Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1396 ATGTTTCGATCACCGGAGTGGGCACATGCAGCCCTTCTACTCCTCTGCTTCTCCTCCTCCTCCTCCTTACTACTACTTGTCGGTGCTGCAGACCCGGTTACCCACCCCTCCGAAGTGAACGCTTTGCTCGAGATCAAGAAAAGTTTAATAGATCGTAATCAGAATCTGAGCAACTGGAACAGAGGAGACCCTTGTATTTCAAATTGGACTGGTGTTCTGTGCTACAATACCACATTGGATGATAGCTTTCTACATGTTGTTGAATTGCAACTTCTAAATATGAGTTTAGCAGGAAATTTATCACCTGCGCTTGGTCGTTTGTCTCAGCTGAAAGTTTTGGACTTTATGTGGAATGAGATAAATGGGGGAATACCAAGAGAGATAGGCAATCTAACGTCCTTAGAACTGTTGCTTCTGAACGGGAACCAGTTGTCAGGTTCATTGCCTGAAGATCTTGGGAATCTTCTACATTTAGACAGAATACAGATTGACCAGAACTTCATATCAGGACCAATACCTAAGACATTTGCAAAGTTAAAAGCAACAAAGCATTTCCACATGAACAACAATTCTATCAGTGGTGAAATCCCATCTGAGCTATCTGGATTGCCCAATCTTGTCCACTTCCTTCTTGACAATAACAACTTATCGGGGAGACTTCCACCAGAGTTGTTTCAGTTGCCAAACCTAGAAATACTTCAACTTGACAACAACAACTTCAGCGGGTCCACAATACCAGATTCTTATGGAAATATGACTAAATTGCTGAAACTGAGTCTAAGGAACTGTAGCTTGCAAGGACCAATTCCTGATCTGAGTAGAATAATGAACCTCGGTTATCTAGATCTAAGTTCCAATCAACTAAGTGGACTCATACCAGGAAGTAAACTTTCTGAGAATATCACAACCATCATTTTATCCAACAACCAGCTTACTGGCACCATACCATCCAGTCTTTCGGATCTACCACATCTTCAGAAATTGTCAATTGCAAATAATACATTGAACGGCTCTGTTCCATCCACCATATGGCAAAGCAGGACGTTCAATTCTTTGGACAGCCTTACAGTAGAGCTGCAGAACAATAATTTTTCAAATATTTTGGGAAGCATCGATCTCCCTCTGAATGTCACTGTCTGGCTTCATGGAAATCCTGCTTGTTCTAATATCAGCCTGGTGGACTTTTGTGGAACTGAGAGTGAGGTTATAATTGACATTCCAACAAATAACACTCTTGGGTGTTCTGCAGTATGCCCACCTTCTTATGAATGTTACTCAGCAAAATGTCCCTCATCTTGTGTCTGTTCTGCACCTCTTCTTATTGGATATCGTTTGAAGAGTCCCGGATTCTCACGTTTTAGTCCATATCAACGTATGTTTGAGGAGTATCTGACCAATGGTCTTAAGTTAAACCTTGAACAATTGGACATTGGTTCTCCTGAGTGGCAAAAAGGACCTCGATTAAAAATGAACCTGAAGCTTTTCCCTCTATATGTTGCTGATAGCAATAGTTCTCACATGTTCAATGACAGCGAGGTTGTACGAATTGTTTCCAAGTTTACCAATTGGAAAATTCAAGATAGTGATATATTTGGACCATATGAACTTCTCAGCTTGACAATATCAGACGTTTATAAAAACGTATTTCTTACACCATCATCTAATCCTACTATGAGTAAAGGGGCATTGGCTGGAATAATATTAGGAGCAATTTTTGGCGGAGCAACGTTATCTGCAATTGTTTTTATTTTTATTATAAGATCACGTGTAAAGGGCCGCCACATCTCAAGAAAGCGTCACTTGTCAAAAACTGCCTTAAAGATTGAGGGCATAAAGGAGTTTGGTTACCGTGAAACGGCTCTAGCTACAAACAATTTTCATGATTCCACGGTAGTTGGTCAAGGTGGTTATGGAAAGGTTTACAAAGGAATTCTAGCAGATAGCACAGCTGTTGCTATCAAACGTGCACAGGAGGGCTCACTACAGGGTGAAAAAGAGTTCCTAACTGAAATACAATTATTGTCGAGGTTACACCACCGAAATCTTGTGGCTTTGATTGGATATTGTGATGAAGAAGGGGAGCAGATGTTGGTTTATGAGTTTATGTCAAATGGCACGCTGAGGGATCACCTTTCTGTAAATTCTGCAGAACCTTTGAGTTTTGCCACAAGATTAAAAGCTGCCCTGGGTGCAGCTAAGGGAATTCTGTACCTGCACACGGAAGCCGATCCTCCAATATTTCACCGAGATATCAAGTCCAGCAACATATTATTAGACTCCAAATATATGGCAAAGGTTGCTGATTTTGGACTTTCACGACTTGCACCTCTGCCAGATACAGATGGCGATGTGCCTGCTCATGTATCAACAGTAGTAAAAGGGACACCGGTTAAGGGTGCACATCAGTCCGGAAAATTTTTCTCGATAATTGATGGTCGCCTGGGATCTTATCCCGCTGAATGTGTGGAAAGGTTTGTGACATTGGCTCTGAAGTGTTGCCAAGATGACACCGATGCACGCCCTTCAATGGCAGAAGTTGTTCGAACACTCGAAACTATCTGGCTTATGCTGCCCGAGTGTGATAGGAAAATTGCAGCGCCTTTGATCGCGGATGTCATAAAAGTGACCAGTCCCCCATCTTCATCATCCAACATGAACAACTATTACATATCAGAGGTTTCTGGCAGTGACCTTCTCAGTGTCGCCGGCGCCTCTCTCCGGTTCAGTGCTGCCGCCGTTGCCGTCGTCAATCTTCTGCTCGTGCCTCCGCAGCCTCCCTCCTAG 2784 42.6 