Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1680 | ATGGCCAGAATCCCTGTTTTCTCCCGCCGGCGGAGGTCCGATCAGATCGACGCTCTAGATCGTTTGATCCCCACCTCTGATTCCGAGGTTCATGTTCTCGCCGTCGACGATAGTCTCATCGATCGTACAGTAATTGAACGTCTCCTCCGCCTCACCGCCTGCCGTGGTAAGTTCAATTTCTTTACAAATTTCATCCCTTTTTTCATTTTCCTTTCTGGGTTTTGTTTGTTTCTCGAGAAATTCAATTGGGTTCTGTTTGGAATTGCAGTTACTGCAGTGGATAGTGGAATTAGAGCTCTACAATATCTCGGATTACAAGACGAAACAAAAAAACAGAGCTTGAAGGTTGATATGATCATCACTGATTACTGTATGCCCGGAATGACAGGCTACGAATTGCTCAAGAAAATTAAGGAATCTTCAACACTGAGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGATAGATGTTTAGAGGAAGGAGCAGAGGATTTCATAGTGAAACCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAGGATCGGAAGTGAAAGAAGTGGCATCAACAAAAGGAAGCTACCAGAGCCGTGTGATCAAACCTCATCTGATTCCTTTCCATCATCACCGTTAGATTCGCTTCAATCCACACCATCATCATCAGAGCCATCATCTCCCACATCCACTCTTCAATCCGACGGCTCTAAATGA | 747 | 44.98 | MARIPVFSRRRRSDQIDALDRLIPTSDSEVHVLAVDDSLIDRTVIERLLRLTACRGKFNFFTNFIPFFIFLSGFCLFLEKFNWVLFGIAVTAVDSGIRALQYLGLQDETKKQSLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDERIGSERSGINKRKLPEPCDQTSSDSFPSSPLDSLQSTPSSSEPSSPTSTLQSDGSK | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 53515929 | 53517115 | + | Hsped.10g16800.1 | Hepe10g1680 | 582227 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1680 | 248 | CDD | REC_typeA_ARR | 32 | 184 | - | - | |
Hepe10g1680 | 248 | Pfam | Response regulator receiver domain | 87 | 181 | IPR001789 | GO:0000160(InterPro) | |
Hepe10g1680 | 248 | SUPERFAMILY | CheY-like | 86 | 188 | IPR011006 | - | |
Hepe10g1680 | 248 | SMART | REC_2 | 67 | 185 | IPR001789 | GO:0000160(InterPro) | |
Hepe10g1680 | 248 | Gene3D | - | 30 | 214 | - | - | |
Hepe10g1680 | 248 | MobiDBLite | consensus disorder prediction | 211 | 248 | - | - | |
Hepe10g1680 | 248 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 28 | 230 | IPR045279 | GO:0009736(InterPro) | |
Hepe10g1680 | 248 | MobiDBLite | consensus disorder prediction | 197 | 248 | - | - | |
Hepe10g1680 | 248 | ProSiteProfiles | Response regulatory domain profile. | 31 | 189 | IPR001789 | GO:0000160(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe10g1680 | Hepe-Chr10:53515929 | Hepe03g0399 | Hepe-Chr3:5697466 | 1.01e-06 | dispersed | |
Hepe10g1680 | Hepe-Chr10:53515929 | Hepe09g0164 | Hepe-Chr9:1312143 | 1.18e-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56539 | PF00072 | Response_reg | 4.60E-18 | CL0304 | Hepe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1680 | K14492 | - | csv:101209506 | 299.671 |