Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1354 ATGTCGACGATCGAGAACCCCGAGCTGGTCTGTGTCACCGGCGGCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGTGGCTACTCCGTTCACGCCACCGTCCAAAATCTCAGTTACACTCTCACTCTCATCTTTCTCTTCATTCTTTTCAATATTAACTTCCGCTTCTTCTTACCATTTCGATTTCCGCATGAAAATAATGCAGAGGATGACAAAGAAACGAAGCATCTCCAAGATTTAGAAGGAGCGGATGCTCGTCTTCGTCTCTTCCAAATCGATCTCCTCGATTACGACTCCATTCTCTCCGCCGTCACTGGTTGCGCCGGCGTCTTCCACGTCGCGTCTCCCTGCATCGTTGATGCTGTAGAAGATCCCGAGAGGGATTTACTGGATCCGGCTATCAAAGGAACGATCAACGTCCTGACGGCGGCTAAGGAGGCTGGGGTACAACGCGTAGTGGTAACTTCTTCAATCTCCGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAAGAGTGAAGAATGTTGGACTGATATTGATTACTGCAAGCGAAATGGACTGTGGTATTCGGTTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGAATTTGCCAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGAACAGTGATGGGCCCTGTGATTGCTCCCAGAATTAATGCAAGCATGCAAATGCTTTTAAAACTTCTCGAGGGGTGCATTGAGACATTCGCGGACGTCTTTATCGGAGTAGTGCATTTTAAAGATGTTGCATTAGCACATATTTTGGTCTATGAAAACAAATCAGCGACAGGAAGACACCTTTGTGCTGAGGCCATAGCTGGTTACTCTGACTATGTCGCGAAGGTTGCTGAACTCTTCCCTCAATATAAGGTCCCGAGGTCGATAGAAGATGCACAACCTGATTTGGCAAGATCAAAAGATGGAGGTAAGAAGTTGATGAACCTGGGACTGGAATTCATCCCAATGGAAGAAATCCTCAAGGACGCCGTTGAGGATCTAAAGAAGAAGGGATATATTTCCTGA 1071 47.53 MSTIENPELVCVTGGSGCIGSWLVHLLLLRGYSVHATVQNLSYTLTLIFLFILFNINFRFFLPFRFPHENNAEDDKETKHLQDLEGADARLRLFQIDLLDYDSILSAVTGCAGVFHVASPCIVDAVEDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVKSEECWTDIDYCKRNGLWYSVSKTLAEKAAWEFAKEKGLDVVVINPGTVMGPVIAPRINASMQMLLKLLEGCIETFADVFIGVVHFKDVALAHILVYENKSATGRHLCAEAIAGYSDYVAKVAELFPQYKVPRSIEDAQPDLARSKDGGKKLMNLGLEFIPMEEILKDAVEDLKKKGYIS 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 49771651 49775519 - Hsped.10g13540.1 Hepe10g1354 581901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1354 356 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 347 IPR050425 GO:0016616(PANTHER)
Hepe10g1354 356 Gene3D - 2 356 - -
Hepe10g1354 356 CDD FR_SDR_e 10 333 - -
Hepe10g1354 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 353 IPR036291 -
Hepe10g1354 356 Pfam NAD dependent epimerase/dehydratase family 84 277 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0560 Hepe-Chr7:6006051 Hepe10g1354 Hepe-Chr10:49771651 1.19e-102 dispersed
Hepe08g0360 Hepe-Chr8:3241114 Hepe10g1354 Hepe-Chr10:49771651 2.76e-63 dispersed
Hepe10g1354 Hepe-Chr10:49771651 Hepe03g1662 Hepe-Chr3:73479061 4.11e-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1354 - - - 0.0