Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1553 ATGCAAATGAGTGATAAAAATCAGTGGGTTTTGTTCATTCACTTTGTTCTTCAAATGGGTTCTCCTCGTTTTTTGGTTTTGATTCTTCTTCTCGTCGTTTCTTCTGTCGATTGTCAGCTTAAAGAGTTCATCAGCATAGACTGTGGAGGAACGAAAAACTACACCGACCCAGTTACAGGTTTGGCATGGATTTCCGACGCCGGAATCATGAACGCCGGCGGGCCATCGCCGGTGGAAAACCCAAATGGGAACTTGATGCAGTACCAAACACGGCGGGACTTTCCAATCGACGAGAAGAAGTACTGTTACACTTTGAAAACAGAGGAGAGAAGAAGGTATTTGGTTAGAGCAACTTTTCAATATGGGAGTTTGAAGAATGAAGAGACATATCCTAAATTTCAGCTCTATTTGGATGCAACTAAGTGGTCGACTGTTACGATTTTTGATGCTTCGAGAGTATATGTGAAGGAGATGATCATTAGGGCACCTTCGAATTCCTTTGATGTGTGTATTTGCTGTGCAACTACTGGTTCTCCATTCATATCCACTCTTGAGCTTCGCCCTTTTAATCTTTCAATGTATGCAACTGATTTTGAAGATACTTTCTTCTTGGAAGTTGCTGCTAGAGTGAATTTTGGTGCTTTGACCAAGGATGTGATAAGGTACCCAGATGATCCATATGACAGAATTTGGGATTCAGACCTTGAGAAGAGGCAAAATTATCTTGTGGGAGTGGCTCCTGGGACAGAAAGAATCAGTACTTTGAACAATATTAATGTAATGACAAGAGAATATCCTCCTGTTAAGGTGATGCAAACTGCAGTTCTTGGCACAAAAGGAGTGCTCAGCTACAGGTTGAATCTGGATGATTTTCCTGCCAATGCTAGGGCTTATGCATATTTTGCTGAAATTGAAGATTTGGGTTGGAATGAGACTCGGAAGTTCAAATTGGAGGAACCGAACATTCCGGACTCGAGCAATGCAGTGGTGAATATTGCTGAGAATGCCAATGGGACCTATACTCTTTATGAACCTAGTTATATGAATGTGACTCTGAGTTTCGTGCTTTCGTTCTCGTTTGTCAAGACTCGAGATTCGACTCGAGGACCACTTTTGAATGCATTGGAAATTAGCAGATATGTTGAGATTGCTGCCAAGACTGATAGGCGAGATGAGACTGTTGTGAATGCCTTCCGTACCATGTCAGCAGAGAATGTTTGGACAAACGAAGGCGATCCTTGTGTGCCAACAAGCTGGGAATGGGTGACTTGTACTGCCACGCAACCGCCGAGAATAACTAAAATCGAGCTTTCCCGAAAGAACGTCGAGGGTGAAATTCCTTCTGAGATCAATACTATGGATGGGTTAACGGAATTGTGGTTGGATGGAAATTCCCTTGCAGGACCACTGCCTGACATGAGTAATCTAATAAACTTGAAGATTTTACATCTAGAGAATAACAAATTGACAGGGACATTACCTTCTTACCTGGGTAGTTTGCCCAACTTACAAGAACTATATATTCAAAACAATACTTTTTCGGGAGAAATACCTCTAGAATTATTGGCAAAGAAACTCATCTTCAAGTACGATGGTAACTTTGGACTGCACAAAAGTAAACAATACAAGATGCATTCTAAGCTTATATTAGGAGTTACATTGGGAGTGCTCGTGCTTCTGATTGTTCTACTTTTAGGAAGTTTGGTGTTACTCCGCAAGGTTCGAAGAAAAACGGCGCCTTATCAGAAAAAAGGTGGTTCTCTGCAGACCAGCACCAAGCGCTCTTCTGGCTACTCGATCGGCAAGGGGGATGAAGGCATTGCATACTTTTTATCTCTCTCTGAGCTGGAAGAAGCAACGAATAACTTCTCTAAGAAAATTGGTAAAGGCAGCTTTGGATCAGTCTATTATGGGAAGATGACAGATGGAAAAGAAGTGGCAGTTAAAATCATGTCTGAATCATCTGCTCATGGGAATCAGCAATTTATGACTGAGGTCGCCCTCTTATCAAGAATTCATCACCGAAATTTGGTCCCTTTGATCGGGTACTGCGAAGAAGAACATCAACGGGTTCTGGTTTATGAATATATGCATAATGGAACGTTGCGAGATCACTTATATGGTTTTACTACTCAAAAGCACTTGGACTGGCTGGCTCGGCTGCACATTGCAGAAGATGCAGCTAAAGGGCTCGAGTATTTGCACACGGGATGCAGCCCGAGTATCATTCATCGAGATGTAAAAACAAGCAACATCCTCCTAGACATCAATATGAGAGCAAAAGTTTCGGACTTTGGACTCTCGAGGCAAACCGAGGAAGATTTGACCCATGTATCAAGCGTTGCTCGAGGAACCGTAGGCTACTTGGATCCTGAGTACTATGCTTGTCAACAACTGACCGAAAAGAGTGACGTCTATAGTTTTGGGGTGGTTCTACTTGAACTGATCTCCGGGAAGAAACCTGTCTCACCAGAAGACTATGGCAGTGAATTGAACATCGTTCACTGGGCGAGGTCCCTGGTTCATAAAGGGGACGTGACGAGCATCGTAGATCCATTTCTAGAAGGAAATGTCAAAATAGAATCCGTGTGGAGAATTGCGGAAGTTGCCATACAGTGTGTGCAGCAGCATGGAGTTTCCAGGCCAAGGATGCAGGAAGTCATCTTAGCCATACAAGATGCAATCAAGATTGAACAAGGTACTGAAGGAAACCAGAAACTTTCTTCAGGCAGTGCAAGAGCACAATCATCTCGGAAAACTTTGCTGACGACCTTTCTTGAAATCGAGAGCCCCGACGGTTCCCTCCTTCCTTCTGCAAGATAA 2823 43.11 