Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1770 | ATGAGCTTCGAACCTCCGCCGGGAAGCACCGGAGGCAGGGGAAACACGTCTGTATCGGGGACGAGCAAGGAGAAGCAAAAGGAGAAAGCCAGAGTCAGTAGAACGTCACTCATATTGTGGCACGCTCACCAGAATGATTCTTCTGCTGTTCGCAAGCTTCTGGAGGAAGATCAGTCCCTTGTCCATGCTAGAGATTACGACAGCCGCACTCCTCTCCATGTTGCTTCTCTTCATGGCTGGATCGATGTTGCCAAGTGTTTGATTGAACACGGTGCGGATGTTAATGCTCAAGATCGCTGGAAGAACACTCCGCTAGCTGATGCGGAAGGAGCTAAAAAAAAAGCCATGATTGAGTTGTTAAAAACGTATGGTGGCCTTTCCTATGGCCAAAATGGAAGTCATTTTGAACCAAAGCCTGTTCCTCCTCCTCTGTCGAATAAATGTGACTGGGAAATTGATCCTTCTGAACTGGATTTTTCAAACTCAGCTATTATTGGCAAGGGGTCCTTTGGGGAAATCTTGAAGGCCTATTGGCGTGGAACCCCTGTAGCTGTCAAACGTATTCTTCCATCACTTTCAGATGATAGACTTGTGATTCAGGACTTCCGACATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATTGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCACTCATGTTAATCACTGAATACTTGAGAGGGGGTGATCTTCACCAGTATCTCAAGGACAAAGGTTCACTCAGCCCTACAACGGCCATCAATTTTGCTCTGGACATCGCCAGGGGAATGGCTTACCTCCACAATGAGCCAAATGTTATAATTCACCGAGACCTAAAACCAAGGAACGTTCTTTTAGTCAATTCTGGTGCGGACCATCTAAAAGTTGGCGATTTCGGTCTAAGCAAGCTCATCAAGGTTCAGAATTCACATGATGTTTACAAAATGACTGGCGAGACCGGGAGCTACCGGTATATGGCTCCTGAAGTTTTTAAGCACAGGAAATATGATAAGAAGGTGGATGTGTTTTCTTTTGCGATGATATTATACGAGATGCTTGAGGGAGATCCTCCACTGGCAAATTATGAGCCTTATGAAGCAGCCAAATACGTGGCTGAAGGTCATAGGCCGATGTTCCGTGGGAAAGGATACCTTCCTGTTCTAAGAGAGTTAACAGATGAATGTTGGGCAGCTGATATGAACAAAAGACCTTCTTTCTTGGAAATACTCAAAAGACTTGACAAGATCAAGGAAAATCTACCATCTGATCATCACTGGAATTTGTTTAATGCATAA | 1308 | 45.03 | MSFEPPPGSTGGRGNTSVSGTSKEKQKEKARVSRTSLILWHAHQNDSSAVRKLLEEDQSLVHARDYDSRTPLHVASLHGWIDVAKCLIEHGADVNAQDRWKNTPLADAEGAKKKAMIELLKTYGGLSYGQNGSHFEPKPVPPPLSNKCDWEIDPSELDFSNSAIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPTTAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPMFRGKGYLPVLRELTDECWAADMNKRPSFLEILKRLDKIKENLPSDHHWNLFNA | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 54466366 | 54472379 | - | Hsped.10g17700.1 | Hepe10g1770 | 582317 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1770 | 435 | Pfam | Protein tyrosine and serine/threonine kinase | 163 | 417 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe10g1770 | 435 | ProSiteProfiles | Ankyrin repeat region circular profile. | 67 | 99 | - | - | |
Hepe10g1770 | 435 | SMART | serkin_6 | 159 | 421 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g1770 | 435 | FunFam | serine/threonine-protein kinase STY8 | 12 | 133 | - | - | |
Hepe10g1770 | 435 | CDD | STKc_MAP3K-like | 165 | 417 | - | - | |
Hepe10g1770 | 435 | Gene3D | Transferase(Phosphotransferase) domain 1 | 239 | 431 | - | - | |
Hepe10g1770 | 435 | SMART | ANK_2a | 67 | 96 | IPR002110 | GO:0005515(InterPro) | |
Hepe10g1770 | 435 | ProSitePatterns | Protein kinases ATP-binding region signature. | 165 | 186 | IPR017441 | GO:0005524(InterPro) | |
Hepe10g1770 | 435 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 89 | 420 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Hepe10g1770 | 435 | Gene3D | Phosphorylase Kinase; domain 1 | 143 | 238 | - | - | |
Hepe10g1770 | 435 | ProSiteProfiles | Ankyrin repeat profile. | 67 | 99 | IPR002110 | GO:0005515(InterPro) | |
Hepe10g1770 | 435 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 278 | 290 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe10g1770 | 435 | SUPERFAMILY | Protein kinase-like (PK-like) | 157 | 429 | IPR011009 | - | |
Hepe10g1770 | 435 | ProSiteProfiles | Protein kinase domain profile. | 159 | 431 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe10g1770 | 435 | FunFam | serine/threonine-protein kinase STY46-like | 152 | 238 | - | - | |
Hepe10g1770 | 435 | FunFam | Integrin-linked protein kinase family | 238 | 433 | - | - | |
Hepe10g1770 | 435 | Gene3D | - | 12 | 132 | IPR036770 | - | |
Hepe10g1770 | 435 | PIRSF | ILK | 2 | 435 | - | - | |
Hepe10g1770 | 435 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Hepe10g1770 | 435 | SUPERFAMILY | Ankyrin repeat | 37 | 124 | IPR036770 | - | |
Hepe10g1770 | 435 | Pfam | Ankyrin repeats (3 copies) | 40 | 121 | IPR002110 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1948 | Hepe-Chr4:74362356 | Hepe10g1770 | Hepe-Chr10:54466366 | 3.44e-74 | dispersed | |
Hepe08g0608 | Hepe-Chr8:5332018 | Hepe10g1770 | Hepe-Chr10:54466366 | 3.19e-80 | dispersed | |
Hepe10g1770 | Hepe-Chr10:54466366 | Hepe02g1445 | Hepe-Chr2:18464451 | 1.46e-30 | dispersed | |
Hepe10g1770 | Hepe-Chr10:54466366 | Hepe09g0241 | Hepe-Chr9:2088187 | 2.29e-40 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73199 | PF07714 | PK_Tyr_Ser-Thr | 1.90E-63 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1770 | - | - | - | 0.0 |