Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1528 ATGGAGACGAATCTGTTGTTTCTCATCCTCAATTTCTTCTTGATTTTTCACTTTCAGGTTCAATTTAGGGTTTTCGCCCTCTCGCCGGACGGTCTCTCTCTTCTTTCTCTCAAGTCGGCGGTCGATCAGTCGCCCGATTCCTCTGTTTTCTCCGATTGGAATGAGGATGACTCCACGCCTTGCCGTTGGTCTGGCATTTCTTGCATGAATGTTTCCGGTGATTCGCGTGTCGTGGGGATTGCTCTCTCCGGTAAGAATCTCCATGGCTACATTCCTTCTGAGCTCGGTTCGCTTGTCTTTCTCCGGCGATTGAACCTCCATAACAACAATTTATACGGCTCGATACCTGAGCAATTGTTTAATGCTACCTCATTGCATAGCATATTTCTCTATAGTAATAATCTCTCCGGTCCTTTCCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCCAACAATTCCCTCGCCGGACCAATCCCCGATGAATTGAAGAATTGTAAGCAATTGCAGCGTTTAATTCTCGCCAGAAATCAATTCGACGGAGAAATTCCGTCTGGTGTGTGGCCCGGGATGGATAATTTACTTCAACTCGATCTCTCATCCAACGATTTCAGCGGATCGATTCCGGAGGATTTGGGAGACCTCAAGACACTTTCCGGTACGCTCAACTTGTCCTTCAATCATCTATCGGGAAAAATCCCGAAGACGCTCGGAGATTTGCCGGTGACGGTGAGTTTCGACCTCCGGAGCAACAATTTGAGTGGAAGTATACCGCAGACGGGTTCTTTCGCGAATCAAGGACCAACGGCATTTCTCAATAATCCAAAGCTGTGTGGATTTCCTCTTCAGAAATCTTGTGAGAGTTCAGAACGTGGCTCACCGGAAAATCCCGATTCGAGGCCGTCATACATTGCCCCTAGAAAAGGCTTAAGCGCCGGGTTAATCATTCTAATCTCCGCCGCCGACGCCGCCGGAGTGGCGTTTATCGGCCTGGTAATAGTATACATTTACTGGCGAAGAAAAGACAATTCTAACGGGTGTAGCTGTACGGCGAAAGGAAAATTCGGTGGGAATCAGAAAGGGCATCTCTGCAATTTTCCTTGTATGAATGGAAATGATAAGAACGAGGAGTCGGAAATGGAGGAGCCGCCGGAGAACAGTGACGGAAGCAGAGAGGAAGGAGGGCTTGTGGCCATAGACAAAGGATTTACGTTCGAGCTCGACGAGCTGCTGAGAGCATCGGCGTATGTTCTGGGAAAGAGTGGACTGGGGATTGTGTACAAAGTGGTGCTCGGAAATGGGATTCCGGTGGCCGTACGGCGGCTGGGCGAAGGCGGAGAACAGAGGTATAAGGAGTTCGCGGCGGAGGTGCAGGCGATTGGAAGGGTAAAACATCCCAATATTGTGAAATTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTTTGATCAGTGATTTCATCTCTAATGGGAATTTGGCCTCTGCACTTCGCGGGAGAAACGGTCAACCATCTTCAATCCTTTCATGGTCAACTAGACTGCGAATTGCCAAAGGAACCGCAAGGGGGTTAGCCTATCTACACGAATGCAGTCCAAGAAAATTCGTCCACGCCGACATCAAGCCTTCCAACATTCTCCTCGACAACGAATTTCAGCCCCACATCTCTGACTTCGGCCTCAACCGTTTGATCAGCATCACCGGCAACAACCCCTCCTCCTCCGGCGGTCTCATCGGCGGCGCTTTCTCCTACCTCAAATCCGTCCAAACCGACCGCATCAACAACTACTGCGCCCCGGAGGCCCGAGCCCCCGCCGCCCGCCCCACCCAGAAATGGGACGTATATTCCTTCGGCGTCATCGTCCTCGAATTGCTCACCGGAAAGTCGCCGGAGCTTTCTCCCAACACGTCGACTTCTTTGGAGATTCCAGATTTGGTGAGGTGGGTCAGGAAAGGGTTTGAAGAAGCAAAGCCGTTGTCGGATTTGGTCGACCCTGCTCTGTTGCAAGAAGTACATGCCAAGAAAGAAGTGCTCGCCGTGTTCCACGTGGCGCTTGCCTGTACGGAGAGCGACCCGGAAGTCCGGCCAAGAATGAAAACGGCGTCGGAGAGTTTCGACAGGATTGGATGA 2142 50.89 METNLLFLILNFFLIFHFQVQFRVFALSPDGLSLLSLKSAVDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVFLRRLNLHNNNLYGSIPEQLFNATSLHSIFLYSNNLSGPFPPSICNIPRLQNLDLSNNSLAGPIPDELKNCKQLQRLILARNQFDGEIPSGVWPGMDNLLQLDLSSNDFSGSIPEDLGDLKTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPKLCGFPLQKSCESSERGSPENPDSRPSYIAPRKGLSAGLIILISAADAAGVAFIGLVIVYIYWRRKDNSNGCSCTAKGKFGGNQKGHLCNFPCMNGNDKNEESEMEEPPENSDGSREEGGLVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGRNGQPSSILSWSTRLRIAKGTARGLAYLHECSPRKFVHADIKPSNILLDNEFQPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTDRINNYCAPEARAPAARPTQKWDVYSFGVIVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSDLVDPALLQEVHAKKEVLAVFHVALACTESDPEVRPRMKTASESFDRIG 