Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe10g1390 | ATGAGCGCCAGAGCAAGAGCTTATACATCTTCTGCTCCAAGTTTTAGAGGAGTTCCATACACCATGGATCTTCTCCTGTTGGAGAAGGCTCTGCTGGGGTTGTTCGTGGCCATGGTTGTTGCTATTACCATATCCAAGGTGCGGGGAAAGCGTTTTAAACTCCCACCAGGTCCCATTCCCATACCGATATTTGGAAATTGGCTGCAGGTGGGCGATGACTTGAACCACCGCAACCTGACAGGGCTGGCGAGAAAGTTCGGGGACATACTGATGCTGAGAATGGGGCAGCGAAACCTAGTGGTGGTTTCCTCAGCGGAGCTGGCGAAGGAAGTGCTGCACACCCAGGGAGTGGAATTCGGGTCGAGGACCAGGAACGTGGTGTTCGATATATTCACGGACAAGGGTCAGGACATGGTGTTCACCGTGTACGGAGAGCACTGGAGGAAAATGAGACGAATCATGACCGTCCCCTTTTTCACCAACAAGGTGGTGCAGCAGAACAGATTGGGTTGGGAGGAGGAGGCTGCCAGAGTTGTGGAGGATCTGAAGAACAATCCAGAGGCTTCCACGAGCGGCGTGGTTCTGAGGAGGCGGCTGCAGCTTCTGATGTATAACAATATGTACAGGATTATGTTTGACAGGAGATTCGACAGCATGGAGGATCCTCTGTTCAACAAGCTCAAGCTTATTAACGCAGAGAGGAGTCGGCTATCTCAAAGCTTTGAATACAACTACGGCGATTTCATCCCCATACTCAGGCCTTTTCTCAGAAGGTATTTGAATGTGTGCAAGGACGTCAAGGAGAGGAGGCTCAAGCTCTTCAAGGACCATTTTGTCGACGAGAGGAGGAGACTGACAAGCACGATGAGCGACGAGGCTGGTGTCAAATGTGCCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAAATCACCGAAGACAATGTTCTCTTCATTGTTGAGAACATCAATGTTGCCGCGATTGAGACAACATTGTGGTCCATGGAGTGGGCTGTTGCTGAGCTTGTCAACCACCCCAACATCCAGAAAAAGCTGAGGGACGAGCTCGATTCGGTGCTCGGAGATGGCATCCAGATTACGGAGCCCGACATTCAGAATCTGCCTTACCTGCAGGCTGTTATCAAAGAGACCATGCGGTTGAGAATGGCCATTCCTCTCCTAGTGCCTCACATGAACCTCAAAGACGCCAAGTTGGCTGGTTATGACATCCCTGCAGAGAGCAAGATTCTGGTGAATGCCTGGTGGCTGGCCAACAACCCTGATCACTGGAACAAACCCGAAGAATTCCGACCTGAGAGGTTCTTGGAGGAGGAAGCCAACGTGGAGGCCAGCGGGAACGACTTTAGATACCTTCCCTTCGGCGCGGGGAGGAGGAGCTGCCCCGGCATCGTTCTCGCCTTGCCCATCGTTGCTATTACTTTGGGTCGTCTCATTCAGAATTTTGAGCTCCTGCCTCCTCCTGGACAGTCAAAGATTGATACCACTGAAAAGCCTGGACAATTCAGCCTGCAAATATTGAACCACTCTACCATTGTGGCAAAGCCAAGGTCCTTGTGA | 1578 | 51.27 | MSARARAYTSSAPSFRGVPYTMDLLLLEKALLGLFVAMVVAITISKVRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLTGLARKFGDILMLRMGQRNLVVVSSAELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQNRLGWEEEAARVVEDLKNNPEASTSGVVLRRRLQLLMYNNMYRIMFDRRFDSMEDPLFNKLKLINAERSRLSQSFEYNYGDFIPILRPFLRRYLNVCKDVKERRLKLFKDHFVDERRRLTSTMSDEAGVKCAIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAVAELVNHPNIQKKLRDELDSVLGDGIQITEPDIQNLPYLQAVIKETMRLRMAIPLLVPHMNLKDAKLAGYDIPAESKILVNAWWLANNPDHWNKPEEFRPERFLEEEANVEASGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPPGQSKIDTTEKPGQFSLQILNHSTIVAKPRSL | 525 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 50253681 | 50255831 | - | Hsped.10g13900.1 | Hepe10g1390 | 581937 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe10g1390 | 525 | SUPERFAMILY | Cytochrome P450 | 55 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | Pfam | Cytochrome P450 | 55 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 22 | 524 | - | GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER) | |
| Hepe10g1390 | 525 | Gene3D | Cytochrome P450 | 40 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 107 | 128 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 315 | 332 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 202 | 220 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 335 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 378 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | FunFam | Trans-cinnamate 4-monooxygenase | 44 | 517 | - | - | |
| Hepe10g1390 | 525 | CDD | CYP73 | 84 | 516 | - | - | |
| Hepe10g1390 | 525 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | PRINTS | P450 superfamily signature | 326 | 343 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe10g1390 | 525 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe10g1390 | Hepe-Chr10:50253681 | Hepe10g1571 | Hepe-Chr10:52437193 | 7.07e-71 | dispersed | |
| Hepe10g1390 | Hepe-Chr10:50253681 | Hepe08g0678 | Hepe-Chr8:6087622 | 8.46e-310 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe10g1390 | K00487 | - | csv:101208511 | 922.154 |