Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1529 ATGGATGTTCCCGAGGCTGAAGAAATGTTTTTGGCTGCTGGTGATGCCAAGTTGCATGGAGAAATGTACAAGAAACTCGCTGCAATTTATTGCCAAGTTATGTCAATATTCCCTTCCTTGGAAGCAGCACGACCTAGGAGCAAAACTGGTATTCAGGCTTTATGTTCATTGCATGTAGCTCTTGAGAAGGCCAAGAATACTCTTCGGCATTGCTCAGAATCCAGTAAACTCTACTTGGCTATAACTGGAGATGCTGTTCTAGCCAAATTTGAAAAGGCAAGATGTTCGCTTGAAGTTAGTCTTATATGCGTTGAAGATATTGTTTCACAATCAATTGGATTTCAGATTCAGCAGATAGTGAACGAACTCAAGGACACTGTTTTCTTACTTGATCCACTGGAGAAACAAGTTGGTGATGATATCATTGCATTACTCTTGCAAGAAAGAAAATTTGATGATTCCAATGGCCATAATGAGCTGGAGCATTTTCATCAGGCTGCCACGAAACTTGGAATTACCTCCTCCAAAGCAGCCCTCACTGAGAGGAGAGCTCTTAAGAGAATTGTAGAACGAGCCCGCTTAGAAGAAGACAAGCGAAAGGAATCAATTGTAGCTTACCTTTTGCATCTCATGAGGAAGTATTCCAAGTTATTTAGAAGTGAGTTGTCGGATGACACTGACTCACAGGGTGGGTCAACTCCTTGTTCTCCTACTGTTCGGTGTTCTCTTGAGGACAATGGACTTGCAGCCAATGGTCAAGTCTTTGAACAGCAGCTTTCGAAGCTTAGTTCTTTCAATTTCAAGCCAAATTATAGGATATCAGGGCAGATGCCTCTTCCACCTGAGGAATTGAGGTGTCCAATATCATTGCAGCTCATGTACGACCCTGTAATAATTGATTCTGGGCAAACATATGAAAGGATCTGCATAGAGAAGTGGTTGAGTGATGGTCATAAAACCTGCCCGAAGACTCAACATAGGCTCTCCCATCTATCGTTGACACCTAATTACTCTGTCAAGGGTCTCATTGCCAATTGGTGTGAACATAACGGAGTTCCTATTCCTGATGGTCCACCAAAGTTTCTTGATCTGAATTATTGGAGGCTTGCATTATCTGATTCTGAGTCTGGAAAATCAACATCTGTGGACAATGTTGGCTCTTGCATGTTGAAGGAAGTTAAGGTAGTTCCTTTGGAGGAAAGTGGAATACTGAAGGTTGCTGAAGAAAATGAAGCATGTGATAATTCATACATGGAGGAGTCATCTGATTTTATTACACTGGAGAGTTGTGTAAATTTTATGACAGTATTGACTGAAGAGGTAGACTCGAGAAAAAAATGTAAGGTTGTGGAGCAGATTAGACTTTCACTGAAGGATGATGATGAAGCTCGAATTTTGATGGGAGCCAATGGCTTTGCTGAAGCACTTATGGAATTCCTAACTTTAGCTCTCATTGAAGAAAACGCTGATGCTCAGGAAAGTGGTGCCATGGCTCTCTTCAATCTATCTGTCAACAACAACAGAAACAGAGAAATGATGATAGCAGCAGGTGTAATCTCGTTGTTGGAGAACATGATTTTGAAATCCAATTTACATGGACCTGCAACAGCCCTATATTTGAATCTTTCATGCCTAGAAGATGCCAAACCAATCATCAGTTCGAGTAGAGCCGTTCCTTTCCTGATCCAGCTGCTTACATGTAATGGTGAATCCCAAACCAAGCTCGATGCACTTCATACCCTTTATAACCTTTCGACCACGCCCTCCATCGTTCCTGTTCTTCTTTCCGCTGGTATTATTGGTGGACTTCAATCCTTTCTCGAAGCTCCTGGCGACAACATGTGGACAGAGACTTCCTTAGCTGTCTTAATAAACTTAGCTTCAAGCCAGTTGGGGATAGAAGAAATAACGTCGGCCCCGGAGCTTATCAGTGGGTTGGCAGCAATTGTGGATGCTGGCGAACGTGCCGAGCAGGAGCAAGCTGTCTCGTGTTTGTTGATTTTGTGTAGAGGGAGTGAAAAATGCAGTCAAATGGTCTTACAGGAAGGAGTGATTCCTGGATTGGTGGCAATTACGGTAAATGGTAGTTCGAGAGGGAAAGTAAAAGCTCAGAAACTTCTGATGTTGTTTAGGGAGCAGAGGCAAAAAGATACCGATATCGTCCAGCAGCGAGACGATAATAGCGACGCTTCCATGGCTGCTGCTCCAGATTCTAAGCCGCTTTGCAAATCGGTGTCGAAGAAAAAGATGGGGAAAGCATTAAGCTTTTTTGCAAAGAGCAAACGATTTTCACTATACCAATGTTGA 