Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1555 ATGTCTGAGAATCATGATCCAGAGCTGGCGCTGCAGAGTTCAGGAAGTGGAATTGAAGATGGAGATAAAGGGGTGGAAATTGCGCTCAATGTTGATGTTATGGAGTTATCGTCTGAGACTGCCGTCGACACTGTTGCGGAGAATGACTACGTTTTGCAGTCCTCTGAAGTTTCCAGTGGATTTGTTGTCCCTTCTGAATCAAACCAGGAATCAACGTTGTCGCCAGTGGTTCCTCTTACCGACGGTGCAGAGAATTCGGGACAAGATGATCCTGATGATATTGTAGTAGTCGAAGATGCTGGAAAAGAAGACATGTTTGTGGATTGCCCGGACGAGTTAGTTGGCAATGCTGATAGCAGAGAAGCAGTAGCAGCTGCTGCTGAAACTCAAGGTAGTTTGACGGAGGAAACGCTTTCTGATATGCAAGAATTACAGGATGAGGTAGAAAAAGTTTCTCTTATGCACGAGGTGGAAAACACGAGGACCACTCTGAATAAGACCATTTTTGAGAAAGAAAATGCCATACACGAGTTTGAGGAAGAAAGAGAGGTTTTTGTGCAAGAACTTGTTAGCATTTGTCGCCAACTCAAGATTGCTACTAATCAACAGTCATTGCTCAATGTTACTGGCAGTCAGTTGAATGAGAGTCTTCATTTGCATGGAATTGAGCACGTGGAAGAGAACATTCTGGTTACTAATACTACATTGAAAGACCTGGTAAATGAATGCTCACAATTGGTTAATAGGACTTTAGATGACCGGTTGCAACATGAGGCTACTATAGGAGAACTTCGTAATAATCTTTTAATGAAGGATCAAGAGATTGAATATCTTAATACAAAGGTTGTTGAATTTTCAGTGTCTGATGAAGTTGTTCGTTCTTATGCAAATTCAATCGAAGAGTCTATGAGAGTTTCGTCGGAAAAGGAGAGGGATATGGAGACCACATTATACAGAGTGTTGGCTTCTCTCAACTCAGTATTGAATCAGCATGATTTTCTTGACGATTCTATATCTGAAAAAACACTTCATGTTGAAAGAAGCACTTCTCTGTTAATTGATAATTATAACAAAATCCTTCTGGAAATTAATCAACTCCAAAAATGTTTATCTGGGGCAGAGTCAGACATCGCCTTTACAGAATTTGGAACAATTTTGGCCTCTGCTCGTGATGAGTTTATTGAGCTCAAAACTAATGAGGTAAGCTATGTTGAAAAAATATATCATCTGGAAAACGAAAATAGAAGATTGGCAGATGAGCTAGACAATCACAGATTGAAAGTTGAGACTGTTAATGCAGAACTTGAAAAGGCAAAGAGTGAGCTGGAGCAGGAAAGGATAAGGTGTGTTAATACCAAAGAGAAGCTAACAATGGCTGTGACAAAAGGCAAGGCATTAGTACAGCAACGTGATGCATTAAAACAGTCTCTAGCTGAAAAAGGTCATGAGCTTGAAAAATATTCTATCGAACTACAAGAGAAATCAAATGCTTTGGAGGCTGCCGAAGTAGTTAAGGTTGACTTGGCTAAAAATGAAACTTTAGTTGCATCACTTCAGGAAAATTTGTTGCAAAGGAATATGGTCCTCGAAAGTTTTGAGGATATTATATCTCAACTTGAAGTTCCTCATGAACTTAAGTCAATGGATAGTATGCAAAGACTCAAGTGGCTTGTGGATGAGAAGAAAGTCCTGGAGGCTATTTTTTTGGAGTTTCATAAATTAAAAGATACTCTAAACTTATCTGATTGGCCAGATTTGATTGCACCATATGACCTGAAATCTTCTGTCAGTTGGCTTAAGGAATCATTTTTCCAGGCTAAAGATGACATAATGATCTTGCGAGATGAACTTGCTAAAACAAAAGAAGCAGCACATGGAGAGATTGACCGCATAAGTGCATTACTTTTAATTGAATTACAGGAAAAGAACTATCTCCAGGAGCAGTTGGATGATCTGTTAAGCAAACACGAAAATGTCATGTTAAAAGAGCATCAGACTTCATTGGAGAAGGCTCAAATCATAAAAATGTTACAAGAAGAATCTGGAATGACTGCAGATGATGGAGGGGTCAATGAAACATCGTTGGACTTGAACTTGCTTGTTTACAGATGCTTTCAGAGGATAAAAGAGCAGGCTTGTGCTTCTGCTGAAATCTCTGGTGAATATGTGGAATCTTTTGAAAAGGTTCAAACTCTTATGTATGTCAGTCATCAGGATTTGATGCTCCATGATTTAATTCTAGAAGAGGAGTCTTCTAATTTGAGTAATTGCTCAACTAGGTTAAGATCAATATCTCAAGAACTTAGAGAAGTGAAAGAGGAAAATGACTCTTTGCAGAGAGATCTTCAAAGATCAGAGGAGAAATATGCCATGCTAAGGGAAAAGTTGTCCTTGGCAGTTAAGAAAGGCAAAGGACTGGTTCAGGAGAGGGAAAGTATGAGAGGTCTCTTGGATGATAAGAACATAGAAATAGAGAAGTTGAAACTACAATTAGATAGTCTAGAATCAACAGTTGCTGATTGCAGAAAACAAATCGATTTGTTGTCTATTGATACACAGCGCGTTCTGGAGTTAGAGTCTGAACTTGGTATCTTGAAGGACAAATGCAATCAATTCGAGCAATTCTTATTGGAGAGCAATAATATGTTGCAGAAAGTAATTGGATCAATTGATGGAGTTGTTCTTCCCATTAATATAGTTTTTAAAGAGCCTATAGCCAAGGTGAAGTGGATTGCAGAATACATTAGGGAATCTCATGATGCTAAAATACATACAGAACAAGAATTGGAGAATGTTAAAGAGGAATCGAGTATTATGGAAAGTAAACTAGGAGATACTTTAGCTGCTATGAAATCATTGGAAGATGCATTAACATCTGCTGAGAACAACATTTTTCAACTTTCTGAGGAGAAAAGGGAAATAGAATCTAGTAAGATACACATTGAACAGGAATTACAGAAAGCATTAGATGAAGCCTATTCCCAGTCCAGCAAGTCTGAGGAGGCTTCTTTATCTATGAACCTACTTAAAGAGTCGTTATCACTGGCAGAAAATAAAATATCCGTGCTTGTCAAAGAGAAAGAAGAAGCTGAAGTTTGTAAAGTCACTGCAGAGATGGAGTTGAAGAAAGTAAAGGAAGAAGTGGCTGTTCAGACAGATAAATTGGCAGAGGCCCAGAGACTTATGAACCTACTTCAAGAGTCGTTATCACTGGCAGAAAATAACATATTTGTGCTTGTCAAAGAGAAAGAAGAAGCTGAAGTTTGTAAAGTCACTGCAGAGATGGAGTCAAAGAAAGTAAAGGAGGAAGTGGCTGTTCAGACGGATAAATTGGCAGAGGCCCAGAGAATTATAAACACATTAGAAAAGACATTGACTGAGCTTGAGACCAATGTTGCTTCGCTGACGGAACAGAATGTTGAAGGACAAAGTGCTATAGAGAAGCTAGAGACTGAGCGAAAGATATTGCAAGAGGAAGTCAGCTCTCAAGCGAGCAAAATTGTTGAGGCGGTTGAAACAAGAAAATCTTTGGAAGATGCATTATTTAAGGCAGAAAGTAAAATTTCTATAATTGAAGGCGAGAGGAAATATTCTGAAAATGAGATATTTGCTCTAAATTCCAAATTAAATGCATGCATGGAGGAGTTGGCCGGGACTAATGGCTGCTTTCAGAGCAGATCTGTAGAGTTTGCGGGCTACCTCAATGATCTTCATAAGATTATTGCAGATGAGACATTGTGGACTGCAGTGACAGGATGCTTTGAGAAGAAACTTGAGAGTCTAAGAGAGATGGATAGCATTCTAAAGAACACCAGGGATTGTTTTGTTAACAGCGGCATCATAGATTCTCATTATCACCATGCTGATAAGGATCCGCATGTTATGGAATCCCTCTCCCATGGAAAGCTCCTTGATTTTTCTGTTGAAAGTGAAAGTGGTAAGGTGGTCGTTGAAGATGATGTTGGTAATTTTTCGTCATCTCTTAGAAAAATTATGGAAGGAATCTGGTTAAAGAACAAAATGTTCACAGATTATTTTGAAGGTTTCTCCTCTTCAATGGACGGGTTTATTGCTGATCTTTTAAAAAAAGTGGAAGCAACAAGGGAGGAAGTAGTTTTTGTGTGTGGACACGTTGAATCCTTGAAAGAGAGGGTGAAGAGTCTTGAAATGCATAAACAGGAACAAGAAAATACCAAAGTGATGCTGGAAGATGATGTTTCACTTCTACTGTCTGCCTGTGTTGACACAACAAAAGAACTTCAGTTTGAAATGACCAACCATCTACTTTTACTCAGCTCTATTCCCGAACTCGACAACTTGAAGGATACCATACCCATGGAAAGTAGTGAAACTAGTGGAGTTTCAGCTGCAGAGTCTCAGGCAAAATCTGCTAGTAGCAAATCAGTCGCTGCTGCAGAACAATTATTATCTGCTAGTAGAAAAGTTCGATCTATGGTTAAACAGTTTGAGAGCACCAGTAAGGTTGCAGCAGCTAGAATTCAAGATATGCAGCATATATTGGAAATAACTGAGGCAACTACTGAGAAAGTTAGAGAGGAAAAGGACTTGAACCAAAATATAGTAGTTAAGTTGGAGACTGATTTACAACTATTACAGAGTTCCTGTGTGGAACTTAGGAGTCAACTGGAGGCTTGTCAAGCAAATGAAGAAAAGTTAAAAGAAAGGGAGGTTGAAGTTTCATCATTGTATAATAGTTTGTTGGTGAAAGAACAAGATGCCGAAGACTGCATTTTGTCAGCAATGCAAATGAAAGCCCTCTTTGAGAAAGTTAGAAGGATCGAGATCCCTTTGCCAGAATCAGAAAGCCTAGATCTGAAACAATATGATTCACCTGATGTAAAGAAGCTCTTTTACTTAACTGATTATGTTAATGAGTTACAGAATCAGCTAAACTTATTATCTCATGACGAACAAAAGCTGCAGTCTACAGTGACTACACAAATACTTGCAATTGAACAGCTGAAAGAGGAGGTTGATAGAGCATCAAGGGATCAACTTGATTCAGAAGAGATGAAGAAAAATCTCTCAGAGGTTTCTTTTGCTTTGGAACAAATTGTTAGTTTGTTGCGTAGTAATAACTACAGTGGAGATTCGAAGTCAGATGGCTTGAAGGGACTAGTAAGAACATTGGGAAGGCAGATTCTGGATGTGCTCTCAGAATCTAAAAATTCAAAAACCAACTTTGAGGAACTGAGTAAGAAGTTGACAGAGAGCCAAAAGGTCGTGGATGAACTTACTACCAAGAATAAGCTACTTGAAGAGTCACTTCACGGGCAGACATCAAGGGATCAACTTGATGCAGAGGAGATGAAGAAAGATCTCTCAGAGGTATCTTTTGCTTTGGAACAAATTGTTAGTTTGTTGGGTAGTAATAACTATAGTGGGGATTCGAAGTCAGATGGCTTGAAGGGACTAGTAAGAACATTGGGAAGGCAGATTCTGGATATGCTCTCAGAATCTAAAAATTCAAAAACCAACTTTGAGGAACTGAGTAAGAAGTTGATAGAGAGCCAAAAGGCCGTGGATGAACTAATTACCAAGAATAAGCTACTTGAAGAGTCACTTCACGGGCGGACATCTCAACCAGAGATAAACAAAGAAAGGAGCATCTTTGAAGCACCTTCGTTTCCTTCTGGATCAGAGATATCAGAGATTGAAGATGCGGGACCAGTTGGGAAAAGTGCACTGCCACCTGTTCCATCAGCCTTTGCTACCCATGCACGAAGTTTGCGAAAAGGTTCATCCGATCATCTTGCGATTGACGTAGAAACAGAATCTGATCGTTTAATAGGAAATGGCAGGGAAATTGATCAAGACAAAGGTCATGTGTTCAAATCACTTAATACATCAGGTCTCATTCCAAGACAAGGAAAACTTATTGCAGATCGAATTGATGGAGTTTGGGTTTCTGGTGGTCGAATTCTAATGAGTCGTCCGGGCGCAAGGCTAGGCCTCATAACCTACTGTTTCTTGTTACACATATGGTTACTGGGAACCATTTTGTGA 