Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1434 ATGGCCTGCCCAGCCAAAGTCCGATCTGTTCAAAAAGCCCTAACCATGGTCGACGGCGTAAAACGAGCATTCGTCTGTATCGAAATCGAAGAAGCCAAAGTCCTCTTCGATCCAAATCTGACCACCGAGGCCCTAATCCTCACCGCAATCGACGATTGCGGCTTCGAAGTCGAGCTGATCTCCGCCGCCGGCGAAGCCTACAAAGTTCACATAAAGCTCGACCGAGTTGGCCCGGCGGACATGGCCGCCATAAGAACCTCTCTCGAGCAAGCTTCTGGAGTGAACTCTGTCAAAATGGACGGACAGATGGTTTCGATAGCCTACGACCCCGATCGGACTGGTCCGAGGTCTCTTTTGCATTGCCTCAAGAGCTACGAGGCAAGCTTGTATGTGCCTCCGAAGAGAAGAGATGTCGAGCAGCTTCAAGAAGCTTGTGCTTATAGGAACTTGTTCTTGCTCAGCTGCTTGTTTTCGGTTCCGGTGGTCGCCTTTGCAATGGTGCTTCCTATGCTTCCTCCTTATGGGGAGTGGCTGAATTATCGGGTTTGCAATATGCTTACTGTTGGAATGGTTCTTAAATGGATCTTCTGCACACCAGTGCAGTTTCTTGCTGGCCGGAGATTTTATGTAGGATCGTACCGTGCATTACAACGGAAGTCTGCAAATATGGATGTTTTGGTTGCGGTAGGCACCAATGCAGCTTACTTTTACTCGGTATACATAGTATTTAAAGCATCAACTTCCAACTCTTTTAGAGGGAAAGATTTCTTTGAGACTAGCTCCATGTTGATCTCCTTCATTATTCTTGGAAAATATTTGGAGGTCATGGCGAAAGGGAAATCATCAGATGCTTTAGCAAAACTTGCTCATCTTGCTCCTGATACAGCTTGTTTGATGAGCTTCGATGATAATGGAAAATTGCTATCAGAGATGGAGATTGATACTCAGCTGATACAACGGAATGATATAATTAGGATTGTTCCTGGGGCAAAAGTTCCTGTTGATGGGATTGTTATAAGTGGTGAAAGCAATGTAAATGAGAGTACAATTACTGGAGAAGCAAGACTCATTGCGAAAGCACCAGGTGACAAGGTTATTGGCGGGACTGTCAATGAAAATGGATGCTTATTTGTTAAGACCACTCATGTTGGATCTGATACTACACTTTCTCGAATTGTACAACTCGTAGAATCAGCTCAGCTATCTCGAGCACCAGCTCAAAAATTAGCAGATCGGATATCAAAGTTTTTTGTTCCTGTTGTTGTTGTGGCAGCATTTGTGACATGGCTTGGATGGTTAGTCTGTGGAGAAGCTGGGTTATACCCTAAACATTGGATACCAAAAGGCATGGATGAGTTTGAACTTGCACTGCAGTTTGGCATTTCAGTGCTGGTGATCGCATGCCCATGTGCCCTTGGTTTAGCAACGCCAACTGCGATTATGGTTGCGTCGGGGAAGGCTGCTTCTCTAGGTGTGCTCATTAAGGGAGCAAGTGCACTTCAAAATGCATACAAGGTGAAAATGATAGTTTTTGACAAGACTGGAACTCTAACAGTTGGCAGGCCAGAGGTAGTTAGTGTTGTGCTTTTTTCCTCATTTGACATGCAGGAGCTCTGTGATGTAGCGATAGCGATCGAGTCAAACAGTGAACACCCTTTAGCAAAATCTGTAGTGGAGCACGCAAAGAAAATGAGAAAGAAGTTTGGGGCCCGAACCGACTGTCGCACACGCATCCAGAACTTCGAGGTCTTCCCGGGAGGAGGAGTTGGAGGAAGAATTGATAGAAAGCCAGTTTTAGTAGGAAACAGAAGGCTGTTGCGAGCTCACAACATTTTTGTTGGTCCTCAAGTTGATCGTTATGTTATAGAAAATGAGCGGCTGGCTCAAACATGTATCTTGGTGGCTATTAACGGCAGGGTAGCAGGAGGTTTTGGTGTTATAGATGCGCCAAAGCCCGGGACTAAAGCTGTTATATCGTTTCTTCGCTCAATCGGCATCTCGAGCATAATGGTCACTGGCGATAACTGGGCCACAGCATTTGCTGTTGCAAGAGGGGTTGGGATTAATGAGGTCTTTGCGGAGATGGATCCAGTTGGAAAAGCTAACAAGATTAAATCCTTAAAGACGACAGGGAATATTGTGGCAATGGTGGGAGATGGAGTAAATGACTCAAATGTGTTAGCTGCAGCTGATGTTGGCATTGCAATTGGAGCTGGAACAAATATTGCTATAGAAGCAGCTGATATAGTTCTCATGAGAAGCAATTTAGAAGATGTAGTTACAGCCATAGATCTCTCAAGACAAACTGTTTATCGTATATGGCTTAACTACATCTGGGCTCTTGGCTATAATATCATTGGTATGCCTATTGCTGCCGGAATCTTATATCCCTTCACCGGGTTCCGATTGCCACCGTGGCTCGCCGGTGCCTGCATGGCTGCTTCCTCCCTTAGCGTCGTATGTTCTTCTCTCTTATTGAAATGCTATAGGAGACCCTTGAATTTTCAATCCACTTGA 2517 45.57 MACPAKVRSVQKALTMVDGVKRAFVCIEIEEAKVLFDPNLTTEALILTAIDDCGFEVELISAAGEAYKVHIKLDRVGPADMAAIRTSLEQASGVNSVKMDGQMVSIAYDPDRTGPRSLLHCLKSYEASLYVPPKRRDVEQLQEACAYRNLFLLSCLFSVPVVAFAMVLPMLPPYGEWLNYRVCNMLTVGMVLKWIFCTPVQFLAGRRFYVGSYRALQRKSANMDVLVAVGTNAAYFYSVYIVFKASTSNSFRGKDFFETSSMLISFIILGKYLEVMAKGKSSDALAKLAHLAPDTACLMSFDDNGKLLSEMEIDTQLIQRNDIIRIVPGAKVPVDGIVISGESNVNESTITGEARLIAKAPGDKVIGGTVNENGCLFVKTTHVGSDTTLSRIVQLVESAQLSRAPAQKLADRISKFFVPVVVVAAFVTWLGWLVCGEAGLYPKHWIPKGMDEFELALQFGISVLVIACPCALGLATPTAIMVASGKAASLGVLIKGASALQNAYKVKMIVFDKTGTLTVGRPEVVSVVLFSSFDMQELCDVAIAIESNSEHPLAKSVVEHAKKMRKKFGARTDCRTRIQNFEVFPGGGVGGRIDRKPVLVGNRRLLRAHNIFVGPQVDRYVIENERLAQTCILVAINGRVAGGFGVIDAPKPGTKAVISFLRSIGISSIMVTGDNWATAFAVARGVGINEVFAEMDPVGKANKIKSLKTTGNIVAMVGDGVNDSNVLAAADVGIAIGAGTNIAIEAADIVLMRSNLEDVVTAIDLSRQTVYRIWLNYIWALGYNIIGMPIAAGILYPFTGFRLPPWLAGACMAASSLSVVCSSLLLKCYRRPLNFQST 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51031666 51036672 - Hsped.10g14340.1 Hepe10g1434 581981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1434 838 NCBIfam HAD-IC family P-type ATPase 263 547 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe10g1434 838 NCBIfam HAD-IC family P-type ATPase 625 794 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe10g1434 838 PRINTS P-type cation-transporting ATPase superfamily signature 346 360 - -
