Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1341 ATGTTTGTTTCTCATCAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTGTGTTGGCTTACCAAAGTCTTGGAGTTGTTTATGGTGACCTCAGCACTTCCCCTCTATATGTTTACAAAACTACCTTCTCTGGGAAATTGAGTCTCCATGAGAATGATGAAGAGATTTTTGGGGTTCTATCCTTCATCTTCTGGACATTTACACTCATTGCCCTCTTCAAATATGTTTTCATCGTCATGTCAGCCGACGATAATGGTGAAGGGGGTACCTTTGCACTGTACTCTCTTCTCTGCAGGCATGCTAGATTATGCATTCTACCGAATCAAGAGCCTGTCGATGAAAAGTTATCTGCATATGACATGACGGGAATCTCGGAGACGAGGCCGAGTGCTGCTCTAAAGTCTTTTTTTCAGCTGCATCCGTCTTTTCGAAGAGGTTTTTTGGTGTTTGTTCTCTTTGGAACCTCTATGGCTATTGGTGATGGAGTGCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTATGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGACTGTTCTCCCTTCAGCATCGGGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGGCATGGCTTCTCTGTATTAGCGTTATCGGAATGTATAATATTATCAAGTGGAATCCTCGTATATATCATGCGCTCTCTCCAGTTTATATGCTAAAGTTCCTTAGAAGCACAGGCGTAGAAGGTTGGATTTCATTAGGCGGAGTCGTTCTCTCGATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCTTCGCTTTCAATTAAGATTGCCTTCACATTTCTTGTATATCCCTCCTTGATCCTTGCTTATTTGGGTGAGGCTGCATTTCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCGGTGTTCGTAGTGGCCACTTTTGCTTCTGTCATAGGAAGTCAGGCTGTGATTTCGGCTACATTCTCCCTCGTAAACCAGTGCTGTGCTCTGAATTGCTTCCCCCATGTGAAAATTATGCACACTTCAAACCAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACCATTGGCTTGAGAGACACAAACATGATAGGCCATGCATATGGGCTGGCCGTCACCTTTGTTATGTTTGTCTCAACTTGCTTGATGGCACTTGTGATACTAGTTGTTTGGAAGCAGAGGTTGATCAATGCCATAGCGTTTTTCATGTTTTTCGGGTCAATCGAATTACTTTACATCTCGGCATCAATCAGCAAAGTTCATGAAGGCGGGTGGATCCCGCTCGTGTTTTCTATGATCTTTATGTGTTCGATGTATACATGGTACTACGGGACAATGAAGAAACACGAATACGACGATGAGAACAAAGTGTCAATGAATAGGATACTTTCTTCAGGGCCTAGCCTCGGAATAGTGCGTGTACCCGGAATTGGACTCATATACACTAATCTGGTCACTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTTCTTGTATTTGTTTGTATAAAATACATTCAAGTTCCCCATATCGACGAAGAAGATCGTTTGGTCATTACAAGGGTGGGGCCGAAAGAATGCGACATGTTTCGGTGCATCGTTAGGTATGGTTATCGGGATTTGCTACAAGAAAACTACGATTTCGAGAACAGATTGGTGTTTTCTCTAGTGCATTATGTAGAAACAGAAGATCACCTTTGGAAACCAAAGTCACAAGTCTCTGGAGGGTGTGAAAATTCAGAAGAAGAACCTTGTGAATATGAACCATTGGAGCAGGCTTTTTCAAGCTCAAATATGTTGCAGTCTTCCCACGAAGATCAAGCAACCAACACCGCAGTCGACGATCGGGAGAAGTCTGTACATAACGAGGAAGCGATGCAGATATTGAGAGCGAAAGAATCGGGAATCACGTACATTTTCGGACATTGCTCAATGAAGGCCAAGAAATCATCCTCCATTTTCAAGAAGTTGGCCATTGATATTGTGTATGCTTTTTTGAACCAGAATTGCAGAGAGCCTGAGGTTCTTCTGAATGTGCCTCACACTTCTCTCTTGGAAGTTGGCATGGTATATTATGTATAG 2244 42.65 MFVSHQNVKNESYRSVLVLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIFGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEKLSAYDMTGISETRPSAALKSFFQLHPSFRRGFLVFVLFGTSMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIITAWLLCISVIGMYNIIKWNPRIYHALSPVYMLKFLRSTGVEGWISLGGVVLSITGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVIGSQAVISATFSLVNQCCALNCFPHVKIMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTFVMFVSTCLMALVILVVWKQRLINAIAFFMFFGSIELLYISASISKVHEGGWIPLVFSMIFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLVTGVPAVFGHFVTTLPAFHQVLVFVCIKYIQVPHIDEEDRLVITRVGPKECDMFRCIVRYGYRDLLQENYDFENRLVFSLVHYVETEDHLWKPKSQVSGGCENSEEEPCEYEPLEQAFSSSNMLQSSHEDQATNTAVDDREKSVHNEEAMQILRAKESGITYIFGHCSMKAKKSSSIFKKLAIDIVYAFLNQNCREPEVLLNVPHTSLLEVGMVYYV 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 49528496 49533758 + Hsped.10g13410.1 Hepe10g1341 581888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1341 747 Pfam K+ potassium transporter C-terminal domain 521 745 IPR053952 -
Hepe10g1341 747 NCBIfam potassium uptake protein 19 747 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Hepe10g1341 747 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 7 747 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Hepe10g1341 747 Pfam K+ potassium transporter integral membrane domain 19 510 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3114 Hepe-Chr2:80295510 Hepe10g1341 Hepe-Chr10:49528496 2.33e-277 dispersed
Hepe10g0001 Hepe-Chr10:61371 Hepe10g1341 Hepe-Chr10:49528496 1.48e-218 dispersed
Hepe10g1341 Hepe-Chr10:49528496 Hepe10g1654 Hepe-Chr10:53220084 4.67e-275 dispersed
Hepe10g1341 Hepe-Chr10:49528496 Hepe02g1864 Hepe-Chr2:29218984 8.23e-281 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1341 K03549 - csv:101222845 1344.72