Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1640 | ATGTCTTCTTCAAATGATACTTCTTCTCTTTCCCTTGATTCTGTTTCAGATTCAACTTTGTCACCTGAACCTTCGCCTTCGGATTCGGATTCGGATTCTTCTCCTCCTCCTTCTCCGCCGCCACCAGGTGATTTTTCAACCTTGCCACTGAATGATGCCGATGCTGCTGACCCGCCGCTTTTTGCATCGGAAGTTTTAGTTCCGCCTTCCGACGACGAAGCTTCACCACCGTCTTCCTCGCCGCCAGCGTCACCTACTCCTACACCGCCGGCTCCTACTGGCTCCTCCGATTCAAATACAACCGACGGGGATCCACCGCCACCGTCACCGCCTGAAGCTTCTGCTTCACCACCGCCGTCTCCTCGCCCTCGTTCTTCTCCGCCGCCGCCTCATCCACCACCGTCTTCACCACCGCCTCCACAACAGCCGGCTGAGGTTGCCATTGTCGATCCTCCACCTTCCCCTGCTCCGACAAAAAAAAATTCCCCGGCACCTCCAGGAAATCCGCCTTCTCCAATACCTGTGAATAGTCCATCTGCTCCGGCCAAAAACGACGCCGCTTCGGAACCAGAAACCGGCGTGGAACTTCCACCATCTGAATCGACAGAACCTCTTCCTCCAGAAAATCCAGTCGTGATTCCTTCACCAGGTGCAAATCCGTCGACGGCGAAACAAACTCCGAGTCTACCTCAAGGAATAACTACTCCAACATCAGAGTCCAACATTCTTCCACCTCCAACAACCACAACCACAACCACATCCACTCATACTCCAAATAACTCACCTCATTCCGGAGACTCAACGCCAGCGAAATCATCACCATCAGGGCACTCTGATGTTCCATCGTCAGGTTCAAGTAGTCAGACTAATGTTGCAGTAGGCGTTGCAGTAGCCGGAGCTTTTGTAATTGCTTTTGTTGCCGTGTTCTTTATGTTCAGAAGGAAGAAGAAAGCACGGGGAGATCTATACACTGGCCCGTACTTGCCTCCAAATAACTTCTGCGTCAAATCAGATGGAAATTACTATCCGCATCAACATATGGACAACTCTGGTTCGGCTGAAGGATTCTATACTCAGGTCCCGCATACTCCTGTTGGAAATAGCTTTGTGAGTCAAAAAGGAACAGGATACAACAGTGGGAGTGGGAGTGGAATGGAGTCAGGTGTGATAAACAGTGCTAAGTTCTTCTTTAGCTATGAGGAATTGATGGAAGTTACTTCTGGATTTTCACGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGCGTTTACAAGGGTTGGCTTCCAGACGGGAAACCAGTGGCTGTGAAGCAACTAAAGGCTGGAAGTGGACAAGGGGAGAGGGAATTCAAGGCGGAAGTTGAGATTATCAGTCGTGTTCATCATCGGTATTTGGTGTCTTTAGTTGGCTACTGCGTCTCTGAGCATCATAGATTGCTCATCTATGAGTTTGTTTCTAATAAGACTCTTGAGCATCATCTACATGGCGGTGATGGAGTGCCCGTGTTAGATTGGTCCCATAGACTTAGAGTCGCTTTAGGAGCTGCAAAGGGTTTGGCATATTTGCATGAAGATTGCCATCCCAAGATTATTCACAGAGACATCAAGTCAGCCAATATTTTGCTAGATGATAATTTTGATGCACAGGTCGCAGATTTTGGACTGGCAAAACTGACAAACGATACAAACACCCACGTTTCGACTCGTGTCATGGGGACATTTGGAGTTTGGTCGAATGGGTATGTAAATAAATGTACAAGCATTTCAAATTTGCTCTCTTATTTGAGATCCATCTTGAACGGATTCAACAATGTTCTATGTTATGAAATGTTGCAGGCTCGTCCACTCCTCCTTCACGCACTTGAAACTGGGGAGTTCGACGAATTGATAGATAAACGCCTTGAAAAACGCTATGTGGAAAATGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGCGTTCGTCATTCGGCAGCCAAAAGGCCTCGCATGGCTCAGGTGGTGAGATCACTAGACATCGAAAATGACATGTCTGATCTCTCCAATGGTGTCAAATTTGGCCAGAGCACAATTTATGATTCTGGACAATACAATCAAGACATTTCTAAATTCAGGAGAATGGCGCTCGGTAGCGGAGGTAGCTCCGAATACGACATTTGCAGTAACGAATACACTTCCAGAGAAATGACTGCAAGTGGTGAATCATGGAGATTTCAAAATAACTCAAGTGGTGAATCAGAAACTCGAGCTTTTAACGGACAAAGTCGCAGCGGTCGACAACTCTAA | 2286 | 47.51 | MSSSNDTSSLSLDSVSDSTLSPEPSPSDSDSDSSPPPSPPPPGDFSTLPLNDADAADPPLFASEVLVPPSDDEASPPSSSPPASPTPTPPAPTGSSDSNTTDGDPPPPSPPEASASPPPSPRPRSSPPPPHPPPSSPPPPQQPAEVAIVDPPPSPAPTKKNSPAPPGNPPSPIPVNSPSAPAKNDAASEPETGVELPPSESTEPLPPENPVVIPSPGANPSTAKQTPSLPQGITTPTSESNILPPPTTTTTTTSTHTPNNSPHSGDSTPAKSSPSGHSDVPSSGSSSQTNVAVGVAVAGAFVIAFVAVFFMFRRKKKARGDLYTGPYLPPNNFCVKSDGNYYPHQHMDNSGSAEGFYTQVPHTPVGNSFVSQKGTGYNSGSGSGMESGVINSAKFFFSYEELMEVTSGFSRQNILGEGGFGCVYKGWLPDGKPVAVKQLKAGSGQGEREFKAEVEIISRVHHRYLVSLVGYCVSEHHRLLIYEFVSNKTLEHHLHGGDGVPVLDWSHRLRVALGAAKGLAYLHEDCHPKIIHRDIKSANILLDDNFDAQVADFGLAKLTNDTNTHVSTRVMGTFGVWSNGYVNKCTSISNLLSYLRSILNGFNNVLCYEMLQARPLLLHALETGEFDELIDKRLEKRYVENEMFRMIEAAAACVRHSAAKRPRMAQVVRSLDIENDMSDLSNGVKFGQSTIYDSGQYNQDISKFRRMALGSGGSSEYDICSNEYTSREMTASGESWRFQNNSSGESETRAFNGQSRSGRQL | 761 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 53099303 | 53102344 | - | Hsped.10g16400.1 | Hepe10g1640 | 582187 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1640 | 761 | FunFam | Protein kinase superfamily protein | 485 | 558 | - | - | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 103 | 177 | - | - | |
Hepe10g1640 | 761 | Pfam | Protein tyrosine and serine/threonine kinase | 412 | 671 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe10g1640 | 761 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 530 | 542 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe10g1640 | 761 | SUPERFAMILY | Protein kinase-like (PK-like) | 387 | 671 | IPR011009 | - | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 74 | 92 | - | - | |
Hepe10g1640 | 761 | Gene3D | Phosphorylase Kinase; domain 1 | 377 | 484 | - | - | |
Hepe10g1640 | 761 | SMART | serkin_6 | 409 | 673 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 737 | 761 | - | - | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 200 | 214 | - | - | |
Hepe10g1640 | 761 | Gene3D | Transferase(Phosphotransferase) domain 1 | 485 | 683 | - | - | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 29 | 46 | - | - | |
Hepe10g1640 | 761 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 382 | 484 | - | - | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 215 | 288 | - | - | |
Hepe10g1640 | 761 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 251 | 707 | IPR047117 | - | |
Hepe10g1640 | 761 | ProSiteProfiles | Protein kinase domain profile. | 409 | 673 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g1640 | 761 | ProSitePatterns | Protein kinases ATP-binding region signature. | 415 | 437 | IPR017441 | GO:0005524(InterPro) | |
Hepe10g1640 | 761 | MobiDBLite | consensus disorder prediction | 1 | 288 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe10g1640 | Hepe-Chr10:53099303 | Hepe10g1850 | Hepe-Chr10:55220573 | 1.88e-116 | dispersed | |
Hepe10g1640 | Hepe-Chr10:53099303 | Hepe02g3246 | Hepe-Chr2:82026244 | 2.67e-124 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73196 | PF07714 | PK_Tyr_Ser-Thr | 9.10E-31 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1640 | - | - | - | 0.0 |