Hepe10g1434 838 PRINTS P-type cation-transporting ATPase superfamily signature 740 752 - -
Hepe10g1434 838 PRINTS P-type cation-transporting ATPase superfamily signature 510 524 - -
Hepe10g1434 838 PRINTS P-type cation-transporting ATPase superfamily signature 664 674 - -
Hepe10g1434 838 PRINTS P-type cation-transporting ATPase superfamily signature 717 736 - -
Hepe10g1434 838 PRINTS P-type cation-transporting ATPase superfamily signature 642 653 - -
Hepe10g1434 838 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 834 - -
Hepe10g1434 838 SUPERFAMILY HAD-like 508 823 IPR036412 -
Hepe10g1434 838 SUPERFAMILY Calcium ATPase, transduction domain A 310 396 IPR008250 -
Hepe10g1434 838 Gene3D - 1 63 - -
Hepe10g1434 838 ProSiteProfiles Heavy-metal-associated domain profile. 1 58 IPR006121 GO:0046872(InterPro)
Hepe10g1434 838 CDD HMA 1 58 IPR006121 GO:0046872(InterPro)
Hepe10g1434 838 NCBIfam heavy metal translocating P-type ATPase 223 826 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Hepe10g1434 838 PRINTS Copper-transporting ATPase signature 694 711 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase signature 260 279 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase signature 280 298 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase signature 208 227 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase signature 419 433 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase signature 790 804 - -
Hepe10g1434 838 SFLD Haloacid Dehalogenase 492 769 - -
Hepe10g1434 838 Pfam haloacid dehalogenase-like hydrolase 506 731 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase 1 signature 48 68 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase 1 signature 151 172 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase 1 signature 186 206 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase 1 signature 19 42 - -
Hepe10g1434 838 PRINTS Copper-transporting ATPase 1 signature 206 231 - -
Hepe10g1434 838 Gene3D - 477 773 IPR023214 -
Hepe10g1434 838 ProSitePatterns E1-E2 ATPases phosphorylation site. 512 518 IPR018303 -
Hepe10g1434 838 Gene3D - 517 595 IPR023299 GO:0000166(InterPro)
Hepe10g1434 838 Gene3D - 596 648 IPR023299 GO:0000166(InterPro)
Hepe10g1434 838 FunFam Copper-transporting ATPase 1, putative 278 400 - -
Hepe10g1434 838 Pfam E1-E2 ATPase 309 488 - -
Hepe10g1434 838 SFLD p-type atpase 492 769 IPR044492 -
Hepe10g1434 838 SUPERFAMILY HMA, heavy metal-associated domain 1 61 IPR036163 GO:0046872(InterPro)
Hepe10g1434 838 Gene3D - 278 400 - -
Hepe10g1434 838 SUPERFAMILY Calcium ATPase, transmembrane domain M 258 504 IPR023298 -
Hepe10g1434 838 CDD P-type_ATPase_Cu-like 151 813 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1554 Hepe-Chr6:66245480 Hepe10g1434 Hepe-Chr10:51031666 3.04e-294 dispersed
Hepe09g0464 Hepe-Chr9:4231993 Hepe10g1434 Hepe-Chr10:51031666 1.14e-69 dispersed
Hepe10g1434 Hepe-Chr10:51031666 Hepe02g2444 Hepe-Chr2:70563807 4.03e-12 dispersed
Hepe10g1434 Hepe-Chr10:51031666 Hepe07g0336 Hepe-Chr7:3365476 7.92e-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1434 K17686 - csv:101214276 1390.17