Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1789 ATGCTTTATGCTCTGCTTCGAGATTTAAACCGAAGGCGCTTCCCATTTAGAGTGGTTCTGAACTGGATTATTAACGGGACTTCAGAAATATTGGACATGAGAAGCTCCTGGGTCAATAAAATATCTGTAATCTTAGGCTCCAAACCACCATTCAGCTGGTTAATTTTGTGCCTCATCAGTGTGCTTGCGTTAATCGTAGTGCTAGGAACGTCTTCTTCAAATGCCTTTGATTCAGTTACTACCACGCCAGTGTCTGACATTTATACTAGTTATAGAAGGCAAAAGGAAAGGGCCGCAATTGATATGTTCGACTTAAAGTCTCTTTCATTAGCCACTACTCGCCTCAAAGAGTTTGGGCTTTGTGGAAAAGAAAGAGAAAATCATGTGCCATGTTACAATGTTACAGCAAACATGTTAGCTGGATACAAAGAAGGGGAGGAGTATGATAGGCACTGTGAAGTGTCTAGAACAGGAGAGCGGTGCCTGGTTCGTCCTCCTAAAGACTACAAAATCCCTATGAGTTGGCCTGTTGGTAGGGATATAATATGGAGTGGAAATGTGAAGGTAACAAGAGATCAACTTCTGTCCTCTGGGAGCCCTACCAAAAGGTTGATGTTATTAGAAGAGAACCAAATTGCTTTCCACTCGGAAGATGGAGATGGAGTCAAAGAGTATTCTTTTCAAATTGCAGACATGATTGGTTTAGGCAGTGACTCTGAATTTCCTCAAGCTGGTGTACGCTCGATACTTGATATTGGTTGTGGGTTTGGTAGCTTTGGTGCTCATGTAATATCAATGAATGTAATGGTTATGTGCATTGCAACCTATGAGGCGACTGGCAGCCAAGTTCAAATGGCTCTTGAGAGAGGCCTTCCAGCGATGCTTGGAAACTTTAATACAAAACAGCTTCCATACCCATCCTTGTCATTTGACATGGTTCACTGTGCACAGTGTGATATCTCTTGGAACGACAAAGGTGGGATATTCCTTATTGAAGCTGACCGGTTACTAAGACCTGGAGGTTATTTTGTTTTAACCTCTCCCACAGACAAGCCAGTTGGAGGTTCACTGTCTTCCAAGAAGATAAATATTTTGACACCATTGGAAGAGATGACCCGAAGATTATGTTGGAGTCTTTTGGCTCAGCAGTATGAAACTTATATTTGGCAGAAAACTACAGATCCTCATTGCTATTTATCTCGCGAGCAGGAAGTTGTACCACTTTGTAAAGAAGGGCATGATACTCCATATTATCAACCTCTGGTACCATGCTTAAGTAGTACTACCAGCAAGCGGTGGATTCCAATCCAGAACAGGTCTTCTGGTTTCCATTTGAGTTCAGCTGAACTTGAAGTTCATGGAAAGTATTCTTCCATAATGGTTCTATGTGTTCAATCAGAAGACTACTCTGATGACTTACAAATTTGGCGAACCGCTTTGAAAAACTATTGGTCCTTACTTACGCCTTTAATTTTCTCTGACCATCCAAAGAGGCCCGGTGATGAAGATCCATTACCTCCATTTAACATGATACGCAATGTGATGGACATGAATGCCCACTATGGGGGTTTAAATGCTGCGTTTGTGGAGGAGAAGAAAACAGTTTGGGTCATGAACGTTGTGCCTGTTGGGTCTCCCAATACGCTTCCGCTCATACTTGATCAAGGTTTTGCTGGTGTTCTGCATGATTGGTGTGAACCTTTCCCCACTTATCCACGAACATATGATTTCCTCCATGCAAATGGACTTCTCTCACAGCTACTTTCAAGTAGGTGCAGCATGATTGGATTATTAGTGGAGATGGATCGTATACTGCGCCCTGAGGGATGGGTCGTCCTAAATGACAAAATGGGACTGATAGAGAAGGCACGAATGCTTGCTGCACAGATTCGTTGGGAGGCAAGGGTGATAGACTTTCAGAATGGCAGTGACCAGCGGCTCCTTGTTTGCCAGAAACCGTTCGTGAAAAAATGA 1974 42.96 MLYALLRDLNRRRFPFRVVLNWIINGTSEILDMRSSWVNKISVILGSKPPFSWLILCLISVLALIVVLGTSSSNAFDSVTTTPVSDIYTSYRRQKERAAIDMFDLKSLSLATTRLKEFGLCGKERENHVPCYNVTANMLAGYKEGEEYDRHCEVSRTGERCLVRPPKDYKIPMSWPVGRDIIWSGNVKVTRDQLLSSGSPTKRLMLLEENQIAFHSEDGDGVKEYSFQIADMIGLGSDSEFPQAGVRSILDIGCGFGSFGAHVISMNVMVMCIATYEATGSQVQMALERGLPAMLGNFNTKQLPYPSLSFDMVHCAQCDISWNDKGGIFLIEADRLLRPGGYFVLTSPTDKPVGGSLSSKKINILTPLEEMTRRLCWSLLAQQYETYIWQKTTDPHCYLSREQEVVPLCKEGHDTPYYQPLVPCLSSTTSKRWIPIQNRSSGFHLSSAELEVHGKYSSIMVLCVQSEDYSDDLQIWRTALKNYWSLLTPLIFSDHPKRPGDEDPLPPFNMIRNVMDMNAHYGGLNAAFVEEKKTVWVMNVVPVGSPNTLPLILDQGFAGVLHDWCEPFPTYPRTYDFLHANGLLSQLLSSRCSMIGLLVEMDRILRPEGWVVLNDKMGLIEKARMLAAQIRWEARVIDFQNGSDQRLLVCQKPFVKK 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 54643940 54647684 + Hsped.10g17890.1 Hepe10g1789 582336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1789 657 Gene3D Vaccinia Virus protein VP39 235 413 IPR029063 -
Hepe10g1789 657 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 127 652 IPR004159 GO:0008168(InterPro)
Hepe10g1789 657 CDD AdoMet_MTases 249 346 - -
Hepe10g1789 657 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 245 351 IPR029063 -
Hepe10g1789 657 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 57 654 IPR004159 GO:0005737(PANTHER)|GO:0008168(InterPro)
Hepe10g1789 657 FunFam probable pectin methyltransferase QUA2 210 392 - -
Hepe10g1789 657 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 475 637 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g0492 Hepe-Chr10:5705533 Hepe10g1789 Hepe-Chr10:54643940 5.83e-224 dispersed
Hepe10g1789 Hepe-Chr10:54643940 Hepe01g2131 Hepe-Chr1:85929848 1.98e-233 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1789 K23870 - csv:101213009 1241.48