Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1392 ATGAAGCCGCACATCTGCACCCTTTCTCATTTCCTTCTTCTCCATATCTCCGTCTCCACCGCAACCCACGCCGGCACGCCGTCCTCTGCTCTGCTGCAGCCGCACGGCTGCCCATCGCTTTCTTTTACAACAGCTAATCGCCGAGGAATCATGGCGGACGAAATTCCGAATGATGTGATTGATCAGGTGGCAGATATTGCCCCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTTCAGGATCTGGCTGATGAGTCTGTTGACAAGTTAGTAGAGAAAACTGAAAGTTTGTCAGTTTCTGAAAGTTTGGAGCCTACCACATTCTCTGGACTTAAAAAGAAGAAGAAGAAACCAGTAGAGGCTAATTCCTTGAATGACGATGGTGTAGATGTCACGGAGGATTTGGAAGATCAAGCGGGGGAGAATGAAGAACAAGAGGGAATTGTTCTACAGTATCGTCATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAACATTCTTAGAGAGAATAATCCAGAGCTTGCTGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGGCAGCCAGACCATGTTATGGCTTTCTTATTGGCGGAACTGGGAACCAGTGGATCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAATTTTGAAGGAATTCTGCGTCGTTATGTCAATGAATATGTTATTTGCATTGGGTGCAAGAGTCCAGACACTATCCTCTCAAAGGAGAATCGACTCTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCTGGGGCATGA 963 45.59 MKPHICTLSHFLLLHISVSTATHAGTPSSALLQPHGCPSLSFTTANRRGIMADEIPNDVIDQVADIAPFDPTKKKKKKKVVLQDLADESVDKLVEKTESLSVSESLEPTTFSGLKKKKKKPVEANSLNDDGVDVTEDLEDQAGENEEQEGIVLQYRHPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGA 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50263598 50272312 - Hsped.10g13920.1 Hepe10g1392 581939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1392 320 Pfam Domain found in IF2B/IF5 189 298 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe10g1392 320 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 269 304 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe10g1392 320 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 165 272 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe10g1392 320 MobiDBLite consensus disorder prediction 96 134 - -
Hepe10g1392 320 Gene3D - 163 305 - -
Hepe10g1392 320 MobiDBLite consensus disorder prediction 111 126 - -
Hepe10g1392 320 FunFam Eukaryotic translation initiation factor 2 subunit 163 305 - -
Hepe10g1392 320 SMART eIF2Bneu4 190 299 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe10g1392 320 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 75 307 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1392 K03238 - csv:101220978 494.967