Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1640 ATGTCTTCTTCAAATGATACTTCTTCTCTTTCCCTTGATTCTGTTTCAGATTCAACTTTGTCACCTGAACCTTCGCCTTCGGATTCGGATTCGGATTCTTCTCCTCCTCCTTCTCCGCCGCCACCAGGTGATTTTTCAACCTTGCCACTGAATGATGCCGATGCTGCTGACCCGCCGCTTTTTGCATCGGAAGTTTTAGTTCCGCCTTCCGACGACGAAGCTTCACCACCGTCTTCCTCGCCGCCAGCGTCACCTACTCCTACACCGCCGGCTCCTACTGGCTCCTCCGATTCAAATACAACCGACGGGGATCCACCGCCACCGTCACCGCCTGAAGCTTCTGCTTCACCACCGCCGTCTCCTCGCCCTCGTTCTTCTCCGCCGCCGCCTCATCCACCACCGTCTTCACCACCGCCTCCACAACAGCCGGCTGAGGTTGCCATTGTCGATCCTCCACCTTCCCCTGCTCCGACAAAAAAAAATTCCCCGGCACCTCCAGGAAATCCGCCTTCTCCAATACCTGTGAATAGTCCATCTGCTCCGGCCAAAAACGACGCCGCTTCGGAACCAGAAACCGGCGTGGAACTTCCACCATCTGAATCGACAGAACCTCTTCCTCCAGAAAATCCAGTCGTGATTCCTTCACCAGGTGCAAATCCGTCGACGGCGAAACAAACTCCGAGTCTACCTCAAGGAATAACTACTCCAACATCAGAGTCCAACATTCTTCCACCTCCAACAACCACAACCACAACCACATCCACTCATACTCCAAATAACTCACCTCATTCCGGAGACTCAACGCCAGCGAAATCATCACCATCAGGGCACTCTGATGTTCCATCGTCAGGTTCAAGTAGTCAGACTAATGTTGCAGTAGGCGTTGCAGTAGCCGGAGCTTTTGTAATTGCTTTTGTTGCCGTGTTCTTTATGTTCAGAAGGAAGAAGAAAGCACGGGGAGATCTATACACTGGCCCGTACTTGCCTCCAAATAACTTCTGCGTCAAATCAGATGGAAATTACTATCCGCATCAACATATGGACAACTCTGGTTCGGCTGAAGGATTCTATACTCAGGTCCCGCATACTCCTGTTGGAAATAGCTTTGTGAGTCAAAAAGGAACAGGATACAACAGTGGGAGTGGGAGTGGAATGGAGTCAGGTGTGATAAACAGTGCTAAGTTCTTCTTTAGCTATGAGGAATTGATGGAAGTTACTTCTGGATTTTCACGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGCGTTTACAAGGGTTGGCTTCCAGACGGGAAACCAGTGGCTGTGAAGCAACTAAAGGCTGGAAGTGGACAAGGGGAGAGGGAATTCAAGGCGGAAGTTGAGATTATCAGTCGTGTTCATCATCGGTATTTGGTGTCTTTAGTTGGCTACTGCGTCTCTGAGCATCATAGATTGCTCATCTATGAGTTTGTTTCTAATAAGACTCTTGAGCATCATCTACATGGCGGTGATGGAGTGCCCGTGTTAGATTGGTCCCATAGACTTAGAGTCGCTTTAGGAGCTGCAAAGGGTTTGGCATATTTGCATGAAGATTGCCATCCCAAGATTATTCACAGAGACATCAAGTCAGCCAATATTTTGCTAGATGATAATTTTGATGCACAGGTCGCAGATTTTGGACTGGCAAAACTGACAAACGATACAAACACCCACGTTTCGACTCGTGTCATGGGGACATTTGGAGTTTGGTCGAATGGGTATGTAAATAAATGTACAAGCATTTCAAATTTGCTCTCTTATTTGAGATCCATCTTGAACGGATTCAACAATGTTCTATGTTATGAAATGTTGCAGGCTCGTCCACTCCTCCTTCACGCACTTGAAACTGGGGAGTTCGACGAATTGATAGATAAACGCCTTGAAAAACGCTATGTGGAAAATGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGCGTTCGTCATTCGGCAGCCAAAAGGCCTCGCATGGCTCAGGTGGTGAGATCACTAGACATCGAAAATGACATGTCTGATCTCTCCAATGGTGTCAAATTTGGCCAGAGCACAATTTATGATTCTGGACAATACAATCAAGACATTTCTAAATTCAGGAGAATGGCGCTCGGTAGCGGAGGTAGCTCCGAATACGACATTTGCAGTAACGAATACACTTCCAGAGAAATGACTGCAAGTGGTGAATCATGGAGATTTCAAAATAACTCAAGTGGTGAATCAGAAACTCGAGCTTTTAACGGACAAAGTCGCAGCGGTCGACAACTCTAA 2286 47.51 