Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1783 ATGGCAAAAATGGCTTCCAAAGCTCTGCTTCTGATGTGCTTGTTTTCATTGTCATGTTCGATTTTAGCAGAATTTGTCACAGTTTCAGTGAAAGGAGTGACCACCATTGCTGAAACTGACAATGATTTCATCTGTGCTACTTTGGATTGGTGGCCTCCTACTAAATGCGATTATGATCAATGTCCATGGGGAAAGTCTGGCCTTATGAATTTGGATCTGCAGAATGTGATATTGTTTAAGGCAATCAAGGAGTTCAATCCTCTGAGAATTCGAGTTGGTGGGTCACTTCAAGATCAAATCATCTACAGAGTTGGAAGCTTAATGAAGAAATGTCCTAAAATGAAGAAACAAGATGATGGTTTGTTTGGATTCAGCAAAGGTTGTTTCCCCATGAAAAGATGGGATGATGTTAGCGATCTCTTCAACAAAACATCAGCTCGGATTACGTTTGGTTTGAATGCTCTGATGGGTAAAAAACCAGCCAAGGATGGAAGTATCAATTGGATTGGTGATTGGGATCCTCGTAATGCTCGAGATTTCCTAAGATACACTGCTGCTAAAGGATACAAAATTGATTCTTATGAACTGGGTAATGAGCTTTGTGCTGGTGGAGTTTCAGCAAGGATTGAGCCAGTTCAATATGCCAAAGATTTGACTCTAATGAGAAAAGTTGTTGAAGAAGTTTATCCTGATGCCAACAACAGACCCAAAATTCTAGGCCCAGCTGGTTTCTTTGACAAAGAATGGTTCAAAACGTTCCTTCAAAACACTGGCCCAAATGTTGTTGATGGAGTCACCCACCATATTTACAATCTTGGTGCAGGTGTTGATCCTGAGCTTATAAACAGGATTAAAGACCCTTATTATTTGGACGAAATTGCTGAGACTTTCAAGGAAGCTGCGGCGGTTTGTGGGAGCTTTGCGCCGTGGTCTAAGCCGTGGGTTGGTGAATCTGGTGGCGCTTATAACAGTGGTGGCAGAACTGTTTCTCACACCTTTGCTGATGGATTCTGGTATTTGGATCAATTGGGCATGACGGCTACATACAACCATCAAGTTTACTGCAGACAAGCCTTGATTGGTGGAAATTATGCTCTGCTTAATACTACTACTTTCATTCCAAACCCAGATTACTATAGCGCACTTCTATGGCACAGATTAATGGGAACAAAGGTGCTATCAGTCTCCCACGACAGCTCTCCATATCTTCGTGTCTATTCTCACTGCACCAAAAACAATAGAGGCGTGACAGTTCTTCTAATCAACATGTCGAATTCGACAACTTTTGATGTCAACATTGAGAACGACAGAAAGCTTTATCCCAACTATTTCACCGGCGGCGACAGATTAGAGCCAAGAGAAGAGTACCATCTGACTCCTAAAGACGGCGATATTCAAAGCGACGTTATGCTTTTGAACGGAGTTCCTCTGCAACTTACACCAAAATTGGACATTCCCGACATGTCGCCCAACCTCGTCGCTCCCTCTTCCGCTGTGTCGGTTGCTCCTTATTCTTTTGTCTTCGTCTCCATTAAAGACTTCAAAGCTTCTGCCTGCGCCTAG 1563 42.67 MAKMASKALLLMCLFSLSCSILAEFVTVSVKGVTTIAETDNDFICATLDWWPPTKCDYDQCPWGKSGLMNLDLQNVILFKAIKEFNPLRIRVGGSLQDQIIYRVGSLMKKCPKMKKQDDGLFGFSKGCFPMKRWDDVSDLFNKTSARITFGLNALMGKKPAKDGSINWIGDWDPRNARDFLRYTAAKGYKIDSYELGNELCAGGVSARIEPVQYAKDLTLMRKVVEEVYPDANNRPKILGPAGFFDKEWFKTFLQNTGPNVVDGVTHHIYNLGAGVDPELINRIKDPYYLDEIAETFKEAAAVCGSFAPWSKPWVGESGGAYNSGGRTVSHTFADGFWYLDQLGMTATYNHQVYCRQALIGGNYALLNTTTFIPNPDYYSALLWHRLMGTKVLSVSHDSSPYLRVYSHCTKNNRGVTVLLINMSNSTTFDVNIENDRKLYPNYFTGGDRLEPREEYHLTPKDGDIQSDVMLLNGVPLQLTPKLDIPDMSPNLVAPSSAVSVAPYSFVFVSIKDFKASACA 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 54589510 54593147 - Hsped.10g17830.1 Hepe10g1783 582330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1783 520 Gene3D Glycosidases 65 386 - -
Hepe10g1783 520 SUPERFAMILY (Trans)glycosidases 39 388 IPR017853 -
Hepe10g1783 520 FunFam heparanase-like protein 3 63 386 - -
Hepe10g1783 520 Pfam Glycosyl hydrolase family 79, N-terminal domain 26 344 IPR005199 GO:0016020(InterPro)|GO:0016798(InterPro)
Hepe10g1783 520 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Hepe10g1783 520 PANTHER HEPARANASE-RELATED 26 520 - GO:0004566(PANTHER)|GO:0009505(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g2494 Hepe-Chr8:66213664 Hepe10g1783 Hepe-Chr10:54589510 1.32e-134 dispersed
Hepe10g1783 Hepe-Chr10:54589510 Hepe07g2481 Hepe-Chr7:69121408 1.16e-166 wgd
Hepe10g1783 Hepe-Chr10:54589510 Hepe09g0254 Hepe-Chr9:2194749 6.52e-193 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1783 K07964 - csv:101214214 848.58