Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1389 ATGGCCTCCCACCGCTGCATCAACACTTCTTGCGGAGCCGCCACGCCTCACGATTGGACCAAAGGATGGCCTCTCGGATCCGCCGGATTCGCTCATCTCTGCCTCAACTGCGGATCTGCTTATGAAAATTTAGTCTTCTGTGATACATTTCACTTAGAGGAAACTGGTTGGAGGGATTGCAGATTTTGTGGCAAGAGAATCCACTGTGGATGTATAGCTTCTAAGTCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGTACTAGCTGTGTGAAAAGATCTCGACTTGATGTGATCCGGAGAGATGAAATTTCTAATGGCTTTGAGGGAGTGGCAGTTGGTAATGTTGGCCTTCTGCGACCTGCTTCTGTTGAGGATCGAGTGGTTCGAAATGGCATTAACGAGGAAAAGCTTTTACAGTTGTGTAACATCATGGAGGCAAATGAAACCAACCGTTTTCAGCAATCTCAAAGAGTTGACAGAAGCGCATCTCCTGCACAAAACAAAGGAGAAAATCTCAGGAGCCCATTTGGGGAAGTTGGAACAAGCTTTTTTAATATGACTAAACTACCTGTTAAATGCCAGCCATCTGTTGGTTCAATAACATATTCCAAACTAGATACTAGCAGACCACACTTAGAACTAAACGATATGCAAGAATCTCTAAGTCAGCCGTCGTTAAATAGAACTTTGGTAGTTCCATTTGGTACACCGAACTTTGTGGTACCCTTTTCAGGAAGTGCTGCTGAAGAGGATGAAAAGAGCATTCTGCCATTTCAACAGGGCCAAAAATCTCGTCTAATTTTTCCCAAGCCCTTAAAAACTGGGATCACAGTTAATTCAGAAACAAGAAAGGGAATGTCTCCTCTGGTGCGTATTGCTCGGCCACCTGCTGAAGGTCGGGGTAAGAACCAACTTCTTCCGAGGTACTGGCCAAGGATTACTGACCAAGAGCTAGAACAATTATCTGGAGATTTGAATTCTACTATTGTTCCACTCTTTGAAAAGGTGCTGAGTGCTAGTGATGCTGGTCGAATTGGTCGTTTGGTTCTGCCGAAAGCATGTGCTGAAGCATATTTTCCCCCTATCTCTCAATCAGAAGGCCTTCCTGTTAGGATTCAAGATGTGAAGGGGAATGAATGGACGTTTCAGTTCAGATTTTGGCCCAACAACAACAGCAGAATGTATGTTTTGGAGGGCGTTACCCCTTGCATACAGTCCATGCAATTACAAGCTGGTGATACTGTCACTTTTAGTCGGATAGACCCTGGAGGTCAATTAGTCATGGGATTTCGAAAATCAACAATTTCCACTGATATACAGGATGCCAAGATCTCTACACTTCCCAATGGCTCTCATTCGGGTGACGCTTCATTCTCTGGGGTCTTTCAGAATTTAGCTTTAAGAGCTGAAAGAGATATTAGTTTGCATAAAAGTGAAAATTTTGGGGGGAGGACAAATGATGCTTCAGGACAACAACCACTGTTAACCATGGAGAAGAAAGTGGCTCGAAACATTGGGTCTAAAAATAAGAGGTTGCTCATGCATAGTGAAGATGCTTTGGAGTTAAGACTCACTTGGGAAGAAGCTCAAGATCTACTCCGCCCTCCACCAAGTGCAAATCCCACCATTGTCACTATCGACGACCATGAGTTCGAAGAGTATGATGAACCTCCAGTTTTTGGCAAGAGGACTATATTCACTGTCCGTCCAACTGGGGAACAGAAACAATGGGCTCAGTGTGATGATTGCTCAAAATGGCGGAGGTTGCCTGTGGATGTTCTTCTCCCTCCAAAGTGGACTTGTTCAGATAATGTTTGGGATTTGAGCAGGTGTACATGTTCTGCACCAGAAGAGATCAGCACAAAGGAACAGGAGAATCTTCTAAGAGCGAATAAAGATTTTAAGAAACGTAAAACCATAAAGAGCCAGAAGTATGCTCAAGAACTCGAGCCTTCTGGTTTGGATGCGCTGGCCAGTGCTGCTGTTCTGGGTGATTGTATGGCTGACTTGCAGGAATCAGGTACAACGACTAGACATCCTCGACACCGACCAGGATGCACTTGCATTGTGTGCATTCAGCCTCCAAGTGGGAAGGGAAAGCATAAATCCACATGCACATGCAATGTATGCTTGACTGTAAAACGCCGTTTTAAAACACTCATGCTGCGCAAGAAGAAACGCCAATCAGAACGTGAAGTGGAGACTCTGCTCAAGGATGGGAATCCACAATTCGATGAATCAGGAACGAGCAGGACACTTAGGGGTACATCTCTGCAAACAAACCATTCAGAGAACGAAGGAAGTCAGAGCAGGATAAAAGATGAGGAGGCTGCAAATAGCAGTGGGAAAATTGACTTGAACTGCCACCCTGACCGTGAGGACATGCAACTGGAGGTAGCAGGATTAAGCATGATGAGTCTTGTTGAGGCTGCCAGCCAACCTTTAGATAGCTATTCAAAGCAAATCGGCGTCTCCAGCATCACGAGTGTGCAGCAGTCCAGTCAACCAAGTAGCGTGGAGAGTGAGAGACGCCTGTCCGATGAAGTGTTTCATGGATCAGGACAGGAGAGCACAAGTGATGGATGCAGAGAGCCCCATTGA 2607 45.3 