MQMSDKNQWVLFIHFVLQMGSPRFLVLILLLVVSSVDCQLKEFISIDCGGTKNYTDPVTGLAWISDAGIMNAGGPSPVENPNGNLMQYQTRRDFPIDEKKYCYTLKTEERRRYLVRATFQYGSLKNEETYPKFQLYLDATKWSTVTIFDASRVYVKEMIIRAPSNSFDVCICCATTGSPFISTLELRPFNLSMYATDFEDTFFLEVAARVNFGALTKDVIRYPDDPYDRIWDSDLEKRQNYLVGVAPGTERISTLNNINVMTREYPPVKVMQTAVLGTKGVLSYRLNLDDFPANARAYAYFAEIEDLGWNETRKFKLEEPNIPDSSNAVVNIAENANGTYTLYEPSYMNVTLSFVLSFSFVKTRDSTRGPLLNALEISRYVEIAAKTDRRDETVVNAFRTMSAENVWTNEGDPCVPTSWEWVTCTATQPPRITKIELSRKNVEGEIPSEINTMDGLTELWLDGNSLAGPLPDMSNLINLKILHLENNKLTGTLPSYLGSLPNLQELYIQNNTFSGEIPLELLAKKLIFKYDGNFGLHKSKQYKMHSKLILGVTLGVLVLLIVLLLGSLVLLRKVRRKTAPYQKKGGSLQTSTKRSSGYSIGKGDEGIAYFLSLSELEEATNNFSKKIGKGSFGSVYYGKMTDGKEVAVKIMSESSAHGNQQFMTEVALLSRIHHRNLVPLIGYCEEEHQRVLVYEYMHNGTLRDHLYGFTTQKHLDWLARLHIAEDAAKGLEYLHTGCSPSIIHRDVKTSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVARGTVGYLDPEYYACQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGSELNIVHWARSLVHKGDVTSIVDPFLEGNVKIESVWRIAEVAIQCVQQHGVSRPRMQEVILAIQDAIKIEQGTEGNQKLSSGSARAQSSRKTLLTTFLEIESPDGSLLPSAR 940
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52258371 52264135 + Hsped.10g15530.1 Hepe10g1553 582100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1553 940 FunFam Leucine-rich repeat receptor-like protein kinase 597 696 - -
Hepe10g1553 940 CDD STKc_IRAK 627 888 - -
Hepe10g1553 940 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524(InterPro)
Hepe10g1553 940 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 697 904 - -
Hepe10g1553 940 Gene3D Phosphorylase Kinase; domain 1 602 696 - -
Hepe10g1553 940 Gene3D Transferase(Phosphotransferase) domain 1 697 914 - -
Hepe10g1553 940 SUPERFAMILY Protein kinase-like (PK-like) 607 888 IPR011009 -
Hepe10g1553 940 ProSiteProfiles Protein kinase domain profile. 621 895 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1553 940 Gene3D Ribonuclease Inhibitor 392 531 IPR032675 -
Hepe10g1553 940 Pfam Leucine Rich repeats (2 copies) 478 516 IPR025875 -
Hepe10g1553 940 PANTHER OS07G0107800 PROTEIN-RELATED 473 898 - -
Hepe10g1553 940 Pfam Protein tyrosine and serine/threonine kinase 623 888 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1553 940 SUPERFAMILY L domain-like 414 521 - -
Hepe10g1553 940 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 426 517 - -
Hepe10g1553 940 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1553 940 Pfam Malectin-like domain 46 378 IPR024788 -
Hepe10g1553 940 SMART serkin_6 621 895 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2483 Hepe-Chr2:71356376 Hepe10g1553 Hepe-Chr10:52258371 8.80e-57 dispersed
Hepe03g1287 Hepe-Chr3:68468596 Hepe10g1553 Hepe-Chr10:52258371 6.66e-115 dispersed
Hepe03g1500 Hepe-Chr3:71850723 Hepe10g1553 Hepe-Chr10:52258371 2.53e-74 dispersed
Hepe05g0231 Hepe-Chr5:2722296 Hepe10g1553 Hepe-Chr10:52258371 4.68e-289 dispersed
Hepe06g0167 Hepe-Chr6:6067003 Hepe10g1553 Hepe-Chr10:52258371 3.79e-68 dispersed
Hepe07g0258 Hepe-Chr7:2488341 Hepe10g1553 Hepe-Chr10:52258371 4.11e-69 dispersed
Hepe09g0241 Hepe-Chr9:2088187 Hepe10g1553 Hepe-Chr10:52258371 5.00e-26 dispersed
Hepe10g1471 Hepe-Chr10:51582176 Hepe10g1553 Hepe-Chr10:52258371 7.48e-75 dispersed
Hepe10g1553 Hepe-Chr10:52258371 Hepe06g1881 Hepe-Chr6:70014497 5.72e-74 dispersed
Hepe10g1945 Hepe-Chr10:56330880 Hepe10g1553 Hepe-Chr10:52258371 1.06e-64 dispersed
Hepe10g1553 Hepe-Chr10:52258371 Hepe03g1488 Hepe-Chr3:71709024 1.41e-105 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73193 PF12819 Malectin_like 2.60E-86 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1553 - - - 0.0