Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1514 ATGGCTTCGGCTTGTGCTTCTTCCGCCATTGCGGCTGTTGCAATCTCTTCATCCAGTTCTCAGAAGAATGGGTGTCCCAAGGCTTCTAATTTCGTTACAGGGAAGAAGCTGAGGCTGAAGAATTACACCGCCGCTGCCGTCGCTCCTCGATCTGCTCCGATGTGTGCCGCCGCCGATCCTAACAGACCCCTCTGGTTCCCCGGCAGCATCCCTCCTCCATGGCTCGACGGCAGCCTCCCCGGTGACTTCGGCTTCGACCCTCTTGGTCTTTCTTCTGATCCGGAGAGCCTGAGATGGAACCAGCAGGCGGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGCGCCGCCGGAATTTTCATCCCGGAGTTTTTGACAAAGATCGGAATTTTGAACACCCCTTCATGGTACACCGCCGGAGAACAGGAATACTTCACCGACACCACCACCCTCTTCATCGTTGAACTAATTTTCATCGGTTGGGCCGAGGGTAGACGGTGGGCCGACATCCTCAAACCTGGCTCCGTCAACACCGACCCGATCTTCCCCAACAACAAACTGACCGGAACCGACGTTGGGTACCCAGGCGGGCTGTGGTTCGACCCGCTCGGGTGGGGCAGCGGGTCACCCGAAAAGCTCAAGGAATTGAGGACGAAAGAGATCAAGAACGGACGATTGGCGATGTTGGCGGTCATGGGAGCGTGGTTCCAACACATTTACACTGGAGCCGGTCCCATTGACAACCTTTTCGCCCACCTTGCCGATCCCGGCCACGCCACTGTTTTCGCCGCTTTCACACCAAAGTGA 804 57.34 MASACASSAIAAVAISSSSSQKNGCPKASNFVTGKKLRLKNYTAAAVAPRSAPMCAAADPNRPLWFPGSIPPPWLDGSLPGDFGFDPLGLSSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGAGPIDNLFAHLADPGHATVFAAFTPK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 51884660 51887331 - Hsped.10g15140.1 Hepe10g1514 582061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1514 267 Pfam Chlorophyll A-B binding protein 71 237 IPR022796 -
Hepe10g1514 267 Gene3D Chlorophyll a/b binding protein domain 72 257 - -
Hepe10g1514 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 262 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Hepe10g1514 267 FunFam Chlorophyll a-b binding protein, chloroplastic 72 257 - -
Hepe10g1514 267 SUPERFAMILY Chlorophyll a-b binding protein 57 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2501 Hepe-Chr7:69346219 Hepe10g1514 Hepe-Chr10:51884660 1.79e-72 dispersed
Hepe09g0945 Hepe-Chr9:9504103 Hepe10g1514 Hepe-Chr10:51884660 2.26e-108 dispersed
Hepe09g1201 Hepe-Chr9:14807166 Hepe10g1514 Hepe-Chr10:51884660 3.22e-48 dispersed
Hepe10g1514 Hepe-Chr10:51884660 Hepe09g0112 Hepe-Chr9:895168 9.21e-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1514 K08908 - csv:101214055 505.368