Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1770 ATGAGCTTCGAACCTCCGCCGGGAAGCACCGGAGGCAGGGGAAACACGTCTGTATCGGGGACGAGCAAGGAGAAGCAAAAGGAGAAAGCCAGAGTCAGTAGAACGTCACTCATATTGTGGCACGCTCACCAGAATGATTCTTCTGCTGTTCGCAAGCTTCTGGAGGAAGATCAGTCCCTTGTCCATGCTAGAGATTACGACAGCCGCACTCCTCTCCATGTTGCTTCTCTTCATGGCTGGATCGATGTTGCCAAGTGTTTGATTGAACACGGTGCGGATGTTAATGCTCAAGATCGCTGGAAGAACACTCCGCTAGCTGATGCGGAAGGAGCTAAAAAAAAAGCCATGATTGAGTTGTTAAAAACGTATGGTGGCCTTTCCTATGGCCAAAATGGAAGTCATTTTGAACCAAAGCCTGTTCCTCCTCCTCTGTCGAATAAATGTGACTGGGAAATTGATCCTTCTGAACTGGATTTTTCAAACTCAGCTATTATTGGCAAGGGGTCCTTTGGGGAAATCTTGAAGGCCTATTGGCGTGGAACCCCTGTAGCTGTCAAACGTATTCTTCCATCACTTTCAGATGATAGACTTGTGATTCAGGACTTCCGACATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATTGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCACTCATGTTAATCACTGAATACTTGAGAGGGGGTGATCTTCACCAGTATCTCAAGGACAAAGGTTCACTCAGCCCTACAACGGCCATCAATTTTGCTCTGGACATCGCCAGGGGAATGGCTTACCTCCACAATGAGCCAAATGTTATAATTCACCGAGACCTAAAACCAAGGAACGTTCTTTTAGTCAATTCTGGTGCGGACCATCTAAAAGTTGGCGATTTCGGTCTAAGCAAGCTCATCAAGGTTCAGAATTCACATGATGTTTACAAAATGACTGGCGAGACCGGGAGCTACCGGTATATGGCTCCTGAAGTTTTTAAGCACAGGAAATATGATAAGAAGGTGGATGTGTTTTCTTTTGCGATGATATTATACGAGATGCTTGAGGGAGATCCTCCACTGGCAAATTATGAGCCTTATGAAGCAGCCAAATACGTGGCTGAAGGTCATAGGCCGATGTTCCGTGGGAAAGGATACCTTCCTGTTCTAAGAGAGTTAACAGATGAATGTTGGGCAGCTGATATGAACAAAAGACCTTCTTTCTTGGAAATACTCAAAAGACTTGACAAGATCAAGGAAAATCTACCATCTGATCATCACTGGAATTTGTTTAATGCATAA 1308 45.03 MSFEPPPGSTGGRGNTSVSGTSKEKQKEKARVSRTSLILWHAHQNDSSAVRKLLEEDQSLVHARDYDSRTPLHVASLHGWIDVAKCLIEHGADVNAQDRWKNTPLADAEGAKKKAMIELLKTYGGLSYGQNGSHFEPKPVPPPLSNKCDWEIDPSELDFSNSAIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPTTAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPMFRGKGYLPVLRELTDECWAADMNKRPSFLEILKRLDKIKENLPSDHHWNLFNA 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 54466366 54472379 - Hsped.10g17700.1 Hepe10g1770 582317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1770 435 Pfam Protein tyrosine and serine/threonine kinase 163 417 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1770 435 ProSiteProfiles Ankyrin repeat region circular profile. 67 99 - -
Hepe10g1770 435 SMART serkin_6 159 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1770 435 FunFam serine/threonine-protein kinase STY8 12 133 - -
Hepe10g1770 435 CDD STKc_MAP3K-like 165 417 - -
Hepe10g1770 435 Gene3D Transferase(Phosphotransferase) domain 1 239 431 - -
Hepe10g1770 435 SMART ANK_2a 67 96 IPR002110 GO:0005515(InterPro)
Hepe10g1770 435 ProSitePatterns Protein kinases ATP-binding region signature. 165 186 IPR017441 GO:0005524(InterPro)
Hepe10g1770 435 PANTHER SERINE-THREONINE PROTEIN KINASE 89 420 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe10g1770 435 Gene3D Phosphorylase Kinase; domain 1 143 238 - -
Hepe10g1770 435 ProSiteProfiles Ankyrin repeat profile. 67 99 IPR002110 GO:0005515(InterPro)
Hepe10g1770 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1770 435 SUPERFAMILY Protein kinase-like (PK-like) 157 429 IPR011009 -
Hepe10g1770 435 ProSiteProfiles Protein kinase domain profile. 159 431 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1770 435 FunFam serine/threonine-protein kinase STY46-like 152 238 - -
Hepe10g1770 435 FunFam Integrin-linked protein kinase family 238 433 - -
Hepe10g1770 435 Gene3D - 12 132 IPR036770 -
Hepe10g1770 435 PIRSF ILK 2 435 - -
Hepe10g1770 435 MobiDBLite consensus disorder prediction 1 30 - -
Hepe10g1770 435 SUPERFAMILY Ankyrin repeat 37 124 IPR036770 -
Hepe10g1770 435 Pfam Ankyrin repeats (3 copies) 40 121 IPR002110 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1948 Hepe-Chr4:74362356 Hepe10g1770 Hepe-Chr10:54466366 3.44e-74 dispersed
Hepe08g0608 Hepe-Chr8:5332018 Hepe10g1770 Hepe-Chr10:54466366 3.19e-80 dispersed
Hepe10g1770 Hepe-Chr10:54466366 Hepe02g1445 Hepe-Chr2:18464451 1.46e-30 dispersed
Hepe10g1770 Hepe-Chr10:54466366 Hepe09g0241 Hepe-Chr9:2088187 2.29e-40 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73199 PF07714 PK_Tyr_Ser-Thr 1.90E-63 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1770 - - - 0.0