Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1387 ATGCAAGATCCGGCGTCGAATCCCGATCTCGATCCCTCCGCCTCCAACAATGCAAACACTCATCTCCCGCCGCCGCCCTCCACTAGACCGCACCACCGCAGGGCCCACTCTGAACTCACCTTCCGCTTCCCCGATGACCTCATGGATCTCTCTTCCTCCGATCCCTTCAATTCTGGATCCGCCGCCCTCCCTCTCGACGAGATCGGATCTGAGGACGACCTCTTTTCCACCTACATTGACGTCGACAAGCTTGCTTCCGGCACTTGTGCACTAGATCACTCCGCTAATGCTGAATCCGAGAAGACTCCTAGACCAAGGCATAGATATAGCAGCTCTGTCGATGGTTCCACCTCTACCAGTGTGTTTGGGGATGTATTGGACGCCAAGAAAGCCATGCCTCCTGATAAATTAGCTGAGCTTTGGACTCTTGATCCCAAACGTGCCAAAAGGATTTTGGCCAATCGGCAGTCTGCTACCCGTTCTAAAGAGAGGAAGGTACGATACATACAGGAACTTGAACGCAAAGTTCAGACCCTTCAAACAGAGGCGACAACTCTTTCAGCTCAACTCATGCTGTTCCAGAGAGATACGACAGGTCTTAGTACTGAAAATACAGAACTTAAGTTTCGGTTGCAGGCTACAGAGCAACAAGCTCATTTGCGAGATGCTTTGAATGAAGCACTAAAGAAAGAAGTTGAGAGGCTCAAAGTTGCCACTGGAGAGACATCAGGCGCCTGTGATTCCTTCAACTTGGGAATAATGTCTCAGATGCCATATCTAGCATCGAGTTTCTTTCCCCTTCATCATCAGCAACCAGGTTCTGCTGGCACCCAGAACAACATACAGTTGCCATTATATGGTCATTCCTCATCAAACATGTCAATCCATCCTCTACATCATCAGTCGAATTCACATCAATTCTTTGATATAATGCAGAGTGATCCTCTCGGTCGATTACAGGGTCTCGATATCGGTAGCAATGAATCTCCTCTCGTGAAATCAGAAGTCCCCTCTCTTTCTGCTAGTGAAAGTAGCGCCACATTTTGA 1047 48.71 MQDPASNPDLDPSASNNANTHLPPPPSTRPHHRRAHSELTFRFPDDLMDLSSSDPFNSGSAALPLDEIGSEDDLFSTYIDVDKLASGTCALDHSANAESEKTPRPRHRYSSSVDGSTSTSVFGDVLDAKKAMPPDKLAELWTLDPKRAKRILANRQSATRSKERKVRYIQELERKVQTLQTEATTLSAQLMLFQRDTTGLSTENTELKFRLQATEQQAHLRDALNEALKKEVERLKVATGETSGACDSFNLGIMSQMPYLASSFFPLHHQQPGSAGTQNNIQLPLYGHSSSNMSIHPLHHQSNSHQFFDIMQSDPLGRLQGLDIGSNESPLVKSEVPSLSASESSATF 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50227677 50232051 - Hsped.10g13870.1 Hepe10g1387 581934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1387 348 Coils Coil 162 189 - -
Hepe10g1387 348 Gene3D - 145 196 - -
Hepe10g1387 348 MobiDBLite consensus disorder prediction 1 38 - -
Hepe10g1387 348 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 144 207 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1387 348 SUPERFAMILY Leucine zipper domain 146 197 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1387 348 FunFam probable transcription factor PosF21 145 198 - -
Hepe10g1387 348 Coils Coil 221 241 - -
Hepe10g1387 348 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 20 302 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe10g1387 348 MobiDBLite consensus disorder prediction 1 22 - -
Hepe10g1387 348 CDD bZIP_plant_RF2 147 196 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1387 348 SMART brlzneu 142 206 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1387 348 Pfam bZIP transcription factor 146 192 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe10g1387 348 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g1299 Hepe-Chr5:61089221 Hepe10g1387 Hepe-Chr10:50227677 8.84e-53 dispersed
Hepe05g1302 Hepe-Chr5:61127996 Hepe10g1387 Hepe-Chr10:50227677 3.63e-52 dispersed
Hepe01g0646 Hepe-Chr1:68392417 Hepe10g1387 Hepe-Chr10:50227677 2.86e-98 transposed
Hepe02g2790 Hepe-Chr2:76820424 Hepe10g1387 Hepe-Chr10:50227677 1.11e-49 transposed
Hepe10g1972 Hepe-Chr10:56752364 Hepe10g1387 Hepe-Chr10:50227677 8.03e-52 transposed
Hepe10g1387 Hepe-Chr10:50227677 Hepe08g0680 Hepe-Chr8:6113069 1.16e-119 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56521 PF00170 bZIP_1 9.10E-09 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1387 - - - 0.0