MSSSNDTSSLSLDSVSDSTLSPEPSPSDSDSDSSPPPSPPPPGDFSTLPLNDADAADPPLFASEVLVPPSDDEASPPSSSPPASPTPTPPAPTGSSDSNTTDGDPPPPSPPEASASPPPSPRPRSSPPPPHPPPSSPPPPQQPAEVAIVDPPPSPAPTKKNSPAPPGNPPSPIPVNSPSAPAKNDAASEPETGVELPPSESTEPLPPENPVVIPSPGANPSTAKQTPSLPQGITTPTSESNILPPPTTTTTTTSTHTPNNSPHSGDSTPAKSSPSGHSDVPSSGSSSQTNVAVGVAVAGAFVIAFVAVFFMFRRKKKARGDLYTGPYLPPNNFCVKSDGNYYPHQHMDNSGSAEGFYTQVPHTPVGNSFVSQKGTGYNSGSGSGMESGVINSAKFFFSYEELMEVTSGFSRQNILGEGGFGCVYKGWLPDGKPVAVKQLKAGSGQGEREFKAEVEIISRVHHRYLVSLVGYCVSEHHRLLIYEFVSNKTLEHHLHGGDGVPVLDWSHRLRVALGAAKGLAYLHEDCHPKIIHRDIKSANILLDDNFDAQVADFGLAKLTNDTNTHVSTRVMGTFGVWSNGYVNKCTSISNLLSYLRSILNGFNNVLCYEMLQARPLLLHALETGEFDELIDKRLEKRYVENEMFRMIEAAAACVRHSAAKRPRMAQVVRSLDIENDMSDLSNGVKFGQSTIYDSGQYNQDISKFRRMALGSGGSSEYDICSNEYTSREMTASGESWRFQNNSSGESETRAFNGQSRSGRQL 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 53099303 53102344 - Hsped.10g16400.1 Hepe10g1640 582187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1640 761 FunFam Protein kinase superfamily protein 485 558 - -
Hepe10g1640 761 MobiDBLite consensus disorder prediction 103 177 - -
Hepe10g1640 761 Pfam Protein tyrosine and serine/threonine kinase 412 671 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1640 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1640 761 SUPERFAMILY Protein kinase-like (PK-like) 387 671 IPR011009 -
Hepe10g1640 761 MobiDBLite consensus disorder prediction 74 92 - -
Hepe10g1640 761 Gene3D Phosphorylase Kinase; domain 1 377 484 - -
Hepe10g1640 761 SMART serkin_6 409 673 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1640 761 MobiDBLite consensus disorder prediction 1 28 - -
Hepe10g1640 761 MobiDBLite consensus disorder prediction 737 761 - -
Hepe10g1640 761 MobiDBLite consensus disorder prediction 200 214 - -
Hepe10g1640 761 Gene3D Transferase(Phosphotransferase) domain 1 485 683 - -
Hepe10g1640 761 MobiDBLite consensus disorder prediction 29 46 - -
Hepe10g1640 761 FunFam Proline-rich receptor-like protein kinase PERK8 382 484 - -
Hepe10g1640 761 MobiDBLite consensus disorder prediction 215 288 - -
Hepe10g1640 761 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 251 707 IPR047117 -
Hepe10g1640 761 ProSiteProfiles Protein kinase domain profile. 409 673 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1640 761 ProSitePatterns Protein kinases ATP-binding region signature. 415 437 IPR017441 GO:0005524(InterPro)
Hepe10g1640 761 MobiDBLite consensus disorder prediction 1 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1640 Hepe-Chr10:53099303 Hepe10g1850 Hepe-Chr10:55220573 1.88e-116 dispersed
Hepe10g1640 Hepe-Chr10:53099303 Hepe02g3246 Hepe-Chr2:82026244 2.67e-124 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73196 PF07714 PK_Tyr_Ser-Thr 9.10E-31 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1640 - - - 0.0