6027 39.07 MSENHDPELALQSSGSGIEDGDKGVEIALNVDVMELSSETAVDTVAENDYVLQSSEVSSGFVVPSESNQESTLSPVVPLTDGAENSGQDDPDDIVVVEDAGKEDMFVDCPDELVGNADSREAVAAAAETQGSLTEETLSDMQELQDEVEKVSLMHEVENTRTTLNKTIFEKENAIHEFEEEREVFVQELVSICRQLKIATNQQSLLNVTGSQLNESLHLHGIEHVEENILVTNTTLKDLVNECSQLVNRTLDDRLQHEATIGELRNNLLMKDQEIEYLNTKVVEFSVSDEVVRSYANSIEESMRVSSEKERDMETTLYRVLASLNSVLNQHDFLDDSISEKTLHVERSTSLLIDNYNKILLEINQLQKCLSGAESDIAFTEFGTILASARDEFIELKTNEVSYVEKIYHLENENRRLADELDNHRLKVETVNAELEKAKSELEQERIRCVNTKEKLTMAVTKGKALVQQRDALKQSLAEKGHELEKYSIELQEKSNALEAAEVVKVDLAKNETLVASLQENLLQRNMVLESFEDIISQLEVPHELKSMDSMQRLKWLVDEKKVLEAIFLEFHKLKDTLNLSDWPDLIAPYDLKSSVSWLKESFFQAKDDIMILRDELAKTKEAAHGEIDRISALLLIELQEKNYLQEQLDDLLSKHENVMLKEHQTSLEKAQIIKMLQEESGMTADDGGVNETSLDLNLLVYRCFQRIKEQACASAEISGEYVESFEKVQTLMYVSHQDLMLHDLILEEESSNLSNCSTRLRSISQELREVKEENDSLQRDLQRSEEKYAMLREKLSLAVKKGKGLVQERESMRGLLDDKNIEIEKLKLQLDSLESTVADCRKQIDLLSIDTQRVLELESELGILKDKCNQFEQFLLESNNMLQKVIGSIDGVVLPINIVFKEPIAKVKWIAEYIRESHDAKIHTEQELENVKEESSIMESKLGDTLAAMKSLEDALTSAENNIFQLSEEKREIESSKIHIEQELQKALDEAYSQSSKSEEASLSMNLLKESLSLAENKISVLVKEKEEAEVCKVTAEMELKKVKEEVAVQTDKLAEAQRLMNLLQESLSLAENNIFVLVKEKEEAEVCKVTAEMESKKVKEEVAVQTDKLAEAQRIINTLEKTLTELETNVASLTEQNVEGQSAIEKLETERKILQEEVSSQASKIVEAVETRKSLEDALFKAESKISIIEGERKYSENEIFALNSKLNACMEELAGTNGCFQSRSVEFAGYLNDLHKIIADETLWTAVTGCFEKKLESLREMDSILKNTRDCFVNSGIIDSHYHHADKDPHVMESLSHGKLLDFSVESESGKVVVEDDVGNFSSSLRKIMEGIWLKNKMFTDYFEGFSSSMDGFIADLLKKVEATREEVVFVCGHVESLKERVKSLEMHKQEQENTKVMLEDDVSLLLSACVDTTKELQFEMTNHLLLLSSIPELDNLKDTIPMESSETSGVSAAESQAKSASSKSVAAAEQLLSASRKVRSMVKQFESTSKVAAARIQDMQHILEITEATTEKVREEKDLNQNIVVKLETDLQLLQSSCVELRSQLEACQANEEKLKEREVEVSSLYNSLLVKEQDAEDCILSAMQMKALFEKVRRIEIPLPESESLDLKQYDSPDVKKLFYLTDYVNELQNQLNLLSHDEQKLQSTVTTQILAIEQLKEEVDRASRDQLDSEEMKKNLSEVSFALEQIVSLLRSNNYSGDSKSDGLKGLVRTLGRQILDVLSESKNSKTNFEELSKKLTESQKVVDELTTKNKLLEESLHGQTSRDQLDAEEMKKDLSEVSFALEQIVSLLGSNNYSGDSKSDGLKGLVRTLGRQILDMLSESKNSKTNFEELSKKLIESQKAVDELITKNKLLEESLHGRTSQPEINKERSIFEAPSFPSGSEISEIEDAGPVGKSALPPVPSAFATHARSLRKGSSDHLAIDVETESDRLIGNGREIDQDKGHVFKSLNTSGLIPRQGKLIADRIDGVWVSGGRILMSRPGARLGLITYCFLLHIWLLGTIL 2008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52274179 52282718 + Hsped.10g15550.1 Hepe10g1555 582102

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1555 2008 Coils Coil 915 935 - -
Hepe10g1555 2008 Coils Coil 1528 1562 - -
Hepe10g1555 2008 Coils Coil 1006 1075 - -
Hepe10g1555 2008 Coils Coil 1104 1166 - -
Hepe10g1555 2008 Coils Coil 484 504 - -
Hepe10g1555 2008 Coils Coil 943 991 - -
Hepe10g1555 2008 Coils Coil 1630 1678 - -
Hepe10g1555 2008 SUPERFAMILY Tropomyosin 994 1218 - -
Hepe10g1555 2008 Coils Coil 1378 1405 - -
Hepe10g1555 2008 Coils Coil 1834 1854 - -
Hepe10g1555 2008 MobiDBLite consensus disorder prediction 1 22 - -
Hepe10g1555 2008 Coils Coil 810 844 - -
Hepe10g1555 2008 Coils Coil 407 455 - -
Hepe10g1555 2008 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 158 1782 1952 - -
Hepe10g1555 2008 Coils Coil 1735 1762 - -
Hepe10g1555 2008 Coils Coil 754 802 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1555 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2093 Hepe-Chr1:85546273 Hepe10g1555 Hepe-Chr10:52274179 4.69e-29 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1114 . . . . . . . . Cmo04g01902 Cmo18g00713 . Cma18g00726 . Car18g00674 Sed06g1718 Cpe09g00563 Cpe01g01587 Bhi07g01850 Tan04g0116 Cmetu10g1236 Lac13g0100 Hepe10g1555 . . Cla05g02625 Cam05g2815 Cec05g2851 Cco05g2882 Clacu05g2819 Cmu05g2667 Cre05g2783 . . Cone8ag0714 . Lsi04g00640 . . . . Blo11g00999 . . . . . . . . . Cma04g01803 . Car04g01816 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004326 1 1 1 1 1 1 2 1 1 1 1 1 3 1 1 2 1 1 2 1 1 1 1 1 1 1 1 4 5 1 42