Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1709 | ATGAGTCGCAAGAGAGACAAACCCTACCCTTCCCCTCACGTTCACACCTCCGTCGCTAAGAGGCGGCGCCATCCTCCGCTGGTACAGTCGCCGGCGGAGGATGATTATATGGACAAGCCCTTACCGAAGCCCGCGCCACCGCCTGCCCTAGTCGTCGTTGACCTACCTTCACACTGCTCGGTGCTTGACTTGAAGTCCCGATTTGAGATCTACGGATCCATCTCCCGCATCCGCATCGACCGTGATTGCGTTGGCTACATCACTTATCGCACCAAAGACTCCGCTGATGCTGCCATGGCCGCCGCCGTCGACCCCTCCTTCGGCTTCACCATTGATTCCAAAAAGGTTCAGGTATTATGGGCGAATGATCCTCAAGTTCATTGGAGACAAGGGATTAACGTTGGTGTTAACAAGAATAAGGAATTGTCATCGAAGCTCTTGCGGGCAGAAGTGCCACTGAGCAGACATGGAAGAGGCAATAAGCTTGCTTCAACCATTGTTAACTCTAGAAAAAGTGACAGTTCTTCAAGGTCGGATGTGCCTTTCAAGGGCAGGGAAGTTGTTGCTTATGATGATATTCTCTAA | 585 | 51.79 | MSRKRDKPYPSPHVHTSVAKRRRHPPLVQSPAEDDYMDKPLPKPAPPPALVVVDLPSHCSVLDLKSRFEIYGSISRIRIDRDCVGYITYRTKDSADAAMAAAVDPSFGFTIDSKKVQVLWANDPQVHWRQGINVGVNKNKELSSKLLRAEVPLSRHGRGNKLASTIVNSRKSDSSSRSDVPFKGREVVAYDDIL | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 53809385 | 53810207 | - | Hsped.10g17090.1 | Hepe10g1709 | 582256 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1709 | 194 | Pfam | RNA recognition motif | 50 | 101 | IPR000504 | GO:0003723(InterPro) | |
Hepe10g1709 | 194 | SUPERFAMILY | RNA-binding domain, RBD | 29 | 133 | IPR035979 | GO:0003676(InterPro) | |
Hepe10g1709 | 194 | Gene3D | - | 29 | 178 | IPR012677 | - | |
Hepe10g1709 | 194 | SMART | rrm1_1 | 49 | 119 | IPR000504 | GO:0003723(InterPro) | |
Hepe10g1709 | 194 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Hepe10g1709 | 194 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 48 | 123 | IPR000504 | GO:0003723(InterPro) | |
Hepe10g1709 | 194 | CDD | RRM_SF | 52 | 94 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1709 | - | - | - | 0.0 |