Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1414 ATGCATCGACGACTGAGGTCCTTGATAAGTTTTGTCATACGCCTACGTATTTGGTGGGTCGCTGGGCAAGCGGGTCTAGGTGGGCTCGAGCCTGGAGATAACTGGCTGGTCTCTGATGATCAATCTTACAACTCTAGCAAAAACTCCAGAAGCAGCAGCTCAAAGAATTCTGCTCATCAAAATCATTACTACCTTCACCCACAACCAGAAGATCAAGAATGCTTCAACACCTCGTTCATGGAGGATAATGAAGATCATTTCTCTGCCTCCTCTTCTTCAAAGCAACATCAGCATCAGCATCGACATCGACACCGTCATCCCTATCAACCCCACCAGTTTCAATGTTCCACCACTGCTAGTACTACTTCCACCGGTACTACTACTCCAAGTGATCAATGGTTCTCCCCGGTCACCGGAGACTTGAACTTCGAATTCTCCGACGATTGGGCCACTACGTTGCTTCTCCAAACAGCCATCGCCGTTGTCGAGAACAACGCTTCTCGTATCCAACAACTCATGTGGATGCTCAACGAGCTTGGCTCCCCCTACGGCGACATTGATCAAAAGCTGGCTTTCTACTTCCTTCAGGCCATGTTCGGCCGCATCACCGAGTCTGGCGATCGGTGCTACCGGACGTTGGCAGCGGTGTCGGAGAAACGATCTTGTTTCGAGTCAACGAGAAGAATGGTGTTGAAGTTTGAAGAGGTGAGTCCATGGATGACGTTTGGTCATGTTGCTTCAAATGGTGCGATCATGGAGGCTTTTGAAGGAGAAAAGAAGTTGCATATAATTGATATAAGCAACTCATTTTGCACTCAATGGCCGACTTTCCTTGAAGCTCTCGCAACGCGGTCAAACGAAACTCCGCACCTCAGGCTCACGGCGCTAATTGCAGCCAAATCAGATGGGAGCATTCGAGCTCATAAGAAGGTGATGAAAGAAATAAGTACAAGAATGGAGAAATTCGCCAGACTTATGGGAGTTCCCTTCAAATTCAAAGCAATATTCCACTCCGGCGACGTTTCAGAGATCAATTTCACGGAATTAGGCGTCCAACACGACGAAGCCGTCGCCGTCAACTGCGTCGGCGGGTTGCGCTCCGTCGCACCGGTCAATAACCGCCGCGGTTTTCTGATATCCTTGTTCGGAGCTTTACAGCCGAAGATAATCACGGTGGTGGAGGAGGAGGCGGATCTCGACGGCGACAGCAGCGGCGGTGTTGACTTTGTCAAAGACGTTCAAGAGTGTTTACGGTGGTTTAGAATTTACTTTGATTCCTTGGACGGAAGTTTCCCGACGGCCAGCGACGAGCAATTGATGCTTGAACGCTCCGCCGGACGCGCCGTCGTCGACTTGCTTGGATGCGCGCCGGCCGAGTCGGTGGAGAGGCGCGAGACGGCGGCGCGTTGGGCGCGTCGTTTGCATGAAGGTGGTTTCAATCCGGTGTCGTTTAGCGAGGATGTAAACGACGACGTACGAGCGCTTTTGAGGAGGTATAAGGACGGGTGGACGGTTACGGAGGACGGCGCCGTCGCCGGAATTTTTTTGGCTTGGAAAGGGCAGCCGGTGGTTTGGGCCGCCGCATGGGCGCCTGGACCGCCGGACGGAGAGAAGAGTTGCCGGAGTTAG 1629 52.24 MHRRLRSLISFVIRLRIWWVAGQAGLGGLEPGDNWLVSDDQSYNSSKNSRSSSSKNSAHQNHYYLHPQPEDQECFNTSFMEDNEDHFSASSSSKQHQHQHRHRHRHPYQPHQFQCSTTASTTSTGTTTPSDQWFSPVTGDLNFEFSDDWATTLLLQTAIAVVENNASRIQQLMWMLNELGSPYGDIDQKLAFYFLQAMFGRITESGDRCYRTLAAVSEKRSCFESTRRMVLKFEEVSPWMTFGHVASNGAIMEAFEGEKKLHIIDISNSFCTQWPTFLEALATRSNETPHLRLTALIAAKSDGSIRAHKKVMKEISTRMEKFARLMGVPFKFKAIFHSGDVSEINFTELGVQHDEAVAVNCVGGLRSVAPVNNRRGFLISLFGALQPKIITVVEEEADLDGDSSGGVDFVKDVQECLRWFRIYFDSLDGSFPTASDEQLMLERSAGRAVVDLLGCAPAESVERRETAARWARRLHEGGFNPVSFSEDVNDDVRALLRRYKDGWTVTEDGAVAGIFLAWKGQPVVWAAAWAPGPPDGEKSCRS 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 50776035 50780640 - Hsped.10g14140.1 Hepe10g1414 581961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1414 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 100 529 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
Hepe10g1414 542 MobiDBLite consensus disorder prediction 95 109 - -
Hepe10g1414 542 MobiDBLite consensus disorder prediction 110 131 - -
Hepe10g1414 542 Pfam GRAS domain family 152 529 IPR005202 -
Hepe10g1414 542 ProSiteProfiles GRAS family profile. 141 530 IPR005202 -
Hepe10g1414 542 MobiDBLite consensus disorder prediction 84 131 - -
Hepe10g1414 542 MobiDBLite consensus disorder prediction 40 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1431 Hepe-Chr3:71072483 Hepe10g1414 Hepe-Chr10:50776035 4.25e-33 dispersed
Hepe09g1143 Hepe-Chr9:13336648 Hepe10g1414 Hepe-Chr10:50776035 8.27e-27 dispersed
Hepe10g1414 Hepe-Chr10:50776035 Hepe04g1315 Hepe-Chr4:68769049 2.95e-194 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56523 PF03514 GRAS 5.50E-97 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1414 K27743 - csv:101210294 655.21