Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1540 ATGGAAGAAGAGATCGGAGAAGAGTTCAAGAGGAGTGGTTTCACCTTCGATGAAGAGGAAGAGATTCTCAAGAAATGTCTTACGTTCTGTATCAATTACAATCTAAAGCCTTCGGATATAGTTTCTAGCTGGGAAGTCTACTATCTCAACAGGCAATTAGATGGGTCAGTGGTAGAAATTGCACAGATGGATGGGTTTTTACAACATTTACAGAGTGAGCAAGAAGAAGCAGTCATTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTGGACATGATTTTGAATGACGAGGATGAAGATCCAAAGGAAGACATTCTTAAAACTCCAAATGGGAAATCTCAGAGCCTCCACAAGGATCGATTTGATTTGACACCTTACACAAATGAAGGTTTGTTCTCTTCCGGAAAGCCTTCAAAGCACGTGACACCCTTCGGCCAAAGAACAGAAAAATTTGCTGTGAGGTTCAGCATTAATAGCATGCCTGATAAGGAGACTGCTGAAAAGGAAGATAATTGCGAGAGTGACGAGGATGCAATCATCAAGAAGGTTCGACCCCTGCAAGAATGCTCCTTGACCGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAGGATTGAAGATAGGTTTGATGCTCTTGATAACCGAATCATGAAGCATGCTAAAGCTCTTGCTGCATCTGGGCTCTACAAAGAAGCAGTGGACCCTACAGTTGCTTCACAGGAAAGCATGTTTGCAGTAGGCATGATTTGTTGTGATGGTGAAGGACACTTGAACGATAAGTCCACCTTGTTGCAAAGCAGTGTTGAGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTATCAAACTTAAGTCACTTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTTATTGCGTCCAAACTTGTAGATTCTTTTCCTTTGTCTTCCACTGATGACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGACATCCAGCCAATTAATCAATCTTCTACCCAGTCAGAATTATCGATGATTATTGCGTCAGGCCCCTATACAACAACAGACAACTTATTGTTTGAGCCTTTGTCAGAGTTACTAGCATATGCAAAAAGAAAGCCTCCTCAGCTTCTAATATTGCTTGGGCCATTTGTCGATTCTGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGTTTTGAGGAAATTTTCAACTTTGAAGTTCTCAGAAGGGTGCAAGATTATGTAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCATCTATAAGGGATGATAATCACGAATTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTTAGACTTCAGATATCCAGTCTCCCAAACCCAGGCATCTTTGAAGCAAATCAGGCAAAGATAGCCTGCTGCACTATGGATATTCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACAAAGGGAACAACCAACGACCGCCTGAGCACACTTGCAAGTCATATCCTCCGGCAGCGCAGCTTTTATCCTCTTTACCCTCCAGCCGAAGGAGTTCCACTAGACTTTTCACTTGCCCCAAAAGCTCTCGACATCTCTGAAATACCCGACATTCTCATCCTTCCATCCGATATGAAACACTTTGTGAAGGTTATATCCCTTGGTGAAGGAGGATCAGAGGAAGAGCGAGCAAGCTGCGTGTGTGTGAATCCCGGAAGATTGGCCAAGGGTGAAGGAGGAGGTACTTTTGTAGAGCTTAGTTACTTTGGTAGGCATGACCGGATAAACGCTGCAGTTGTTAGCATATGA 1869 43.39 MEEEIGEEFKRSGFTFDEEEEILKKCLTFCINYNLKPSDIVSSWEVYYLNRQLDGSVVEIAQMDGFLQHLQSEQEEAVIKGEPDLHVYSSKDVDMILNDEDEDPKEDILKTPNGKSQSLHKDRFDLTPYTNEGLFSSGKPSKHVTPFGQRTEKFAVRFSINSMPDKETAEKEDNCESDEDAIIKKVRPLQECSLTVHGSGFGLEPNCRFMYDRIEDRFDALDNRIMKHAKALAASGLYKEAVDPTVASQESMFAVGMICCDGEGHLNDKSTLLQSSVEHSGGQRVRLELSNLSHFSIFPGQVVGIEGHNPSGHCFIASKLVDSFPLSSTDDPILPPAKKIALNHDIQPINQSSTQSELSMIIASGPYTTTDNLLFEPLSELLAYAKRKPPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYVEHMGPDARVLLMPSIRDDNHEFVFPQPAFDIPSDLRLQISSLPNPGIFEANQAKIACCTMDILRHLSGEELSRNLTKGTTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPKALDISEIPDILILPSDMKHFVKVISLGEGGSEEERASCVCVNPGRLAKGEGGGTFVELSYFGRHDRINAAVVSI 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52127204 52133511 - Hsped.10g15400.1 Hepe10g1540 582087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1540 622 FunFam DNA polymerase alpha subunit B 1 75 - -
Hepe10g1540 622 FunFam DNA polymerase alpha subunit B 341 505 - -
Hepe10g1540 622 Gene3D - 514 616 - -
Hepe10g1540 622 Gene3D - 339 512 - -
Hepe10g1540 622 Pfam DNA polymerase alpha subunit B, OB domain 220 321 IPR054300 -
Hepe10g1540 622 PIRSF DNA_pol_alpha_2 1 611 IPR016722 -
Hepe10g1540 622 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 2 618 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
Hepe10g1540 622 Gene3D - 1 76 IPR043034 -
Hepe10g1540 622 Pfam DNA polymerase alpha subunit B N-terminal 3 51 IPR013627 -
Hepe10g1540 622 Pfam DNA polymerase alpha/epsilon subunit B 361 570 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1540 K02321 - csv:101206268 1120.53