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52008438 52013515 - Hsped.10g15280.1 Hepe10g1528 582075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1528 713 SMART serkin_6 420 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1528 713 Gene3D Phosphorylase Kinase; domain 1 408 491 - -
Hepe10g1528 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1528 713 Pfam Protein kinase domain 421 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1528 713 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Hepe10g1528 713 SUPERFAMILY Protein kinase-like (PK-like) 421 705 IPR011009 -
Hepe10g1528 713 Gene3D Ribonuclease Inhibitor 195 288 IPR032675 -
Hepe10g1528 713 MobiDBLite consensus disorder prediction 288 308 - -
Hepe10g1528 713 ProSiteProfiles Protein kinase domain profile. 416 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1528 713 FunFam Leucine-rich repeat receptor-like protein kinase 399 491 - -
Hepe10g1528 713 SUPERFAMILY L domain-like 32 287 - -
Hepe10g1528 713 FunFam Leucine-rich repeat receptor-like protein kinase 197 292 - -
Hepe10g1528 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 192 - -
Hepe10g1528 713 CDD STKc_IRAK 422 712 - -
Hepe10g1528 713 FunFam Os07g0541700 protein 500 579 - -
Hepe10g1528 713 Gene3D Transferase(Phosphotransferase) domain 1 492 713 - -
Hepe10g1528 713 Pfam Leucine Rich Repeat 124 145 IPR001611 GO:0005515(InterPro)
Hepe10g1528 713 Pfam Leucine Rich Repeat 101 121 IPR001611 GO:0005515(InterPro)
Hepe10g1528 713 Pfam Leucine Rich Repeat 148 170 IPR001611 GO:0005515(InterPro)
Hepe10g1528 713 Pfam Leucine Rich Repeat 197 219 IPR001611 GO:0005515(InterPro)
Hepe10g1528 713 Pfam Leucine Rich Repeat 225 244 IPR001611 GO:0005515(InterPro)
Hepe10g1528 713 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Hepe10g1528 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 170 709 IPR046959 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3423 Hepe-Chr2:83612214 Hepe10g1528 Hepe-Chr10:52008438 1.42e-97 dispersed
Hepe04g0345 Hepe-Chr4:51100816 Hepe10g1528 Hepe-Chr10:52008438 2.80e-109 dispersed
Hepe08g1156 Hepe-Chr8:11715598 Hepe10g1528 Hepe-Chr10:52008438 3.20e-65 dispersed
Hepe10g1528 Hepe-Chr10:52008438 Hepe07g1016 Hepe-Chr7:14323610 9.75e-47 dispersed
Hepe10g1528 Hepe-Chr10:52008438 Hepe01g1165 Hepe-Chr1:76776293 1.40e-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73191 PF00069 Pkinase 3.20E-32 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1528 - - - 0.0