MASHRCINTSCGAATPHDWTKGWPLGSAGFAHLCLNCGSAYENLVFCDTFHLEETGWRDCRFCGKRIHCGCIASKSMFECLDYGGIGCTSCVKRSRLDVIRRDEISNGFEGVAVGNVGLLRPASVEDRVVRNGINEEKLLQLCNIMEANETNRFQQSQRVDRSASPAQNKGENLRSPFGEVGTSFFNMTKLPVKCQPSVGSITYSKLDTSRPHLELNDMQESLSQPSLNRTLVVPFGTPNFVVPFSGSAAEEDEKSILPFQQGQKSRLIFPKPLKTGITVNSETRKGMSPLVRIARPPAEGRGKNQLLPRYWPRITDQELEQLSGDLNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPVRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRIDPGGQLVMGFRKSTISTDIQDAKISTLPNGSHSGDASFSGVFQNLALRAERDISLHKSENFGGRTNDASGQQPLLTMEKKVARNIGSKNKRLLMHSEDALELRLTWEEAQDLLRPPPSANPTIVTIDDHEFEEYDEPPVFGKRTIFTVRPTGEQKQWAQCDDCSKWRRLPVDVLLPPKWTCSDNVWDLSRCTCSAPEEISTKEQENLLRANKDFKKRKTIKSQKYAQELEPSGLDALASAAVLGDCMADLQESGTTTRHPRHRPGCTCIVCIQPPSGKGKHKSTCTCNVCLTVKRRFKTLMLRKKKRQSEREVETLLKDGNPQFDESGTSRTLRGTSLQTNHSENEGSQSRIKDEEAANSSGKIDLNCHPDREDMQLEVAGLSMMSLVEAASQPLDSYSKQIGVSSITSVQQSSQPSSVESERRLSDEVFHGSGQESTSDGCREPH 868
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50239285 50246814 - Hsped.10g13890.1 Hepe10g1389 581936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1389 868 MobiDBLite consensus disorder prediction 154 174 - -
Hepe10g1389 868 Gene3D - 570 622 - -
Hepe10g1389 868 MobiDBLite consensus disorder prediction 744 768 - -
Hepe10g1389 868 SMART B3_2 335 435 IPR003340 GO:0003677(InterPro)
Hepe10g1389 868 MobiDBLite consensus disorder prediction 827 868 - -
Hepe10g1389 868 Gene3D - 313 438 IPR015300 -
Hepe10g1389 868 MobiDBLite consensus disorder prediction 769 792 - -
Hepe10g1389 868 Pfam CW-type Zinc Finger 578 621 IPR011124 GO:0008270(InterPro)
Hepe10g1389 868 CDD B3_DNA 333 434 IPR003340 GO:0003677(InterPro)
Hepe10g1389 868 ProSiteProfiles B3 DNA-binding domain profile. 335 436 IPR003340 GO:0003677(InterPro)
Hepe10g1389 868 Pfam B3 DNA binding domain 335 434 IPR003340 GO:0003677(InterPro)
Hepe10g1389 868 SUPERFAMILY DNA-binding pseudobarrel domain 332 438 IPR015300 -
Hepe10g1389 868 MobiDBLite consensus disorder prediction 827 842 - -
Hepe10g1389 868 MobiDBLite consensus disorder prediction 730 792 - -
Hepe10g1389 868 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 843 - -
Hepe10g1389 868 FunFam B3 domain-containing transcription repressor VAL1 313 440 - -
Hepe10g1389 868 ProSiteProfiles Zinc finger CW-type profile. 573 623 IPR011124 GO:0008270(InterPro)
Hepe10g1389 868 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1819 Hepe-Chr4:73127000 Hepe10g1389 Hepe-Chr10:50239285 6.53e-185 dispersed
Hepe03g1262 Hepe-Chr3:67871458 Hepe10g1389 Hepe-Chr10:50239285 9.88e-16 transposed
Hepe10g1389 Hepe-Chr10:50239285 Hepe05g0023 Hepe-Chr5:256968 5.88e-232 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56522 PF02362 B3 2.00E-16 CL0405 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1389 K09287 - csv:101214226 1406.73