Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1715 ATGGAGGTAATCGCTGAAGATGGAAAAGTTGAGTCTCGGGAAGTGAGCGAATCGAAGGGGAAGAAGAAGCAGAAGAGCAACAAGGAACAGGTTGAAACTGTGGAAGAGGAGACTGGTTGTTGGATTGCTTTGAGGATTTTTGGCAGCTGCATTTCTTCGAGATCCAAAGTTGATAGTTCGATCAGTGGGACTAGTATTAACTATGCTGAAAGCAAGTCTACGGCTGATACAAGTAGAGACCAACCAACGGCAACACCTCGAGACATATCTTCTACAAACACAAGTATGAGTAATGCAGAGAGTAATTCATCCACTTCCAAACTAGAAGAGGAACTGAAAATTTCTCCTCATCTACGGAAATTTTCATTTAATGATCTTAAGTTGGCGACAAGGAACTTCAGACCGGAGAGTCTTCTTGGTGAAGGTGGCTTTGGTTGTGTTTTTAAGGGTTGGGTCGAAGAAAATGGAACTGCTCCAGTTAAACCTGGCACAGGACTCACTGTTGCTGTTAAAACCCTCAACCATGATGGTCTTCAGGGCCATAAAGAGTGGATGGCTGAAGTGAATTTTCTTAGTGATCTCAAACATCCCAACTTGGTCAAACTTGTCGGTTACTGCAATGAAGATGATCAAAGACTACTTGTATATGAGTTCATGCCTAGAGGAAGCCTGGAGAATCATCTTTTCCGGAGATCTCTACCTCTTCCGTGGTCTATTAGGATGAAAATTGCACTAGGTGCTGCCAGGGGTCTTGCTTTTCTTCACGAAGAAGCAAAAAGGCCGGTCATATATCGTGATTTTAAAACATCCAACATCCTATTAGATGCCGAATACAATGCCAAGCTTTCTGATTTTGGTCTTGCAAAAGATGGACCCGATGGAGATAAAACCCATGTCTCTACTCGTGTGATGGGAACGTATGGCTATGCAGCTCCAGAATACGTAATGACTGGACATCTTACATCAAGGAGTGATGTTTACAGTTTCGGAGTGGTTCTTCTCGAAATGTTAACTGGCAGAAGATCCATGGATAAAAACCGTCCTAATGGTGAACATAACCTTGTGGAATGGGCACGACCATACCTAGGAGAGAAAAAGAGATTCTATCGTTTGATAGACCCCAGGCTTGAAGGTCATTTCTCAATAAAAGGTGCCCAAAAAGCAGTACAATTGGCTGCTCAATGCCTTAGCCGAGATCAAAAGGTCAGACCTTTAATGAGTGAAGTTGTTGAAGCCTTGAAGCCTCTCCCAAACCTCAAGGACATGGCAAGTTCATCTTATTATTTTCAGACAATGCAAGCTGACCGAATCCGATCTAGCCCAATGTCGAGAAATGGCTACCAAGGACCAGTTCCGAAGAACGCGCAGCAACTACGCAGCCATTCAATCGCCAATGGTTCTCATGCTTCTCCATATCATCATCAGCAACCACATCCATCTCCAAAACCCAATGTCAAAGCCTAA 1464 43.58 MEVIAEDGKVESREVSESKGKKKQKSNKEQVETVEEETGCWIALRIFGSCISSRSKVDSSISGTSINYAESKSTADTSRDQPTATPRDISSTNTSMSNAESNSSTSKLEEELKISPHLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLSDLKHPNLVKLVGYCNEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAARGLAFLHEEAKRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPDGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPYLGEKKRFYRLIDPRLEGHFSIKGAQKAVQLAAQCLSRDQKVRPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRIRSSPMSRNGYQGPVPKNAQQLRSHSIANGSHASPYHHQQPHPSPKPNVKA 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 53888687 53892940 + Hsped.10g17150.1 Hepe10g1715 582262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1715 487 SUPERFAMILY Protein kinase-like (PK-like) 109 413 IPR011009 -
Hepe10g1715 487 MobiDBLite consensus disorder prediction 70 109 - -
Hepe10g1715 487 PANTHER OS01G0588500 PROTEIN-RELATED 99 417 IPR050823 -
Hepe10g1715 487 Pfam Protein tyrosine and serine/threonine kinase 137 413 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1715 487 MobiDBLite consensus disorder prediction 440 474 - -
Hepe10g1715 487 FunFam Serine/threonine-protein kinase BIK1 100 218 - -
Hepe10g1715 487 MobiDBLite consensus disorder prediction 440 487 - -
Hepe10g1715 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1715 487 MobiDBLite consensus disorder prediction 70 105 - -
Hepe10g1715 487 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524(InterPro)
Hepe10g1715 487 SMART serkin_6 133 416 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1715 487 Gene3D Phosphorylase Kinase; domain 1 91 218 - -
Hepe10g1715 487 MobiDBLite consensus disorder prediction 1 32 - -
Hepe10g1715 487 ProSiteProfiles Protein kinase domain profile. 133 419 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1715 487 Gene3D Transferase(Phosphotransferase) domain 1 219 435 - -
Hepe10g1715 487 CDD STKc_IRAK 139 416 - -
Hepe10g1715 487 FunFam Probable serine/threonine-protein kinase PBL8 219 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0682 Hepe-Chr4:60323794 Hepe10g1715 Hepe-Chr10:53888687 3.98e-62 dispersed
Hepe07g0003 Hepe-Chr7:20325 Hepe10g1715 Hepe-Chr10:53888687 1.08e-34 dispersed
Hepe07g0847 Hepe-Chr7:10686363 Hepe10g1715 Hepe-Chr10:53888687 5.61e-35 dispersed
Hepe08g0783 Hepe-Chr8:7027305 Hepe10g1715 Hepe-Chr10:53888687 3.17e-115 dispersed
Hepe08g2697 Hepe-Chr8:68978204 Hepe10g1715 Hepe-Chr10:53888687 8.30e-136 dispersed
Hepe09g0980 Hepe-Chr9:10041604 Hepe10g1715 Hepe-Chr10:53888687 2.96e-129 dispersed
Hepe10g1128 Hepe-Chr10:44681528 Hepe10g1715 Hepe-Chr10:53888687 3.79e-110 dispersed
Hepe10g1235 Hepe-Chr10:47607786 Hepe10g1715 Hepe-Chr10:53888687 7.83e-150 dispersed
Hepe10g1850 Hepe-Chr10:55220573 Hepe10g1715 Hepe-Chr10:53888687 1.65e-81 dispersed
Hepe09g0655 Hepe-Chr9:6183554 Hepe10g1715 Hepe-Chr10:53888687 2.43e-174 transposed
Hepe10g1715 Hepe-Chr10:53888687 Hepe02g3154 Hepe-Chr2:80951236 9.46e-242 wgd
Hepe10g1715 Hepe-Chr10:53888687 Hepe07g2291 Hepe-Chr7:67246039 2.32e-136 wgd
Hepe10g1715 Hepe-Chr10:53888687 Hepe08g1588 Hepe-Chr8:22679962 5.79e-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73198 PF07714 PK_Tyr_Ser-Thr 1.60E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1715 - - - 0.0