Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1775 ATGGGTGACGATGATGAAGAATTGCCACCGTCGTCATCACCGCCGCCGCCGTCCAAACCTAAGCCCCTTCCGTTCAGGCCCACTATTAATCTGCCGCCACGGACCTCTATGGAGTCACTCTTCAGCGGTGGGCCGGGTTTGGGTTTCGGGTTTAGCCCAGGGCCCATGACCCTCGTCTCCAGCTTCTTCTCCGATTCCGACGACTGCAAGTCTTTTTCTCAGCTCCTAGCCGGAGCCATGGCGTCTCCTGTGGCGTCTGAGCTCAAGATCCCTCCCGCTCTCGGTCTGCTCGATTCTCCAGGTCCCTTCTCCCTCGGTCAGGGACCTTTAGGAATGACACATCAGCAGGCTTTGGCTCAGGTTACTATGCAGGCTGCAGAAGCCTATTCTCATAAGCAAATGCAAGCAGAATCTTTTTCTTCATCAGTAGCACCCTCTGTATTCTCCTCAGAGCTTTTGACAACCTTTCCGGGCGAGAAGACTAAAGATCAGCCGATGCAACCTCCATTGCCGAACTCTGCAGTTGCGTCCAAGGAGTCGTTGGATATCTCTCAATCAGATCAGAGATTGCAATCTTCTTCGTGTAATGTTGATAGGCCGGCTGGTGATGGCTACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGCAGCGAATTTCCTCGAAGCTACTACAAGTGCACGCACCCGAATTGTCCTGTTAAGAAAAAGGTTGAACGATCTCTGGAAGGCCAAGTCACTGAAATTATCTACAAGGGCGAGCACAACCACGATCGACCTCAACCGAACAAGCGGGCAAAGGATGTCGGGAATTCTAACAGATATTCAAGCATTCATGGCAATCCGGAGCTATCTTCTCAAGTTCAGAGTGGATATTTGAATAAATTGAATGAGCAGACAGCTGTGTCTTCCATTGCAAAGAAGGATCAAGAATCGAGTCATGTTACACATGAACAGTTGTCGGGTACCAGTGATGGTGAGGGAGGGAGTGAGATAGAAACTGGAGGGAATCGAAAATATGAAGACGAACCTGATGCCAAGCGACGGAATACTGAGGTTAGAATTTCTGAGCCACCCTCTTCTCATAGGACGCTCACAGAATCCCGAATCATTGTGCAGACTACAAGTGAAGTTGATCTATTGGATGATGGCTACAGGTGGCGAAAGTACGGGCAGAAAATTGTTAAAGGCAACCCTTACCCCAGGAGCTATTATAAATGCACGACTCCAGGATGCAATGTTCGTAAACATGTTGAGAGAGCTTCAACAGATGCGAAAGCTGTCATAACGACGTATGAGGGTAAACACAATCATGATATTCCAGCTGGTAAAATCAGCAGCCACGGTACAGTCAACAGTAACGTTCCTCAGCTAAAATCACAGAATATAGTTACTGAGAATTTTTTTTCAAGTAACAACACTGATCCTGGGAACTCTCGTCGACAGCCTGCTGGACTTCTACGGTTAAAGGAAGAACAAATAACATAG 1488 47.85 MGDDDEELPPSSSPPPPSKPKPLPFRPTINLPPRTSMESLFSGGPGLGFGFSPGPMTLVSSFFSDSDDCKSFSQLLAGAMASPVASELKIPPALGLLDSPGPFSLGQGPLGMTHQQALAQVTMQAAEAYSHKQMQAESFSSSVAPSVFSSELLTTFPGEKTKDQPMQPPLPNSAVASKESLDISQSDQRLQSSSCNVDRPAGDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGQVTEIIYKGEHNHDRPQPNKRAKDVGNSNRYSSIHGNPELSSQVQSGYLNKLNEQTAVSSIAKKDQESSHVTHEQLSGTSDGEGGSEIETGGNRKYEDEPDAKRRNTEVRISEPPSSHRTLTESRIIVQTTSEVDLLDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASTDAKAVITTYEGKHNHDIPAGKISSHGTVNSNVPQLKSQNIVTENFFSSNNTDPGNSRRQPAGLLRLKEEQIT 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 54519892 54523401 - Hsped.10g17750.1 Hepe10g1775 582322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1775 495 MobiDBLite consensus disorder prediction 9 29 - -
Hepe10g1775 495 MobiDBLite consensus disorder prediction 250 265 - -
Hepe10g1775 495 MobiDBLite consensus disorder prediction 316 330 - -
Hepe10g1775 495 MobiDBLite consensus disorder prediction 1 39 - -
