Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1335 ATGTCGGTCTCCGTCGCCGTTTCGAATTCGCCGGGATTTTCCCCTTCTTCCTCGATGTTCTGCAACAAGACGTCGATCATGTCACCGGCGCCGGAGGCGCTCACGCTGACCTTGGCCCATTTGAAGTCGTCTCAGGCTTCGTCGTCTTGCTCTTCGTCTCCTTCTTCCCCTTCTTCCCCTTTTCGGATTAGGTTTCCCAAGCCCCCTTCTGGACTTTCGGCGGTGGTGGCTTCTACTTCTTCTCCGTCGTCTTCGGCGTCGTCCAACGCTATCTTGAAGCGGAAGAGACCGTCGAGGTTGGATATTCCCTTGATGCCGTTGAGTTTTGGAGCTCCGGTGGCGCCGTCGCCGTCGTCGTCGAGGGAGGTGGTGGAAGCCGAGAGAGATGGGTTTTCTGTGTATTGCAAGAGAGGGAGGCGGAGAATTTCTATGGAAGATCGGTATTCTGCTGCCGTTGATCTTCGAGGCGATTCTAAAGAGGCGTTTTTTGGTGTATTTGATGGACATGGTGGTGCAAAGGCTGCAGAATTTGCAGCAAATAACTTGGAGAAGAACGTTTTGAATGAAATTGAAAGAACGACTGATTTTCAACAGGCCATTAAACATGCCTACCTCACCACAGATTCTGATTTCCTCAAGGAGGATCAACGCGGTGGCTCATGTTGTGTAACAGCTTTGATTAAGAAAGGCAACCTTGTCGTGTCCAACGCCGGTGACTGCCGTGCTGTTCTCAGCACCGAGGGCGTTGCCGAGGCTATCACCTCGGACCACCGCCCGTCCCGGGAAGACGAAAGGCACCGAATCGAGTCCACGGGTGGATATGTTGATTTGTGCAATGGCGTTTGGAGAGTCCAGGGATCTCTAGCTGTAACAAGAGGAATTGGTGATGCTCACCTCAAACAATGGGTGATAGCAGAGCCGGAAACGAGGGCGATTCGAATCGAGCCTCGACACGAGTTCTTGATCTTGGCCTCGGACGGGTTGTGGGAAACGGTGAGCAATCAAGAAGCAGTTGACATTGCTCATCCAATGTGTGTAGGAATTGAGAAGCCAGAGGCATTGGAGGCCTGTAAAAAGCTTGTGGAGCTATCTCTTTCAAGGGGCTCAGTTGATGACATTAGTGTAGTACTAATTCAATTGGCTAACTTCATTTAA 1155 51.43 MSVSVAVSNSPGFSPSSSMFCNKTSIMSPAPEALTLTLAHLKSSQASSSCSSSPSSPSSPFRIRFPKPPSGLSAVVASTSSPSSSASSNAILKRKRPSRLDIPLMPLSFGAPVAPSPSSSREVVEAERDGFSVYCKRGRRRISMEDRYSAAVDLRGDSKEAFFGVFDGHGGAKAAEFAANNLEKNVLNEIERTTDFQQAIKHAYLTTDSDFLKEDQRGGSCCVTALIKKGNLVVSNAGDCRAVLSTEGVAEAITSDHRPSREDERHRIESTGGYVDLCNGVWRVQGSLAVTRGIGDAHLKQWVIAEPETRAIRIEPRHEFLILASDGLWETVSNQEAVDIAHPMCVGIEKPEALEACKKLVELSLSRGSVDDISVVLIQLANFI 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 49448469 49450055 + Hsped.10g13350.1 Hepe10g1335 581882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1335 384 PANTHER PROTEIN PHOSPHATASE 120 378 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe10g1335 384 Gene3D - 131 383 IPR036457 -
Hepe10g1335 384 SMART PP2C_4 123 378 IPR001932 -
Hepe10g1335 384 MobiDBLite consensus disorder prediction 73 92 - -
Hepe10g1335 384 SUPERFAMILY PP2C-like 131 381 IPR036457 -
Hepe10g1335 384 ProSiteProfiles PPM-type phosphatase domain profile. 130 380 IPR001932 -
Hepe10g1335 384 ProSitePatterns PPM-type phosphatase domain signature. 162 170 IPR000222 GO:0043169(InterPro)
Hepe10g1335 384 SMART PP2C_SIG_2 139 380 IPR001932 -
Hepe10g1335 384 FunFam probable protein phosphatase 2C 25 123 383 - -
Hepe10g1335 384 MobiDBLite consensus disorder prediction 72 92 - -
Hepe10g1335 384 CDD PP2Cc 130 380 IPR001932 -
Hepe10g1335 384 Pfam Protein phosphatase 2C 135 373 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0707 Hepe-Chr1:69556491 Hepe10g1335 Hepe-Chr10:49448469 6.07e-115 dispersed
Hepe02g3473 Hepe-Chr2:84027039 Hepe10g1335 Hepe-Chr10:49448469 3.70e-82 dispersed
Hepe06g0898 Hepe-Chr6:56257293 Hepe10g1335 Hepe-Chr10:49448469 1.33e-24 dispersed
Hepe07g0048 Hepe-Chr7:497620 Hepe10g1335 Hepe-Chr10:49448469 1.36e-23 dispersed
Hepe07g0339 Hepe-Chr7:3402805 Hepe10g1335 Hepe-Chr10:49448469 3.75e-35 dispersed
Hepe08g0307 Hepe-Chr8:2764993 Hepe10g1335 Hepe-Chr10:49448469 4.50e-24 dispersed
Hepe10g0050 Hepe-Chr10:463067 Hepe10g1335 Hepe-Chr10:49448469 4.79e-72 dispersed
Hepe10g1335 Hepe-Chr10:49448469 Hepe01g1396 Hepe-Chr1:79193775 1.18e-39 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1335 K17506 - csv:101207841 627.861