Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1377 ATGGCCACCTTCAAAATGGAGATGTTAATATTGGGGTTAGTTTTGATGGGGACTTATTGCATAGGTAGCTCCTCAGCTCAACTCTCCACAAATTTTTACCTTAGGAAGTGCCCTCAGCTTCTCACTACCGTCAACTCCATCCTTAAAGCTCAAGTCTCGAAGGAACGACGCATCGGAGCTTCTCTTCTTCGCCTCCACTTCCACGACTGCTTCGTCAACGGGTGCGATGGGTCCGTGCTGTTAGAGGACCGTGGTTCATTCAAAGGAGAGCATACTGCAGCTCCCAACAATAACTCACTCAGAGGTTTCAATGTGATCGATCAAATTAAGTCTAGGGTTGAGAAGTTGTGTCCTGGCGTGGTGTCGTGTGCTGACATATTGACCGTCGCTGCTCGTGATTCTGTTGCACTGCTTGGAGGTCCGTATTGGGATGTTAAACTTGGGCGAAGAGATTCGAAAACCGCAAGCTTTTCTGATGCAAATAGCGGAGTCCTCCCTTCACCATTCTCCAAACTCTCTGTTCTTGTGTCGAGATTTAAAGATCAGGGCCTTTCTGTTACCGACTTGGTCGCTCTCTCTGGAGCGCACACGATCGGAGTAGCAAGATGCGGGATGTTCAGACAACGCATATACGGCGAGCGCAATATCGACGCAGCGTTTGCAAAGAGGAGACAGCAGCAATGTCCAAGAAGAGAGAATTCAGGCGACAACAATCTTGCTCCATTTGACTTCCAAACGCCAATGGTATTTGACAACAAATATTTCAGCAACCTTGTTCAGAAGAAGGGGCTGCTGCATTCGGATCAAGTGCTGTTTTCCGGTGGGTCTTCCGCCACAGAGTCTTTGGTTAGAAAGTACAGCAGAAACAATGCGGCCTTCGATGGGGACTTTGTTAGAGCCATGGTTAAGATGGCAGATATCCAACCCCTCACTGGCTCCAAGGGAGAGATTAGAAGAGTCTGCGGGAGGCCCAATTAA 978 48.57 MATFKMEMLILGLVLMGTYCIGSSSAQLSTNFYLRKCPQLLTTVNSILKAQVSKERRIGASLLRLHFHDCFVNGCDGSVLLEDRGSFKGEHTAAPNNNSLRGFNVIDQIKSRVEKLCPGVVSCADILTVAARDSVALLGGPYWDVKLGRRDSKTASFSDANSGVLPSPFSKLSVLVSRFKDQGLSVTDLVALSGAHTIGVARCGMFRQRIYGERNIDAAFAKRRQQQCPRRENSGDNNLAPFDFQTPMVFDNKYFSNLVQKKGLLHSDQVLFSGGSSATESLVRKYSRNNAAFDGDFVRAMVKMADIQPLTGSKGEIRRVCGRPN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50136096 50137504 + Hsped.10g13770.1 Hepe10g1377 581924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1377 325 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe10g1377 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Hepe10g1377 325 Gene3D Peroxidase, domain 2 166 304 - -
Hepe10g1377 325 FunFam Peroxidase 31 180 - -
Hepe10g1377 325 PANTHER PEROXIDASE 72-RELATED 16 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 FunFam Peroxidase 166 304 - -
Hepe10g1377 325 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Hepe10g1377 325 Pfam Peroxidase 44 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1377 325 Gene3D - 31 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0081 Hepe-Chr8:635614 Hepe10g1377 Hepe-Chr10:50136096 1.60e-88 dispersed
Hepe08g0688 Hepe-Chr8:6198786 Hepe10g1377 Hepe-Chr10:50136096 1.11e-140 dispersed
Hepe08g0689 Hepe-Chr8:6213770 Hepe10g1377 Hepe-Chr10:50136096 1.53e-141 dispersed
Hepe08g0691 Hepe-Chr8:6233095 Hepe10g1377 Hepe-Chr10:50136096 1.25e-110 dispersed
Hepe08g1063 Hepe-Chr8:10324944 Hepe10g1377 Hepe-Chr10:50136096 1.10e-81 dispersed
Hepe10g1377 Hepe-Chr10:50136096 HepeContig65g0027 Hepe-ChrContig65:3130350 1.12e-68 dispersed
Hepe09g1787 Hepe-Chr9:56162130 Hepe10g1377 Hepe-Chr10:50136096 1.13e-88 transposed
Hepe10g1377 Hepe-Chr10:50136096 Hepe04g1303 Hepe-Chr4:68627512 7.08e-56 wgd
Hepe10g1377 Hepe-Chr10:50136096 Hepe08g0687 Hepe-Chr8:6189940 3.21e-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1377 K00430 - mdm:103447309 422.935