Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1619 ATGGAGATCGACGGCGGAGCAGCGGCGGCTCAGCCGCGAAAATTCTCTCTTCCGGTGGACTCCGAACACAAATCCACCAAGTTCAAAATCTTCTCCGTCGCTGCGCCACACATGCGAACGTTTCACCTCTCGTGGATTTCGTTCTGTTCCTGTTTCATTTCCAGCTTCGCGGCGGCGCCACTTCTCCCGGTGATCCGCGACAACCTCAACCTGACCGACACCGACATTGGCAACGCTGGAATCGCCTCCGTCTCCGGCGCCGTCTTCGCCCGAATCATGATGGGTTCCGCCTGCGACATGGTCGGACCACGTCTAGCCTCCGCCTCACTCATCTTGATAACCTCCCCCGCCGTTTACTTAACCTCCATCGCCAACTCCCCTGTTTCGTTCTTCCTCGCCCGTTTCTTCACCGGCTTCTCCCTCGCCACATTCGTCTCCACCCAATTCTGGATGAGCTCCATGTTCTCCTCCACCGTCGTCGGCACTGCAAACGGCGTAGCCGGCGGCTGGGGAAACCTCGGAGGCGGGGCGACCCAACTCATCATGCCATACGTCTTCGCCATCATCGAACAAATCGGCGCCACGAAATTCACAGCATGGAGAATCGCTTTCTTCATCCCAGCGCTTTTCCAAACGATGACCGCCTTTGCCGTTTTGCTCCTCGGGAAGGACACCCCGAACGGGAATTTCCGGCGGCTACAGAAATCCGGCGAGAAAGCGAAAGACAAATTCTCGAAAGTGATTGGAAACGGAGTGAGTAACTACAGAGGGTGGATTTTGGCATTGACTTATGGGTATTGTTTTGGAGTGGAATTGACGATGGATAATATAATTGCGAATTACTTTTACGATCGGTTTGATTTGAATTTGCACACGGCGGGGATAATAGCGGCGAGTTTTGGGCTGGCGAATTTGTTTTCGAGGCCGTACGGCGGCGTTTTGTCGGACGTGGTGGCGAGAAGATATGGGATGAGAGGGAGGCTGTGGGCGCTGTGGTTGGTGCAGAGTTTGGGGGGAGTTTTCTGTGTGGCTCTTGGATTGGTTAATTCGTTGAGCGTTTCGATTGCTGTTATGGTCATTTTTTCGCTCTTTGTTCAAGCTGCTTGTGGACTTACTTTTGGTGTTGTTCCTTTCGTCTCTCGGAGGTCATTGGGAGTAATATCGGGCATGACCGGAGGCGGCGGGAACGTGGGCTCGGTGTTGACTCAGCTGATATTCTTCAGAGGCTCAAAATACACAAAACAAAGAGGAATAAGTCTTATGGGAGTGATGATAATTGCTTGCAGTTTCCCACTTCTCTTCATATTTTTCCCTCAATGGGGAGGCATGTTGTGTGGTCCTTCCTCCAAAATTGCCTCTGAGGAAGACTATTATTTGTCAGAGTGGAGCCCTGAAGAGAAGGCCAAAGGCTTCCATTTGGCTAGCTTGAAGTTTGCTGAGAATAGTCGAACTGAACGAGGTCAAAGTCTAAAGACCACCGCTGATGCTGATGATGATGCTGATATCGAGCCTCCTCATGTCTAA 1524 51.97 MEIDGGAAAAQPRKFSLPVDSEHKSTKFKIFSVAAPHMRTFHLSWISFCSCFISSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDMVGPRLASASLILITSPAVYLTSIANSPVSFFLARFFTGFSLATFVSTQFWMSSMFSSTVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEQIGATKFTAWRIAFFIPALFQTMTAFAVLLLGKDTPNGNFRRLQKSGEKAKDKFSKVIGNGVSNYRGWILALTYGYCFGVELTMDNIIANYFYDRFDLNLHTAGIIAASFGLANLFSRPYGGVLSDVVARRYGMRGRLWALWLVQSLGGVFCVALGLVNSLSVSIAVMVIFSLFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGSKYTKQRGISLMGVMIIACSFPLLFIFFPQWGGMLCGPSSKIASEEDYYLSEWSPEEKAKGFHLASLKFAENSRTERGQSLKTTADADDDADIEPPHV 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 52905987 52909866 + Hsped.10g16190.1 Hepe10g1619 582166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1619 507 FunFam Nitrate transporter 2.1 241 442 - -
Hepe10g1619 507 MobiDBLite consensus disorder prediction 482 507 - -
Hepe10g1619 507 Gene3D MFS general substrate transporter like domains 240 441 IPR036259 -
Hepe10g1619 507 SUPERFAMILY MFS general substrate transporter 35 439 IPR036259 -
Hepe10g1619 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 28 441 IPR020846 GO:0022857(InterPro)
Hepe10g1619 507 MobiDBLite consensus disorder prediction 490 507 - -
Hepe10g1619 507 Pfam Major Facilitator Superfamily 45 401 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe10g1619 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 488 IPR044772 GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Hepe10g1619 507 FunFam High affinity nitrate transporter 2.5 33 229 - -
Hepe10g1619 507 CDD MFS_NRT2_like 41 434 IPR044772 GO:0015112(InterPro)
Hepe10g1619 507 Gene3D MFS general substrate transporter like domains 34 230 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1049 Hepe-Chr10:41855984 Hepe10g1619 Hepe-Chr10:52905987 2.25e-213 dispersed
Hepe10g1050 Hepe-Chr10:41904789 Hepe10g1619 Hepe-Chr10:52905987 9.07e-215 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1619 K02575 - csv:101212365 837.41