Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1700 ATGCCTTCTTTTACTGTTTCCGCCATTGTTGTCTTCTTCCTTCAGCTCCTTCCTCTGTTTTCAGCAGATCACTGTCCGCCTTTCTCTTCCAAACCCATTTTCCCCTTTTCATCTCTTCCTGGTTATGGCCATCCTTCTTTTCAGGTGCGTTGTTCTTCACCCCACTCTGTTATTTCCATTAATGGGCTTCCTTTTTCTCTGTTGAGTTTCAATTCGACCTCCACCACTCTCCTCCTTTCCCCTCTTCCACTCACTGTCAAAGAATCGAATCACAGTTGTTTTTCTGTTCGTTTCTCTTCGATTCCGAGCCGTTCGATTAATCTCTCCGGCTCCCCGTTTCAAATCTCAGATGGGTATTGTTCTAGACTCTCTCTTCTCAACCCTTGTTCGCCTCTGCATCTACCCAATTGCAGCCATTGTCCTTGGGAGTGCAGTCTTATCAAGAAACCAGTTAATTTGCTCCATGGATGCGGAGTCCAGCATCAGCCTGTCTCGGATCAAGGTTGTCAGGACGAGGTTTTGGAGTATTTGGATAAAATTCTCCGATTAGGGCTTGAAGTCGAGTGGGATACGAATCAGGATCCTTACTTTAGGAAATGTATTGATTGTGAAGCTAAAAATGGTGTCTGTGGCTTTGATTCTTCAGACCCAGATAGGAAATTCGTTTGCTATCATACTCAAACTCGATACTCATACCCTAATCGAATCGCGATTTTGTCCTCTGTTTTTGCGTTGTTGTGCTTGTTGTTGGTTATTGCAGTGACGGTAACTATTTTAAGGTCGAGATGGTTGAGATCCCTCGCCATTGAAGTAGACCCCACAACCCAATTCCTCAGTCGTCATCGCTCGCCGAATCTTCTCCCGCCGGTATTCCCCTACGAAGAACTCGAATCTTCGACGAATCGATTCGACCCCAAGAGGAAACTGGGCGACGGTGGATTTGGATCTGTTTATTTGGGTCAGCTCAACGATGGCCGATTAGTCGCCGTGAAATATCTTCACAAGCATCACGCCGCCGCCGCCGCTCCCTCCGGCAAGGCTTTCTTCACCAAGTCGTTCTGTAATGAAATCTTGATTCTGTCTTCGATTAATCACCCGAATCTGGTTAGGTTACATGGGTATTGTAGTGATCCGAGAGGGCTTATTCTTGTGTATGATTATGTGCCAAATGGGACGCTCGCCGATCATCTCCATGGCCCTAAGAGCTTGTATCCGAAGGGATCTCTGACGTGGGAAGTGAGGATTGAAATTGCTCTGCAAATCGCCATGGCTATGGAGTACTTGCATTTCTCTGTGGTGCCGCCGATTGTTCACAGAGACATTACTTCTTCAAACATTTTTGTTGAGAAAGATATGAGAATCAAAGTTGGGGATTTTGGGCTTTCGAGGCTGCTGGTTTTCTCAGATACGACGTCGTCTTCATCTGGGTATGTCTGCACCGGACCTCAGGGGACGCCCGGTTACTTGGATCCGGATTACCATCGGTCGTTCCGGTTGACGGAGAAGAGTGACGTGTACAGCTTCGGAGTGGTGTTGTTGGAGCTGATTTCTGGTCTGAAAGCGGTGGATCAGAGTCGAGAGAGAAGAGAAATGGCGCTGGCGGATCTGGTAGTGTCGAAGATTCAGATGGGTCAGCTTCATCAGGTGGTGGACTCCGTTTTGGGTATCGACGGCGAGGTGATCGACGGCGTTGAGGCGGTGGCGGAGCTGGCGTTCCGGTGCGTGGCGGCGGACAAGGACGACCGCCCAGACGCCAAGGAGGTCGTGGAGGAGCTCAGGCGGATTCGGAACCGCACACGTGGAGGGGTCCGGTCGTCGGTTTCAAACGTGTGTGCTGACGTGGCTAGAAGTTGA 1854 49.3 MPSFTVSAIVVFFLQLLPLFSADHCPPFSSKPIFPFSSLPGYGHPSFQVRCSSPHSVISINGLPFSLLSFNSTSTTLLLSPLPLTVKESNHSCFSVRFSSIPSRSINLSGSPFQISDGYCSRLSLLNPCSPLHLPNCSHCPWECSLIKKPVNLLHGCGVQHQPVSDQGCQDEVLEYLDKILRLGLEVEWDTNQDPYFRKCIDCEAKNGVCGFDSSDPDRKFVCYHTQTRYSYPNRIAILSSVFALLCLLLVIAVTVTILRSRWLRSLAIEVDPTTQFLSRHRSPNLLPPVFPYEELESSTNRFDPKRKLGDGGFGSVYLGQLNDGRLVAVKYLHKHHAAAAAPSGKAFFTKSFCNEILILSSINHPNLVRLHGYCSDPRGLILVYDYVPNGTLADHLHGPKSLYPKGSLTWEVRIEIALQIAMAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVFSDTTSSSSGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRERREMALADLVVSKIQMGQLHQVVDSVLGIDGEVIDGVEAVAELAFRCVAADKDDRPDAKEVVEELRRIRNRTRGGVRSSVSNVCADVARS 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 53696935 53698788 - Hsped.10g17000.1 Hepe10g1700 582247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1700 617 Pfam Wall-associated receptor kinase C-terminal 162 226 IPR032872 -
Hepe10g1700 617 ProSitePatterns Tyrosine protein kinases specific active-site signature. 436 448 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1700 617 Gene3D Transferase(Phosphotransferase) domain 1 388 611 - -
Hepe10g1700 617 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524(InterPro)
Hepe10g1700 617 SUPERFAMILY Protein kinase-like (PK-like) 283 592 IPR011009 -
Hepe10g1700 617 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 34 600 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Hepe10g1700 617 CDD STKc_IRAK 309 595 - -
Hepe10g1700 617 Gene3D Phosphorylase Kinase; domain 1 276 387 - -
Hepe10g1700 617 FunFam Putative serine/threonine-protein kinase At1g18390 family 279 387 - -
Hepe10g1700 617 Pfam Protein kinase domain 305 590 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1700 617 ProSiteProfiles Protein kinase domain profile. 303 595 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g2377 Hepe-Chr7:68132119 Hepe10g1700 Hepe-Chr10:53696935 2.74e-83 dispersed
Hepe10g1700 Hepe-Chr10:53696935 Hepe03g1287 Hepe-Chr3:68468596 5.94e-59 dispersed
Hepe10g1700 Hepe-Chr10:53696935 Hepe01g1169 Hepe-Chr1:76830752 1.54e-87 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73197 PF00069 Pkinase 3.80E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1700 - - - 0.0