Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1506 ATGGCTACTTGCATTCGAGATTCGGTAGAAGACGAGGAACACATTTTCCGCAGCCAACTTCCTGAGGTCCAAGTGCCTGATGATATTACATTGCCGGAGTTTGTACTTCAGAATGCTGAATCATATGCTGAAAATGTGGCATTTGTGGAAGCCGTGAGCGGAAAGGCGTATACTTACCGCGAAGTTGTGAGAGATACGAATAGATTCGCTAAGGCCTTGAGTTCTCTGAGGTTGAGGAAGGGGCAGGTGGTTATTGTTGTTCTACCTAACGTTGCAGAATATGCCATTGTTGCTTTAGGCATAATGGCTGCTGGAGGTGTGTTTTCTGGTGTGAATCCAGCAGCTCACATATCAGAAATTCAAAAGCAGGTGGAGACAGCAGAAGCCAAACTCGTCGTCACAAACAGTGCAAACTTTGAAAAGGTGAAGGAATTAAAGCTACCAGTGATCGTATTGGGGGAGGAACTGATTGAAGGTTCCATGAACTGGCACAAACTGCTTGAAGCTGCGGACCGTGCAGGCAACAATTTTGTCAAAGAAGATATCAAGCAGACTGATTTATGTGCACTTCCTTTCTCATCAGGAACCACAGGGGTTTCCAAAGGCGTTATGCTAACTCACAGAAATATAGTGGCTAACTTGTGTTCTACTCTCTCCGGTGTGCCGCAAGAAATGGTCGGCAAGGTCACGACGTTAGGCCTCATTCCGTTCTTCCACATTTACGGGATTACTGGAATATGTTGTGCCACACTTAGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTCAGGACTTTCATTAATGCCCTCATAACACAGGAGGTCACATTTGCTCCAATTGTTCCTCCTATCATCCTGGCTTTGGTTAAGAATCCTATTGTGGAGGAATTTGATCTTAGCGGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCGCTCGCACCGGAACTTCAAACTGCCTTTGAGAAAAAGTTCCCGGGCGTGGATGTTCAAGAGGCATATGGACTAACCGAGCACAGCTGCATCACTCTCAACTATGGAAGTATAGGAAAAGAGAATCTCGCTACAAAGAAAAACACAGTTGGCTGCATTCTTCCTAACCTAGAAGTCAAATTCATTGACCCCGACAGCGGCAGGTCTCTGCCAAAGAATACTCCGGGTGAAGTCTGTGTAAGAAGCCAGTGTGTGATGCAAGGCTACTACAAAAATGAAGAGGAGACTTCAAGGACCATTGACAACAAAGGCTGGATGCACACTGGCGACATCGGATACATTGATGACGATGGCGATGTGTTTATTGTGGATCGTATTAAAGAATTGATCAAGTACAAAGGCTTTCAAGTTGCCCCAGCTGAGTTAGAGGCAATCCTCCTGACTCATCCCTCCATTGAAGATGCAGCTGTGGTGCCGCTGCCAGACGAAGAAGCCGGTGAGATCCCAGCAGCAAGCGTCGTGATAGCTCTGAATTCAAATGAAACTGAAGATGAAATAATGAAATACGTTGCCTCAAACGTTGCACATTACAAGAAAGTTAGGCTGGTTCATTTTGTGGACACTATCCCAAAATCGCCTTCTGGGAAAGTTATGAGAAGGTTGATCAAAGAGAAGATGATCGAAAAGATTCGAGCCGAGGCCGCCTCTTGA 1653 45.67 MATCIRDSVEDEEHIFRSQLPEVQVPDDITLPEFVLQNAESYAENVAFVEAVSGKAYTYREVVRDTNRFAKALSSLRLRKGQVVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIQKQVETAEAKLVVTNSANFEKVKELKLPVIVLGEELIEGSMNWHKLLEAADRAGNNFVKEDIKQTDLCALPFSSGTTGVSKGVMLTHRNIVANLCSTLSGVPQEMVGKVTTLGLIPFFHIYGITGICCATLRNKGKVVVMGRFDLRTFINALITQEVTFAPIVPPIILALVKNPIVEEFDLSGLKLQAIMTAAAPLAPELQTAFEKKFPGVDVQEAYGLTEHSCITLNYGSIGKENLATKKNTVGCILPNLEVKFIDPDSGRSLPKNTPGEVCVRSQCVMQGYYKNEEETSRTIDNKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDEEAGEIPAASVVIALNSNETEDEIMKYVASNVAHYKKVRLVHFVDTIPKSPSGKVMRRLIKEKMIEKIRAEAAS 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51833254 51835512 + Hsped.10g15060.1 Hepe10g1506 582053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1506 550 SUPERFAMILY Acetyl-CoA synthetase-like 14 543 - -
Hepe10g1506 550 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Hepe10g1506 550 Gene3D - 13 441 IPR042099 -
Hepe10g1506 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 536 - GO:0004467(PANTHER)|GO:0016405(PANTHER)|GO:0046949(PANTHER)
Hepe10g1506 550 Gene3D - 442 544 IPR045851 -
Hepe10g1506 550 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Hepe10g1506 550 CDD 4CL 25 534 - -
Hepe10g1506 550 Pfam AMP-binding enzyme 37 404 IPR000873 -
Hepe10g1506 550 FunFam Long-chain-fatty-acid--CoA ligase FadD 17 441 - -
Hepe10g1506 550 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2161 Hepe-Chr8:60864587 Hepe10g1506 Hepe-Chr10:51833254 1.65e-129 dispersed
Hepe09g0491 Hepe-Chr9:4565972 Hepe10g1506 Hepe-Chr10:51833254 1.76e-129 dispersed
Hepe10g1034 Hepe-Chr10:41075684 Hepe10g1506 Hepe-Chr10:51833254 8.71e-90 dispersed
Hepe10g1506 Hepe-Chr10:51833254 Hepe03g1690 Hepe-Chr3:73737309 5.27e-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1506 K01904 - csv:101220731 983.015