Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1285 ATGCATATGGACTCCCCGCCGCCGCCGATGGGTCCCTCCGGCGACGACATGCACTCCCACGGGACGCCGTCGGCGATGCACATGACTTTCTTTTGGGGGAAAAACACCCAAGTTCTGTTCTCCGGCTGGCCTGGCGACCGGACCGGCATGTACTTGGTGGCGTTGGTGTTCGTCTTTTTGCTGGCGGTGGTCGTCGAGTGGCTGTCGCATTGGCGGCTGATGATGGAGCCGGGGCCGAGAAATGTCGCCGCCGGGATCGTGCAGACGGCGGTGCATGGGATTAGAATGGGAATCGCGTACATGGTGATGCTTGCTTTGATGTCGTTCAACGGCGGCGTTTTCATCGTCGCCGTCGCCGGTCATTCGGTTGGGTTTTTTGTTTTTGGGAGCAGAATTTTGAAGACGACGAAACAGTCGCCGGACGATCAGGGTACCGCCGATCTTCCATATAGGGTTTGTTGA 462 58.23 MHMDSPPPPMGPSGDDMHSHGTPSAMHMTFFWGKNTQVLFSGWPGDRTGMYLVALVFVFLLAVVVEWLSHWRLMMEPGPRNVAAGIVQTAVHGIRMGIAYMVMLALMSFNGGVFIVAVAGHSVGFFVFGSRILKTTKQSPDDQGTADLPYRVC 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 48511275 48511736 - Hsped.10g12850.1 Hepe10g1285 581832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1285 153 Pfam Ctr copper transporter family 28 75 IPR007274 GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro)
Hepe10g1285 153 Pfam Ctr copper transporter family 79 128 IPR007274 GO:0005375(InterPro)|GO:0016020(InterPro)|GO:0035434(InterPro)
Hepe10g1285 153 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 24 138 IPR007274 GO:0005375(PANTHER)|GO:0005375(InterPro)|GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0035434(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g1443 Hepe-Chr8:17324640 Hepe10g1285 Hepe-Chr10:48511275 7.22e-09 dispersed
Hepe08g1444 Hepe-Chr8:17356641 Hepe10g1285 Hepe-Chr10:48511275 6.46e-12 dispersed
Hepe10g1285 Hepe-Chr10:48511275 Hepe10g1287 Hepe-Chr10:48548358 9.51e-42 dispersed
Hepe10g1285 Hepe-Chr10:48511275 Hepe10g1286 Hepe-Chr10:48535318 1.00e-41 tandem
Hepe10g1285 Hepe-Chr10:48511275 Hepe04g0802 Hepe-Chr4:62075980 8.16e-35 wgd
Hepe10g1285 Hepe-Chr10:48511275 Hepe05g0131 Hepe-Chr5:1511200 3.94e-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1285 K14686 - csv:101214498 230.72