2307 42.74 MDVPEAEEMFLAAGDAKLHGEMYKKLAAIYCQVMSIFPSLEAARPRSKTGIQALCSLHVALEKAKNTLRHCSESSKLYLAITGDAVLAKFEKARCSLEVSLICVEDIVSQSIGFQIQQIVNELKDTVFLLDPLEKQVGDDIIALLLQERKFDDSNGHNELEHFHQAATKLGITSSKAALTERRALKRIVERARLEEDKRKESIVAYLLHLMRKYSKLFRSELSDDTDSQGGSTPCSPTVRCSLEDNGLAANGQVFEQQLSKLSSFNFKPNYRISGQMPLPPEELRCPISLQLMYDPVIIDSGQTYERICIEKWLSDGHKTCPKTQHRLSHLSLTPNYSVKGLIANWCEHNGVPIPDGPPKFLDLNYWRLALSDSESGKSTSVDNVGSCMLKEVKVVPLEESGILKVAEENEACDNSYMEESSDFITLESCVNFMTVLTEEVDSRKKCKVVEQIRLSLKDDDEARILMGANGFAEALMEFLTLALIEENADAQESGAMALFNLSVNNNRNREMMIAAGVISLLENMILKSNLHGPATALYLNLSCLEDAKPIISSSRAVPFLIQLLTCNGESQTKLDALHTLYNLSTTPSIVPVLLSAGIIGGLQSFLEAPGDNMWTETSLAVLINLASSQLGIEEITSAPELISGLAAIVDAGERAEQEQAVSCLLILCRGSEKCSQMVLQEGVIPGLVAITVNGSSRGKVKAQKLLMLFREQRQKDTDIVQQRDDNSDASMAAAPDSKPLCKSVSKKKMGKALSFFAKSKRFSLYQC 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52040942 52046121 + Hsped.10g15290.1 Hepe10g1529 582076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1529 768 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g1529 768 SUPERFAMILY ARM repeat 442 699 IPR016024 -
Hepe10g1529 768 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 353 IPR013083 -
Hepe10g1529 768 Gene3D - 404 725 IPR011989 -
Hepe10g1529 768 PANTHER U BOX DOMAIN-CONTAINING 22 714 - -
Hepe10g1529 768 SMART Ubox_2 283 346 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe10g1529 768 FunFam RING-type E3 ubiquitin transferase 279 353 - -
Hepe10g1529 768 MobiDBLite consensus disorder prediction 718 737 - -
Hepe10g1529 768 SUPERFAMILY RING/U-box 274 356 - -
Hepe10g1529 768 CDD RING-Ubox_PUB 281 333 IPR045210 -
Hepe10g1529 768 SMART arm_5 506 544 IPR000225 GO:0005515(InterPro)
Hepe10g1529 768 SMART arm_5 460 504 IPR000225 GO:0005515(InterPro)
Hepe10g1529 768 SMART arm_5 545 586 IPR000225 GO:0005515(InterPro)
Hepe10g1529 768 Pfam U-box domain 281 350 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0724 Hepe-Chr7:8676762 Hepe10g1529 Hepe-Chr10:52040942 3.01e-54 dispersed
Hepe10g1222 Hepe-Chr10:47330852 Hepe10g1529 Hepe-Chr10:52040942 9.13e-36 dispersed
Hepe10g1529 Hepe-Chr10:52040942 Hepe10g1828 Hepe-Chr10:55025134 8.79e-06 dispersed
Hepe10g0096 Hepe-Chr10:891512 Hepe10g1529 Hepe-Chr10:52040942 1.34e-277 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1529 - - - 0.0