Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1467 ATGGATATTTGGGTTCGGAAGGTAATGGTGATGATGCTGCTGATGATGATCCTAGGAGCTGCGAGCCAGAGCCGCAGAAACCAGGGTCAGGGAGGGGATCCGGAGCCGGTGCCGGAGCCGGAGCCGGAGTCGGAGGATTTACTTTCTTATCTGGAAAGTGCAGGTTCTTCCCCCACTCCTCTGGCCCTTATGGTTCCCCTAACTCTCATACAGGGCGCTGCTTCTAAAGGAGCTGTCTGTTTAGATGGCACACTACCTGGTTACCATTTTCATCCTGGCTTTGGATCCGGTGCAAACAGTTGGCTTATACATTTAGAGGGAGGTGGTTGGTGTAATACCATCAGGAGTTGTGTTTTTCGCAAAACCACTCGCCGTGGTTCATCCAAATATATGGAAAAACAATTACCCTTCACAGGAATATTGAGCAACAATCCCCAGGAAAACCCTGATTTCTTCAATTGGAACAGAGTCAAGCTACGCTATTGTGATGGTGCATCGTTTACCGGAGACAGTCGGAATGAGGCAGCACAGCTTAATTTTCGAGGACAGCGGATATGGTTGACTGCAATGGAAGAGTTAATGTCAAAAGGAATGCAAAATGCCAACCAGGCGTTGCTTTCTGGATGCTCTGCTGGGGGTCTGGCATCCATACTGCATTGTGATGAATTCCATGAATTATTTCCTAAAACTACTACAGTAAAATGCTTAAGCGATGCAGGGTTCTTTCTTGACTCAATTGATGTATCTGGTGGGCGCACCTTGAGGAATATGTTTGGAGGTGTAGTTACGTTACAGGAACTGCAGAAAAATCTTCCAAGAACTTGCATAAACCACTTGGATCCAACAATGTGTTTCTTTCCTCAGAATGTGATAACTGATGTCAAGACCCCACTGTTTCTTCTCAATGCAGCATACGATTCATGGCAGGTTCAAGATAGTTTAGCTCCACCATCTGCGGATCCTCGTGGATCTTGGAAGGAATGCAAATTGAACCATGCACATTGTAATTCATCTCAGATACAATTCCTTCAAGATTTTAGGAATGAAATGGTGAATGCAGTAAAAGATTTCTCAATGTCCAATCAAAATGGTTTGTTCATAAACTCTTGTTTTGCTCATTGCCAGTCTGAGAGGCAAGATACATGGTTTGCAGATGATTCTCCTGTTATTGGAAGCAAGGCGATTGCAGTGTCTGTTGGAGATTGGTACTTTGATAGAGGAGCAAGTGTCAAAGCTGATTGTGCATACCCATGTGATGAAACCTGCCATAATCTGGTCTTCAACTGA 1287 44.76 MDIWVRKVMVMMLLMMILGAASQSRRNQGQGGDPEPVPEPEPESEDLLSYLESAGSSPTPLALMVPLTLIQGAASKGAVCLDGTLPGYHFHPGFGSGANSWLIHLEGGGWCNTIRSCVFRKTTRRGSSKYMEKQLPFTGILSNNPQENPDFFNWNRVKLRYCDGASFTGDSRNEAAQLNFRGQRIWLTAMEELMSKGMQNANQALLSGCSAGGLASILHCDEFHELFPKTTTVKCLSDAGFFLDSIDVSGGRTLRNMFGGVVTLQELQKNLPRTCINHLDPTMCFFPQNVITDVKTPLFLLNAAYDSWQVQDSLAPPSADPRGSWKECKLNHAHCNSSQIQFLQDFRNEMVNAVKDFSMSNQNGLFINSCFAHCQSERQDTWFADDSPVIGSKAIAVSVGDWYFDRGASVKADCAYPCDETCHNLVFN 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51550209 51554407 + Hsped.10g14670.1 Hepe10g1467 582014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1467 428 MobiDBLite consensus disorder prediction 24 46 - -
Hepe10g1467 428 PANTHER NOTUM-RELATED 22 425 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Hepe10g1467 428 Pfam Pectinacetylesterase 63 407 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe06g1413 Hepe-Chr6:64502077 Hepe10g1467 Hepe-Chr10:51550209 4.38e-12 dispersed
Hepe07g0151 Hepe-Chr7:1382836 Hepe10g1467 Hepe-Chr10:51550209 5.37e-150 dispersed
Hepe07g0857 Hepe-Chr7:10797675 Hepe10g1467 Hepe-Chr10:51550209 1.40e-152 dispersed
Hepe09g1772 Hepe-Chr9:55498252 Hepe10g1467 Hepe-Chr10:51550209 5.53e-217 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1467 K19882 - cit:102609454 648.662