAAGTTGTGGTGCGAAAAACTGAAGAAGTTGTGGCTGCGAACTGTAGATGTGAACTTCAGTCGCCGGATTGCGATGCCGTCGGATCTACCGCCGTCGTAGCAGTTGTAACGAAGGATAAGGTCATCGTCGCCAACTGCGGCGATTCCAGAGCCGTTCTCTGCCGCGGCGGGAAGGCCATCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCTGACGAACTCATCCGGATTGAGGAAGCCGGCGGCCGAGTGATTTACTGGGACGGACCGAGAGTCCTCGGAGTTCTCGCGATGTCAAGAGCCATAGGTAAATAA 999 55.76 MADICCKVISESEASSSCEPDSRVARRRRMEIRRCKYVSGVATSDTETAAKRQKLEELSTSLSRDCGNAVENCDSREEEETVGRFVAGDVPTRQLARASPSAPSAGVIPTRQTSVVVSTPLRRESPSVTFGGVIPKFGFSSVCGRRRDMEDAVAIHPSLCFTDKETTDKLHFFGVYDGHGCSHVAMKCKERLHDLVKEELNKKENEEAAAAAAGWDGAMKKIFRQMDSEVVVRKTEEVVAANCRCELQSPDCDAVGSTAVVAVVTKDKVIVANCGDSRAVLCRGGKAIPLSSDHKPDRPDELIRIEEAGGRVIYWDGPRVLGVLAMSRAIGK 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 48221924 48224393 - Hsped.10g12710.1 Hepe10g1271 581818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1271 332 Gene3D - 132 332 IPR036457 -
Hepe10g1271 332 ProSiteProfiles PPM-type phosphatase domain profile. 136 332 IPR001932 -
Hepe10g1271 332 Coils Coil 186 209 - -
Hepe10g1271 332 CDD PP2Cc 136 331 IPR001932 -
Hepe10g1271 332 SMART PP2C_4 124 331 IPR001932 -
Hepe10g1271 332 ProSitePatterns PPM-type phosphatase domain signature. 172 180 IPR000222 GO:0043169(InterPro)
Hepe10g1271 332 Pfam Protein phosphatase 2C 137 331 IPR001932 -
Hepe10g1271 332 SUPERFAMILY PP2C-like 128 331 IPR036457 -
Hepe10g1271 332 PANTHER PROTEIN PHOSPHATASE 72 331 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0840 Hepe-Chr4:62640372 Hepe10g1271 Hepe-Chr10:48221924 5.95e-24 dispersed
Hepe09g0805 Hepe-Chr9:7890868 Hepe10g1271 Hepe-Chr10:48221924 2.87e-46 dispersed
Hepe10g1271 Hepe-Chr10:48221924 Hepe05g0665 Hepe-Chr5:11002837 6.15e-16 dispersed
Hepe10g1271 Hepe-Chr10:48221924 Hepe02g3358 Hepe-Chr2:83144466 1.93e-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1271 K14497 - csv:101206871 432.18