Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1336 ATGGCAAAAACGATGACCAATTCCTGGACGAGAAGTAACTCTGTCATCGGAAAGGGCTCGTTCGGAACTGTGACTGTCGGAGTCGGAAAATCGGACGGCCGGATCTTTGCTGTGAAATCTGTCGAACAGAGTGTCGGATTCCGCCGCCAAATTGAGTGTTTAGAGAATGAAATTCGGATTCTTCGATCGTTGAATTCGCCGTACGTCGTGGGGTTTCTCGGCGACGATGTTTCTGATGAGTTTCCGACGATGTCGTTTCGAAATCTGCACATGGAGTATTTGCCAGGTGGCACCGTCGCCGATGACCCCACCGGCGCCGGCGACGAGAAGCTTTTACGGGCGAGGATATGGTGCATCGTTTCGGCTTTGAGTTATATTCATTCCAAAGGAATTGTCCATTGTGATGTTAAAGGGAGGAATATTCTGATTGGATTGAATCCGAGTTTTGTGAAATTGGCTGATTTCGGCTCTGCAATTGAAATTTCCGGCGCCGGAGACAGGTGTCGGGGTGCGGTGGCGCCACGTGGGAGTCCGCTGTGGATGGCACCGGAGGTGGTCCGGGGGGAATTTCAGGGGCCGGAATCGGACGTTTGGTCGGTTGGGTGTACGGTCATCGAAATGGTCACCGGAAAACCAGCGTGGGAAGATTTCGGGGCCGATACGCTGAGACGAATCGGATTTTCTGACGAGTTGCCAGAGTTTCCGACTCGGTTGTCGGAACTCGGCCAGGATTTTCTCCGGAAGTGTCTCAGAAGAGATCCGAGTGAGCGGTGGAGCTGTGATCGGCTGCTGCAGCATCCATTTTTGGCGGCAGTGGCGGCCTCACCGGAGATAGCCGGAGAGAATTCCCCTCGGTGCGTTCTTGACTGGGTCAACGCCAATTTCGACGAGGAGGAGGAGGAAGAAATCTCCATCTCCGGTCAATCCTCCGGCTACGGCGGCCGGGAAAGTGAGATCTCTGGCAAGGACAGAATTGGGAAATTGAGTACGAGTGAATGGCCGAATTGGGAATCTGACAGTTGGTCGCCGGTGAGAAGGTTCGGCAGTGAAGCGGCACCGGCGCCGGCGAACTGCGAAGAAGAAGAAGAGGAAGGGGTAGAATTGGAATATGGGATATGGAGAGGGGTAGAAGAGGAAATGGAGGGGACAAGTTCGGAATATTCGGAGTTTGTAAAGGACAATCACGGAAAATTAGGTGGCGAATATTCAAATCCCGGCGGTATGGAGATTCCGGAGCGGGCACGTAATAATTGTGGCGGCGATGGCGGTGGCGGTGGCGGTGGAATAGAGTGA 1293 53.67 MAKTMTNSWTRSNSVIGKGSFGTVTVGVGKSDGRIFAVKSVEQSVGFRRQIECLENEIRILRSLNSPYVVGFLGDDVSDEFPTMSFRNLHMEYLPGGTVADDPTGAGDEKLLRARIWCIVSALSYIHSKGIVHCDVKGRNILIGLNPSFVKLADFGSAIEISGAGDRCRGAVAPRGSPLWMAPEVVRGEFQGPESDVWSVGCTVIEMVTGKPAWEDFGADTLRRIGFSDELPEFPTRLSELGQDFLRKCLRRDPSERWSCDRLLQHPFLAAVAASPEIAGENSPRCVLDWVNANFDEEEEEEISISGQSSGYGGRESEISGKDRIGKLSTSEWPNWESDSWSPVRRFGSEAAPAPANCEEEEEEGVELEYGIWRGVEEEMEGTSSEYSEFVKDNHGKLGGEYSNPGGMEIPERARNNCGGDGGGGGGGIE 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 49487216 49488701 + Hsped.10g13360.1 Hepe10g1336 581883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1336 430 Gene3D Transferase(Phosphotransferase) domain 1 4 310 - -
Hepe10g1336 430 SUPERFAMILY Protein kinase-like (PK-like) 14 279 IPR011009 -
Hepe10g1336 430 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524(InterPro)
Hepe10g1336 430 Pfam Protein kinase domain 13 269 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1336 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1336 430 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 270 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe10g1336 430 SMART serkin_6 10 269 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1336 430 MobiDBLite consensus disorder prediction 299 324 - -
Hepe10g1336 430 ProSiteProfiles Protein kinase domain profile. 10 269 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1336 430 CDD STKc_MAPKKK 8 269 - -
Hepe10g1336 430 MobiDBLite consensus disorder prediction 393 430 - -
Hepe10g1336 430 FunFam Serine threonine protein kinase putative 7 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1749 Hepe-Chr4:72521792 Hepe10g1336 Hepe-Chr10:49487216 3.50e-62 dispersed
Hepe08g0454 Hepe-Chr8:3987877 Hepe10g1336 Hepe-Chr10:49487216 3.61e-58 dispersed
Hepe10g0698 Hepe-Chr10:9319327 Hepe10g1336 Hepe-Chr10:49487216 4.35e-38 dispersed
Hepe10g1336 Hepe-Chr10:49487216 Hepe03g0008 Hepe-Chr3:112109 1.08e-15 dispersed
Hepe10g1336 Hepe-Chr10:49487216 Hepe01g1260 Hepe-Chr1:77888707 8.82e-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73184 PF00069 Pkinase 1.80E-53 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1336 - - - 0.0