Hepe10g1775 495 ProSiteProfiles WRKY domain profile. 376 441 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 MobiDBLite consensus disorder prediction 157 210 - -
Hepe10g1775 495 Gene3D WRKY domain 366 442 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 Gene3D WRKY domain 186 261 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 FunFam WRKY transcription factor 188 261 - -
Hepe10g1775 495 MobiDBLite consensus disorder prediction 332 356 - -
Hepe10g1775 495 SUPERFAMILY WRKY DNA-binding domain 200 260 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 Pfam WRKY DNA -binding domain 382 439 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 Pfam WRKY DNA -binding domain 203 258 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 SMART WRKY_cls 201 259 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 SMART WRKY_cls 381 440 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 FunFam WRKY transcription factor 33 368 434 - -
Hepe10g1775 495 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 459 IPR044810 GO:0003700(InterPro)
Hepe10g1775 495 SUPERFAMILY WRKY DNA-binding domain 373 441 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 ProSiteProfiles WRKY domain profile. 203 260 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe10g1775 495 MobiDBLite consensus disorder prediction 249 365 - -
Hepe10g1775 495 MobiDBLite consensus disorder prediction 157 199 - -
Hepe10g1775 495 MobiDBLite consensus disorder prediction 266 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe05g0226 Hepe-Chr5:2673098 Hepe10g1775 Hepe-Chr10:54519892 1.25e-62 dispersed
Hepe06g1242 Hepe-Chr6:62187790 Hepe10g1775 Hepe-Chr10:54519892 2.66e-80 dispersed
Hepe07g2287 Hepe-Chr7:67198609 Hepe10g1775 Hepe-Chr10:54519892 1.07e-19 dispersed
Hepe08g0694 Hepe-Chr8:6248899 Hepe10g1775 Hepe-Chr10:54519892 3.62e-70 dispersed
Hepe09g0437 Hepe-Chr9:3944685 Hepe10g1775 Hepe-Chr10:54519892 5.51e-18 dispersed
Hepe09g0577 Hepe-Chr9:5380043 Hepe10g1775 Hepe-Chr10:54519892 1.58e-44 dispersed
Hepe09g1283 Hepe-Chr9:17678289 Hepe10g1775 Hepe-Chr10:54519892 1.93e-73 dispersed
Hepe10g0780 Hepe-Chr10:14879773 Hepe10g1775 Hepe-Chr10:54519892 4.02e-23 dispersed
Hepe10g0789 Hepe-Chr10:15256032 Hepe10g1775 Hepe-Chr10:54519892 2.56e-23 dispersed
Hepe10g1368 Hepe-Chr10:49997133 Hepe10g1775 Hepe-Chr10:54519892 1.17e-50 dispersed
Hepe10g1775 Hepe-Chr10:54519892 HepeContig66g0141 Hepe-ChrContig66:11735812 1.62e-26 dispersed
Hepe10g1775 Hepe-Chr10:54519892 Hepe02g3191 Hepe-Chr2:81462853 1.82e-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56555 PF03106 WRKY 3.50E-25 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1775 - - - 0.0