Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1310 ATGGCCAACGACGTCGTTTTTCTTTTCCCCTTTCCCTCTTTTTTTCTCATTCTTATTTTCACCTATTTGATTTGGTTTCATTTCCTCGCCCGGAAGCTGACCGGCCCGACGGTCTGGCCGCTCGTCGGCAGCCTCCCGGCTCTCTTCTCGAACCGGCGGAGACTCCACGACTGGATGGCCGGGAACCTCCGCGGCACAGGAGTCGCCGCCACGTACCAAACGTGCACGGTGGCGGTTCCATTCATCGCTAAAAAACAAGGATTCTACACAGTCACGTGCCACCCGAGAAACATCGAGCACGTGCTGCGAACCCGGTTCGAAAACTACCCGAAAGGACCGGACTGGCAGGCGGCTTTTCACGATTTGTTGGGGCAGGGGATTTTCAACAGCGACGGCGAGATTTGGCTGATTCAGCGGAAGACGGCGGCGCTGGAGTTTACGACGAGGACGCTCCGGCAAGCGATGGACCGGTGGGTGAATCGGACGATAAAGACGCGACTTTGGTGCATTTTGGAGAAGGCGGCGGAGTATAAAACGGCGGTGGATTTGCAGGATTTGTTGCTCCGATTGACTTTTGATAATATTTGTGGGCTGACTTTTGGGAAAGATCCTCAAACTTTGTCGCCGGAATTTTCTGAAAGTCCGTTCGCTTTGGCGTTTGATACTGCCACTGAGGCCACTCTTCACCGCCTTCTTTACCCTGGTCTTTTATGGAGGTTGGAGAAGCTTCTATGTATTGGAATGGAAAGAAGGTTAAAGAAGAGTCTTAAAGTGGTAGAAGACTACATAAACGACGCCGTTGCAGCCCGTAAACTAAATCCCTCCGACGACTTATTATCACGCTTCATGAATAAGAAGCACGACGGCGACCACTTCTCCGCCGCCGTCCTCCACCGCATCGCATTAAACTTCGTCCTCGCCGGCCGGGACACCTCCTCCGTGGCCCTCACGTGGTTCTTTTGGCTTGTAATGAACCACCCACACGTGGAGGAAAAAATCCTCTCTGAAATCTCAACCGTCCTCCGCCAGACACGTGGCGACAATCCACGTCGGTGGGTCGAAGAGCCGTTGGTGTTCGACGAGGCTGACAAATTGGTGTATTTGAAAGCCGCATTGGCCGAAACGCTGCGTTTATACCCGTCCGTACCGCAGGATTTCAAATATGTCGTGGCTGATGACGTGTTGCCAGATGGCACTTTTGTCCCGGCTGGTTCGACCGTGACGTATTCGATTTATTCGGTCGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTTGTGAATTTAAACCGGACCGGTGGTTGTCGCCGGATGGGGACCGGTTCGAGGGGCCGAAAGATGGGTATAAATTTGTGGCGTTTAATGCTGGACCAAGAACTTGTTTGGGGAAGGATTTGGCTTATTTGCAAATGAAGTCTGTCGCCTCCGCCGTGCTCCTCCGATACCGGCTGGCGCCGGTTCCCGGGCACCGGGTCGAACAAAAGATGTCTCTTACTCTTTTTATGAAGAATGGACTTCGGGTTTATTTGCATCCTCGCCGGCTCGGCTAG 1548 53.17 MANDVVFLFPFPSFFLILIFTYLIWFHFLARKLTGPTVWPLVGSLPALFSNRRRLHDWMAGNLRGTGVAATYQTCTVAVPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIKTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPEFSESPFALAFDTATEATLHRLLYPGLLWRLEKLLCIGMERRLKKSLKVVEDYINDAVAARKLNPSDDLLSRFMNKKHDGDHFSAAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKILSEISTVLRQTRGDNPRRWVEEPLVFDEADKLVYLKAALAETLRLYPSVPQDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCCEFKPDRWLSPDGDRFEGPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLAPVPGHRVEQKMSLTLFMKNGLRVYLHPRRLG 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 48957050 48959808 + Hsped.10g13100.1 Hepe10g1310 581857
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1310 515 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 PANTHER CYTOCHROME P450 23 505 - -
Hepe10g1310 515 FunFam Cytochrome P450 27 514 - -
Hepe10g1310 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe10g1310 515 CDD CYP86A 75 505 - -
Hepe10g1310 515 Gene3D Cytochrome P450 29 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 Pfam Cytochrome P450 90 502 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe10g1310 515 SUPERFAMILY Cytochrome P450 25 512 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0561 Hepe-Chr3:10977193 Hepe10g1310 Hepe-Chr10:48957050 3.55e-237 dispersed
Hepe03g1780 Hepe-Chr3:74713231 Hepe10g1310 Hepe-Chr10:48957050 3.85e-82 dispersed
Hepe08g1776 Hepe-Chr8:35653496 Hepe10g1310 Hepe-Chr10:48957050 1.10e-112 dispersed
Hepe10g1310 Hepe-Chr10:48957050 HepeContig68g0005 Hepe-ChrContig68:438426 1.15e-108 dispersed
Hepe10g1310 Hepe-Chr10:48957050 Hepe06g1535 Hepe-Chr6:66054091 5.61e-242 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1310 K15401 - csv:101214516 954.51