Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1430 | ATGTGGGATCTCAATGATTCTCCCGATCATGGCGGAACGGATGAATTTGAGGGGTTTTCCTCGATTGACGGCGATGACGACAGAGCCAAATGGGTAGGATCCATTCATTCCAACTCCAGCTCTTCGGCGGTGGTTATGGAGGATGGATCCGACGCCGACGAGGCCAGCGCCGGCGAGGGCGAACCATTACTCCACCGGAATAACTTCTCGGTGAACCCCCCGCCGGCGACTCGGCAGTTCTTCCCCATGGAAGATTCCGACATGGGGGCTTCATCGGTCGGCGGCGGTGGTGGTGGTGGTGGTGGTTCTACTGCGTTCCCTCGAGCTCGGTGGGTCGGCGTGAAGTTCTGCCAGACGGAGCCTGTCGCCGCCGTGAGACCGGTGGCGATTCTGCAGCCAATAAAGAAAAGCCGGCGAGGACCGAGGTCTCGGAGCTCTCAATATCGCGGCGTCACGTTCTACCGGCGAACCGGCCGGTGGGAATCTCACATTTGGGACTGTGGCAAACAAGTTTATCTGGGCGGATTTGACACTGCTCATTCAGCTGCTCGAGCCTATGACAGGGCGGCTATAAAGTTTAGAGGAACAGAAGCAGACATAAATTTCAGTATTGAAGACTACGAGGAGGATTTGAAGCAGATGGGGAATTTGACCAAGGAAGAATTTGTACATGTTCTTCGTAGACAAAGCACGGGTTATCCGAGAGGAAGCTCAAAATTTCGAGGTGTAACATTGCATAAATGTGGAAGATGGGAGAGCCGAATGGGGCAGTTTTTAGGCAAAAAGTACGTTTATTTGGGGTTGTTCGATTCCGAGGTTGAAGCTGCGAGAGCTTATGACAAAGCTGCAATCAAGTGTAATGGAAAAGAAGCTGTTACAAACTTTGATCCCAGCATATATGAGAATGAGCTTAGTACAACAGAATCATCATCATCAGGCAATGTCTTGGAACAGAATCTTGATTTGAGGTTAGGTAATTCAAGCTCAAAACTAAACACCCTTACAGTTGGGAATCATTGCTCAAATGTCACCAAAAATATTGATTTGCAAAATAGGGAATCTAATCCTCAGGAATCAAATATATATGAGAATGATACTGGTAGAAGATACACGTTCCTTCAGACAGAGAAAAGGCAGTTGCCTAGAGAAACGATGGTTCGATCTCCACCCTCCATTGAAACAACGATACATGGGCGCTTGGAGAGATCTGTTGAATTGCAGACTCTTCACAATTACTCTCCACACATCAATCAATCAAACTCTCAAGTAAGATTTTGGTACTTTTGA | 1287 | 48.1 | MWDLNDSPDHGGTDEFEGFSSIDGDDDRAKWVGSIHSNSSSSAVVMEDGSDADEASAGEGEPLLHRNNFSVNPPPATRQFFPMEDSDMGASSVGGGGGGGGGSTAFPRARWVGVKFCQTEPVAAVRPVAILQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRGTEADINFSIEDYEEDLKQMGNLTKEEFVHVLRRQSTGYPRGSSKFRGVTLHKCGRWESRMGQFLGKKYVYLGLFDSEVEAARAYDKAAIKCNGKEAVTNFDPSIYENELSTTESSSSGNVLEQNLDLRLGNSSSKLNTLTVGNHCSNVTKNIDLQNRESNPQESNIYENDTGRRYTFLQTEKRQLPRETMVRSPPSIETTIHGRLERSVELQTLHNYSPHINQSNSQVRFWYF | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 50968401 | 50971896 | + | Hsped.10g14300.1 | Hepe10g1430 | 581977 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1430 | 428 | FunFam | AP2-like ethylene-responsive transcription factor | 238 | 298 | - | - | |
Hepe10g1430 | 428 | ProSiteProfiles | AP2/ERF domain profile. | 239 | 296 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | FunFam | AP2-like ethylene-responsive transcription factor | 146 | 205 | - | - | |
Hepe10g1430 | 428 | CDD | AP2 | 238 | 298 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | SMART | rav1_2 | 147 | 209 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | SMART | rav1_2 | 239 | 302 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | ProSiteProfiles | AP2/ERF domain profile. | 147 | 203 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | Gene3D | AP2/ERF domain | 146 | 205 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | Gene3D | AP2/ERF domain | 238 | 297 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 40 | 349 | - | - | |
Hepe10g1430 | 428 | CDD | AP2 | 147 | 202 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | PRINTS | Ethylene responsive element binding protein signature | 278 | 298 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | PRINTS | Ethylene responsive element binding protein signature | 240 | 251 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Hepe10g1430 | 428 | SUPERFAMILY | DNA-binding domain | 238 | 298 | IPR016177 | GO:0003677(InterPro) | |
Hepe10g1430 | 428 | Pfam | AP2 domain | 147 | 195 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | Pfam | AP2 domain | 238 | 288 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe10g1430 | 428 | SUPERFAMILY | DNA-binding domain | 146 | 204 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe05g0230 | Hepe-Chr5:2708197 | Hepe10g1430 | Hepe-Chr10:50968401 | 2.28e-104 | dispersed | |
Hepe08g0848 | Hepe-Chr8:7688552 | Hepe10g1430 | Hepe-Chr10:50968401 | 1.25e-110 | dispersed | |
Hepe09g0546 | Hepe-Chr9:5155113 | Hepe10g1430 | Hepe-Chr10:50968401 | 3.98e-42 | dispersed | |
Hepe10g1430 | Hepe-Chr10:50968401 | Hepe02g0583 | Hepe-Chr2:5908045 | 8.29e-10 | dispersed | |
Hepe04g1257 | Hepe-Chr4:68074587 | Hepe10g1430 | Hepe-Chr10:50968401 | 3.26e-142 | transposed | |
Hepe10g1430 | Hepe-Chr10:50968401 | Hepe04g1342 | Hepe-Chr4:69024398 | 9.25e-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56526 | PF00847 | AP2 | 2.50E-08 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1430 | K09284 | - | csv:101208665 | 687.567 |