MFRSPEWAHAALLLLCFSSSSSLLLLVGAADPVTHPSEVNALLEIKKSLIDRNQNLSNWNRGDPCISNWTGVLCYNTTLDDSFLHVVELQLLNMSLAGNLSPALGRLSQLKVLDFMWNEINGGIPREIGNLTSLELLLLNGNQLSGSLPEDLGNLLHLDRIQIDQNFISGPIPKTFAKLKATKHFHMNNNSISGEIPSELSGLPNLVHFLLDNNNLSGRLPPELFQLPNLEILQLDNNNFSGSTIPDSYGNMTKLLKLSLRNCSLQGPIPDLSRIMNLGYLDLSSNQLSGLIPGSKLSENITTIILSNNQLTGTIPSSLSDLPHLQKLSIANNTLNGSVPSTIWQSRTFNSLDSLTVELQNNNFSNILGSIDLPLNVTVWLHGNPACSNISLVDFCGTESEVIIDIPTNNTLGCSAVCPPSYECYSAKCPSSCVCSAPLLIGYRLKSPGFSRFSPYQRMFEEYLTNGLKLNLEQLDIGSPEWQKGPRLKMNLKLFPLYVADSNSSHMFNDSEVVRIVSKFTNWKIQDSDIFGPYELLSLTISDVYKNVFLTPSSNPTMSKGALAGIILGAIFGGATLSAIVFIFIIRSRVKGRHISRKRHLSKTALKIEGIKEFGYRETALATNNFHDSTVVGQGGYGKVYKGILADSTAVAIKRAQEGSLQGEKEFLTEIQLLSRLHHRNLVALIGYCDEEGEQMLVYEFMSNGTLRDHLSVNSAEPLSFATRLKAALGAAKGILYLHTEADPPIFHRDIKSSNILLDSKYMAKVADFGLSRLAPLPDTDGDVPAHVSTVVKGTPVKGAHQSGKFFSIIDGRLGSYPAECVERFVTLALKCCQDDTDARPSMAEVVRTLETIWLMLPECDRKIAAPLIADVIKVTSPPSSSSNMNNYYISEVSGSDLLSVAGASLRFSAAAVAVVNLLLVPPQPPS 927
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50345697 50371270 + Hsped.10g13960.1 Hepe10g1396 581943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1396 927 PANTHER RECEPTOR-LIKE PROTEIN 55 54 796 - -
Hepe10g1396 927 Gene3D Ribonuclease Inhibitor 297 385 IPR032675 -
Hepe10g1396 927 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515(InterPro)
Hepe10g1396 927 Pfam Protein tyrosine and serine/threonine kinase 630 775 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1396 927 ProSitePatterns Protein kinases ATP-binding region signature. 632 654 IPR017441 GO:0005524(InterPro)
Hepe10g1396 927 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515(InterPro)
Hepe10g1396 927 SUPERFAMILY L domain-like 51 415 - -
Hepe10g1396 927 Gene3D Phosphorylase Kinase; domain 1 597 701 - -
Hepe10g1396 927 Gene3D Transferase(Phosphotransferase) domain 1 702 796 - -
Hepe10g1396 927 Gene3D Transferase(Phosphotransferase) domain 1 797 857 - -
Hepe10g1396 927 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Hepe10g1396 927 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 36 197 - -
Hepe10g1396 927 FunFam Leucine-rich repeat protein kinase family protein 590 701 - -
Hepe10g1396 927 SUPERFAMILY Protein kinase-like (PK-like) 612 880 IPR011009 -
Hepe10g1396 927 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
Hepe10g1396 927 SMART LRR_typ_2 322 346 IPR003591 -
Hepe10g1396 927 SMART LRR_typ_2 203 227 IPR003591 -
Hepe10g1396 927 SMART LRR_typ_2 131 155 IPR003591 -
Hepe10g1396 927 Pfam Leucine Rich Repeat 300 322 IPR001611 GO:0005515(InterPro)
Hepe10g1396 927 Pfam Leucine Rich Repeat 277 294 IPR001611 GO:0005515(InterPro)
Hepe10g1396 927 Pfam Leucine Rich Repeat 229 251 IPR001611 GO:0005515(InterPro)
Hepe10g1396 927 Pfam Leucine Rich Repeat 133 155 IPR001611 GO:0005515(InterPro)
Hepe10g1396 927 ProSiteProfiles Protein kinase domain profile. 626 927 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1396 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1396 927 SMART serkin_6 626 855 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1396 927 Gene3D Ribonuclease Inhibitor 191 296 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0667 Hepe-Chr4:60103329 Hepe10g1396 Hepe-Chr10:50345697 8.52e-182 dispersed
Hepe10g1396 Hepe-Chr10:50345697 Hepe02g0926 Hepe-Chr2:11156908 1.31e-53 dispersed
Hepe10g1396 Hepe-Chr10:50345697 Hepe10g1398 Hepe-Chr10:50397851 0.0 proximal
Hepe10g1396 Hepe-Chr10:50345697 Hepe04g0676 Hepe-Chr4:60241003 3.56e-50 wgd
Hepe10g1396 Hepe-Chr10:50345697 Hepe05g0002 Hepe-Chr5:83401 2.30e-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73185 PF07714 PK_Tyr_Ser-Thr 7.90E-33 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1396 - - - 0.0