Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe10g1310 | ATGGCCAACGACGTCGTTTTTCTTTTCCCCTTTCCCTCTTTTTTTCTCATTCTTATTTTCACCTATTTGATTTGGTTTCATTTCCTCGCCCGGAAGCTGACCGGCCCGACGGTCTGGCCGCTCGTCGGCAGCCTCCCGGCTCTCTTCTCGAACCGGCGGAGACTCCACGACTGGATGGCCGGGAACCTCCGCGGCACAGGAGTCGCCGCCACGTACCAAACGTGCACGGTGGCGGTTCCATTCATCGCTAAAAAACAAGGATTCTACACAGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTGCGAACCCGGTTCGAAAACTACCCGAAAGGACCGGACTGGCAGGCGGCTTTTCACGATTTGTTGGGGCAGGGGATTTTCAACAGCGACGGCGAGATTTGGCTGATTCAGCGGAAGACGGCGGCGCTGGAGTTTACGACGAGGACGCTCCGGCAAGCGATGGACCGGTGGGTGAATCGGACGATAAAGACGCGACTTTGGTGCATTTTGGAGAAGGCGGCGGAGTATAAAACGGCGGTGGATTTGCAGGATTTGTTGCTCCGATTGACTTTTGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCTCAAACTTTGTCGCCGGAATTTTCTGAAAGTCCGTTCGCTTTGGCGTTTGATACTGCCACTGAGGCCACTCTTCACCGCCTTCTTTACCCTGGTCTTTTATGGAGGTTGGAGAAGCTTCTATGTATTGGAATGGAAAGAAGGTTAAAGAAGAGTCTTAAAGTGGTAGAAGACTACATAAACGACGCCGTTGCAGCCCGTAAACTAAATCCCTCCGACGACTTATTATCACGCTTCATGAATAAGAAGCACGACGGCGACCACTTCTCCGCCGCCGTCCTCCACCGCATCGCATTAAACTTCGTCCTCGCCGGCCGGGACACCTCCTCCGTGGCCCTCACGTGGTTCTTTTGGCTTGTAATGAACCACCCACACGTGGAGGAAAAAATCCTCTCTGAAATCTCAACCGTCCTCCGCCAGACACGTGGCGACAATCCACGTCGGTGGGTCGAAGAGCCGTTGGTGTTCGACGAGGCTGACAAATTGGTGTATTTGAAAGCCGCATTGGCCGAAACGCTGCGTTTATACCCGTCCGTACCGCAGGATTTCAAATATGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTTGTCCCGGCTGGTTCGACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTTGTGAATTTAAACCGGACCGGTGGTTGTCGCCGGATGGGGACCGGTTCGAGGGGCCGAAAGATGGGTATAAATTTGTGGCGTTTAATGCTGGACCAAGAACTTGTTTGGGGAAGGATTTGGCTTATTTGCAAATGAAGTCTGTCGCCTCCGCCGTGCTCCTCCGATACCGGCTGGCGCCGGTTCCCGGGCACCGGGTCGAACAAAAGATGTCTCTTACTCTTTTTATGAAGAATGGACTTCGGGTTTATTTGCATCCTCGCCGGCTCGGCTAG | 1548 | 53.17 | MANDVVFLFPFPSFFLILIFTYLIWFHFLARKLTGPTVWPLVGSLPALFSNRRRLHDWMAGNLRGTGVAATYQTCTVAVPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIKTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPEFSESPFALAFDTATEATLHRLLYPGLLWRLEKLLCIGMERRLKKSLKVVEDYINDAVAARKLNPSDDLLSRFMNKKHDGDHFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKILSEISTVLRQTRGDNPRRWVEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCCEFKPDRWLSPDGDRFEGPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG | 515 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 48957050 | 48959808 | + | Hsped.10g13100.1 | Hepe10g1310 | 581857 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe10g1310 | 515 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | E-class P450 group I signature | 369 | 387 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | E-class P450 group I signature | 296 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | P450 superfamily signature | 370 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | PANTHER | CYTOCHROME P450 | 23 | 505 | - | - | |
| Hepe10g1310 | 515 | FunFam | Cytochrome P450 | 27 | 514 | - | - | |
| Hepe10g1310 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe10g1310 | 515 | CDD | CYP86A | 75 | 505 | - | - | |
| Hepe10g1310 | 515 | Gene3D | Cytochrome P450 | 29 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | Pfam | Cytochrome P450 | 90 | 502 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1310 | 515 | SUPERFAMILY | Cytochrome P450 | 25 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g0561 | Hepe-Chr3:10977193 | Hepe10g1310 | Hepe-Chr10:48957050 | 3.55e-237 | dispersed | |
| Hepe03g1780 | Hepe-Chr3:74713231 | Hepe10g1310 | Hepe-Chr10:48957050 | 3.85e-82 | dispersed | |
| Hepe08g1776 | Hepe-Chr8:35653496 | Hepe10g1310 | Hepe-Chr10:48957050 | 1.10e-112 | dispersed | |
| Hepe10g1310 | Hepe-Chr10:48957050 | HepeContig68g0005 | Hepe-ChrContig68:438426 | 1.15e-108 | dispersed | |
| Hepe10g1310 | Hepe-Chr10:48957050 | Hepe06g1535 | Hepe-Chr6:66054091 | 5.61e-242 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe10g1310 | K15401 | - | csv:101214516 | 954.51 |