Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1790 ATGTCGTCCGCCGAGAAGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTCGCCGAACAGGCCGAACGCTACGACGAAATGGTGGAGTGTATGAAGAAAATTGCTAAATTAGATGTTGAGTTAACCGTGGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATTGGTGCTAGACGAGCTTCTTGGAGGATCATGTCCTCAATTGAACAGAAAGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTCATTAAGGGTTACCGTCAGAGTGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTTACTATTATTGACAAGCATCTCATCCCTTCTTCAACCTCTTCAGAAGCATCGGTTTTCTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGATAGGAAGGAGGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCTTCGACCACCGCAAATACCGAACTCCCGTCAACCCACCCGATCCGTCTTGGCCTTGCTCTTAACTTTTCTGTCTTTTACTACGAGATTATGAATTCTCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAAGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAATCTCACTCTCTGGACATCTGATTTACCAGAGGATGGAGGTGAAGAGAACATCAAAGGTGAGGAATCCAAACCGGCAGCGGCGGCGGCGGCAGCAGCACCAGCAGCAGCACCAGCTCCCGAGCAGCAGCCGCAGCATTAA 831 46.21 MSSAEKERETQVYMAKLAEQAERYDEMVECMKKIAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKGYRQSVEEELSKICTDILTIIDKHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYETASTTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENIKGEESKPAAAAAAAAPAAAPAPEQQPQH 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 54650954 54654047 + Hsped.10g17900.1 Hepe10g1790 582337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1790 276 Pfam 14-3-3 protein 14 236 IPR023410 -
Hepe10g1790 276 MobiDBLite consensus disorder prediction 237 276 - -
Hepe10g1790 276 SMART 1433_4 8 250 IPR023410 -
Hepe10g1790 276 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Hepe10g1790 276 PIRSF 2014/3/3 2 248 IPR000308 -
Hepe10g1790 276 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Hepe10g1790 276 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Hepe10g1790 276 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Hepe10g1790 276 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Hepe10g1790 276 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Hepe10g1790 276 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Hepe10g1790 276 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Hepe10g1790 276 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Hepe10g1790 276 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Hepe10g1790 276 FunFam 14-3-3 protein epsilon 3 250 - -
Hepe10g1790 276 Gene3D - 1 249 IPR036815 -
Hepe10g1790 276 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0098 Hepe-Chr2:1171079 Hepe10g1790 Hepe-Chr10:54650954 5.00e-128 dispersed
Hepe10g0481 Hepe-Chr10:5581578 Hepe10g1790 Hepe-Chr10:54650954 1.65e-116 dispersed
Hepe10g0497 Hepe-Chr10:5752248 Hepe10g1790 Hepe-Chr10:54650954 5.62e-130 dispersed
Hepe10g0578 Hepe-Chr10:6924359 Hepe10g1790 Hepe-Chr10:54650954 2.68e-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1790 K06630 - csv:101221275 466.077