Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1271 | ATGGCGGATATTTGCTGTAAAGTGATTAGTGAGAGTGAGGCGTCGTCGTCCTGCGAGCCCGACTCGCGAGTGGCTAGACGCCGGAGAATGGAGATCAGGAGGTGTAAATATGTTTCCGGAGTTGCTACCTCCGATACCGAGACTGCCGCGAAGCGGCAGAAGCTGGAGGAACTGTCTACGTCGCTTTCCAGAGACTGCGGTAACGCAGTCGAGAACTGTGATTCCAGAGAAGAAGAAGAGACCGTCGGGAGATTTGTGGCCGGAGACGTTCCGACGAGACAGCTGGCTCGGGCATCTCCCTCCGCTCCTTCTGCCGGAGTGATTCCGACGAGACAGACCTCGGTTGTTGTGTCGACTCCTCTGCGTCGGGAATCTCCCTCCGTTACTTTCGGCGGAGTGATTCCGAAGTTCGGATTCTCTTCCGTTTGTGGAAGGCGGAGAGATATGGAGGATGCGGTGGCCATTCATCCATCGCTCTGTTTTACAGACAAGGAAACCACCGATAAGTTGCACTTCTTCGGTGTTTACGACGGCCATGGCTGTTCTCATGTGGCGATGAAGTGTAAGGAGCGGCTGCACGACCTCGTGAAGGAAGAGTTGAATAAGAAGGAGAACGAAGAGGCCGCGGCCGCCGCGGCAGGGTGGGATGGCGCTATGAAGAAAATCTTCCGGCAAATGGACAGCGAAGTTGTGGTGCGAAAAACTGAAGAAGTTGTGGCTGCGAACTGTAGATGTGAACTTCAGTCGCCGGATTGCGATGCCGTCGGATCTACCGCCGTCGTAGCAGTTGTAACGAAGGATAAGGTCATCGTCGCCAACTGCGGCGATTCCAGAGCCGTTCTCTGCCGCGGCGGGAAGGCCATCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCTGACGAACTCATCCGGATTGAGGAAGCCGGCGGCCGAGTGATTTACTGGGACGGACCGAGAGTCCTCGGAGTTCTCGCGATGTCAAGAGCCATAGGTAAATAA | 999 | 55.76 | MADICCKVISESEASSSCEPDSRVARRRRMEIRRCKYVSGVATSDTETAAKRQKLEELSTSLSRDCGNAVENCDSREEEETVGRFVAGDVPTRQLARASPSAPSAGVIPTRQTSVVVSTPLRRESPSVTFGGVIPKFGFSSVCGRRRDMEDAVAIHPSLCFTDKETTDKLHFFGVYDGHGCSHVAMKCKERLHDLVKEELNKKENEEAAAAAAGWDGAMKKIFRQMDSEVVVRKTEEVVAANCRCELQSPDCDAVGSTAVVAVVTKDKVIVANCGDSRAVLCRGGKAIPLSSDHKPDRPDELIRIEEAGGRVIYWDGPRVLGVLAMSRAIGK | 332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 48221924 | 48224393 | - | Hsped.10g12710.1 | Hepe10g1271 | 581818 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1271 | 332 | Gene3D | - | 132 | 332 | IPR036457 | - | |
Hepe10g1271 | 332 | ProSiteProfiles | PPM-type phosphatase domain profile. | 136 | 332 | IPR001932 | - | |
Hepe10g1271 | 332 | Coils | Coil | 186 | 209 | - | - | |
Hepe10g1271 | 332 | CDD | PP2Cc | 136 | 331 | IPR001932 | - | |
Hepe10g1271 | 332 | SMART | PP2C_4 | 124 | 331 | IPR001932 | - | |
Hepe10g1271 | 332 | ProSitePatterns | PPM-type phosphatase domain signature. | 172 | 180 | IPR000222 | GO:0043169(InterPro) | |
Hepe10g1271 | 332 | Pfam | Protein phosphatase 2C | 137 | 331 | IPR001932 | - | |
Hepe10g1271 | 332 | SUPERFAMILY | PP2C-like | 128 | 331 | IPR036457 | - | |
Hepe10g1271 | 332 | PANTHER | PROTEIN PHOSPHATASE | 72 | 331 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0840 | Hepe-Chr4:62640372 | Hepe10g1271 | Hepe-Chr10:48221924 | 5.95e-24 | dispersed | |
Hepe09g0805 | Hepe-Chr9:7890868 | Hepe10g1271 | Hepe-Chr10:48221924 | 2.87e-46 | dispersed | |
Hepe10g1271 | Hepe-Chr10:48221924 | Hepe05g0665 | Hepe-Chr5:11002837 | 6.15e-16 | dispersed | |
Hepe10g1271 | Hepe-Chr10:48221924 | Hepe02g3358 | Hepe-Chr2:83144466 | 1.93e-63 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1271 | K14497 | - | csv:101206871 | 432.18 |