Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1389 | ATGGCCTCCCACCGCTGCATCAACACTTCTTGCGGAGCCGCCACGCCTCACGATTGGACCAAAGGATGGCCTCTCGGATCCGCCGGATTCGCTCATCTCTGCCTCAACTGCGGATCTGCTTATGAAAATTTAGTCTTCTGTGATACATTTCACTTAGAGGAAACTGGTTGGAGGGATTGCAGATTTTGTGGCAAGAGAATCCACTGTGGATGTATAGCTTCTAAGTCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGTACTAGCTGTGTGAAAAGATCTCGACTTGATGTGATCCGGAGAGATGAAATTTCTAATGGCTTTGAGGGAGTGGCAGTTGGTAATGTTGGCCTTCTGCGACCTGCTTCTGTTGAGGATCGAGTGGTTCGAAATGGCATTAACGAGGAAAAGCTTTTACAGTTGTGTAACATCATGGAGGCAAATGAAACCAACCGTTTTCAGCAATCTCAAAGAGTTGACAGAAGCGCATCTCCTGCACAAAACAAAGGAGAAAATCTCAGGAGCCCATTTGGGGAAGTTGGAACAAGCTTTTTTAATATGACTAAACTACCTGTTAAATGCCAGCCATCTGTTGGTTCAATAACATATTCCAAACTAGATACTAGCAGACCACACTTAGAACTAAACGATATGCAAGAATCTCTAAGTCAGCCGTCGTTAAATAGAACTTTGGTAGTTCCATTTGGTACACCGAACTTTGTGGTACCCTTTTCAGGAAGTGCTGCTGAAGAGGATGAAAAGAGCATTCTGCCATTTCAACAGGGCCAAAAATCTCGTCTAATTTTTCCCAAGCCCTTAAAAACTGGGATCACAGTTAATTCAGAAACAAGAAAGGGAATGTCTCCTCTGGTGCGTATTGCTCGGCCACCTGCTGAAGGTCGGGGTAAGAACCAACTTCTTCCGAGGTACTGGCCAAGGATTACTGACCAAGAGCTAGAACAATTATCTGGAGATTTGAATTCTACTATTGTTCCACTCTTTGAAAAGGTGCTGAGTGCTAGTGATGCTGGTCGAATTGGTCGTTTGGTTCTGCCGAAAGCATGTGCTGAAGCATATTTTCCCCCTATCTCTCAATCAGAAGGCCTTCCTGTTAGGATTCAAGATGTGAAGGGGAATGAATGGACGTTTCAGTTCAGATTTTGGCCCAACAACAACAGCAGAATGTATGTTTTGGAGGGCGTTACCCCTTGCATACAGTCCATGCAATTACAAGCTGGTGATACTGTCACTTTTAGTCGGATAGACCCTGGAGGTCAATTAGTCATGGGATTTCGAAAATCAACAATTTCCACTGATATACAGGATGCCAAGATCTCTACACTTCCCAATGGCTCTCATTCGGGTGACGCTTCATTCTCTGGGGTCTTTCAGAATTTAGCTTTAAGAGCTGAAAGAGATATTAGTTTGCATAAAAGTGAAAATTTTGGGGGGAGGACAAATGATGCTTCAGGACAACAACCACTGTTAACCATGGAGAAGAAAGTGGCTCGAAACATTGGGTCTAAAAATAAGAGGTTGCTCATGCATAGTGAAGATGCTTTGGAGTTAAGACTCACTTGGGAAGAAGCTCAAGATCTACTCCGCCCTCCACCAAGTGCAAATCCCACCATTGTCACTATCGACGACCATGAGTTCGAAGAGTATGATGAACCTCCAGTTTTTGGCAAGAGGACTATATTCACTGTCCGTCCAACTGGGGAACAGAAACAATGGGCTCAGTGTGATGATTGCTCAAAATGGCGGAGGTTGCCTGTGGATGTTCTTCTCCCTCCAAAGTGGACTTGTTCAGATAATGTTTGGGATTTGAGCAGGTGTACATGTTCTGCACCAGAAGAGATCAGCACAAAGGAACAGGAGAATCTTCTAAGAGCGAATAAAGATTTTAAGAAACGTAAAACCATAAAGAGCCAGAAGTATGCTCAAGAACTCGAGCCTTCTGGTTTGGATGCGCTGGCCAGTGCTGCTGTTCTGGGTGATTGTATGGCTGACTTGCAGGAATCAGGTACAACGACTAGACATCCTCGACACCGACCAGGATGCACTTGCATTGTGTGCATTCAGCCTCCAAGTGGGAAGGGAAAGCATAAATCCACATGCACATGCAATGTATGCTTGACTGTAAAACGCCGTTTTAAAACACTCATGCTGCGCAAGAAGAAACGCCAATCAGAACGTGAAGTGGAGACTCTGCTCAAGGATGGGAATCCACAATTCGATGAATCAGGAACGAGCAGGACACTTAGGGGTACATCTCTGCAAACAAACCATTCAGAGAACGAAGGAAGTCAGAGCAGGATAAAAGATGAGGAGGCTGCAAATAGCAGTGGGAAAATTGACTTGAACTGCCACCCTGACCGTGAGGACATGCAACTGGAGGTAGCAGGATTAAGCATGATGAGTCTTGTTGAGGCTGCCAGCCAACCTTTAGATAGCTATTCAAAGCAAATCGGCGTCTCCAGCATCACGAGTGTGCAGCAGTCCAGTCAACCAAGTAGCGTGGAGAGTGAGAGACGCCTGTCCGATGAAGTGTTTCATGGATCAGGACAGGAGAGCACAAGTGATGGATGCAGAGAGCCCCATTGA | 2607 | 45.3 | MASHRCINTSCGAATPHDWTKGWPLGSAGFAHLCLNCGSAYENLVFCDTFHLEETGWRDCRFCGKRIHCGCIASKSMFECLDYGGIGCTSCVKRSRLDVIRRDEISNGFEGVAVGNVGLLRPASVEDRVVRNGINEEKLLQLCNIMEANETNRFQQSQRVDRSASPAQNKGENLRSPFGEVGTSFFNMTKLPVKCQPSVGSITYSKLDTSRPHLELNDMQESLSQPSLNRTLVVPFGTPNFVVPFSGSAAEEDEKSILPFQQGQKSRLIFPKPLKTGITVNSETRKGMSPLVRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPVRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRIDPGGQLVMGFRKSTISTDIQDAKISTLPNGSHSGDASFSGVFQNLALRAERDISLHKSENFGGRTNDASGQQPLLTMEKKVARNIGSKNKRLLMHSEDALELRLTWEEAQDLLRPPPSANPTIVTIDDHEFEEYDEPPVFGKRTIFTVRPTGEQKQWAQCDDCSKWRRLPVDVLLPPKWTCSDNVWDLSRCTCSAPEEISTKEQENLLRANKDFKKRKTIKSQKYAQELEPSGLDALASAAVLGDCMADLQESGTTTRHPRHRPGCTCIVCIQPPSGKGKHKSTCTCNVCLTVKRRFKTLMLRKKKRQSEREVETLLKDGNPQFDESGTSRTLRGTSLQTNHSENEGSQSRIKDEEAANSSGKIDLNCHPDREDMQLEVAGLSMMSLVEAASQPLDSYSKQIGVSSITSVQQSSQPSSVESERRLSDEVFHGSGQESTSDGCREPH | 868 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 50239285 | 50246814 | - | Hsped.10g13890.1 | Hepe10g1389 | 581936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 154 | 174 | - | - | |
Hepe10g1389 | 868 | Gene3D | - | 570 | 622 | - | - | |
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 744 | 768 | - | - | |
Hepe10g1389 | 868 | SMART | B3_2 | 335 | 435 | IPR003340 | GO:0003677(InterPro) | |
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 827 | 868 | - | - | |
Hepe10g1389 | 868 | Gene3D | - | 313 | 438 | IPR015300 | - | |
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 769 | 792 | - | - | |
Hepe10g1389 | 868 | Pfam | CW-type Zinc Finger | 578 | 621 | IPR011124 | GO:0008270(InterPro) | |
Hepe10g1389 | 868 | CDD | B3_DNA | 333 | 434 | IPR003340 | GO:0003677(InterPro) | |
Hepe10g1389 | 868 | ProSiteProfiles | B3 DNA-binding domain profile. | 335 | 436 | IPR003340 | GO:0003677(InterPro) | |
Hepe10g1389 | 868 | Pfam | B3 DNA binding domain | 335 | 434 | IPR003340 | GO:0003677(InterPro) | |
Hepe10g1389 | 868 | SUPERFAMILY | DNA-binding pseudobarrel domain | 332 | 438 | IPR015300 | - | |
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 827 | 842 | - | - | |
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 730 | 792 | - | - | |
Hepe10g1389 | 868 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 | 1 | 843 | - | - | |
Hepe10g1389 | 868 | FunFam | B3 domain-containing transcription repressor VAL1 | 313 | 440 | - | - | |
Hepe10g1389 | 868 | ProSiteProfiles | Zinc finger CW-type profile. | 573 | 623 | IPR011124 | GO:0008270(InterPro) | |
Hepe10g1389 | 868 | MobiDBLite | consensus disorder prediction | 154 | 172 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1819 | Hepe-Chr4:73127000 | Hepe10g1389 | Hepe-Chr10:50239285 | 6.53e-185 | dispersed | |
Hepe03g1262 | Hepe-Chr3:67871458 | Hepe10g1389 | Hepe-Chr10:50239285 | 9.88e-16 | transposed | |
Hepe10g1389 | Hepe-Chr10:50239285 | Hepe05g0023 | Hepe-Chr5:256968 | 5.88e-232 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56522 | PF02362 | B3 | 2.00E-16 | CL0405 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1389 | K09287 | - | csv:101214226 | 1406.73 |