Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1818 ATGGCTCTTAAATCACTGCTAAAACCCAAATCCTCCATTAGAAAATTCTTAATTTCTTCCTCCATATCGTCCTCTTCGCAATTCTCCTCCCTCTGCAAGCAACGTATCTTCTCACTGCCTTCCGAATCCCCACCGGCTGCTAAAAAAGTTCCTTTCACGTACTCAGTTCATGGCGTTACGCTGCAAGATCCCCACCACTGGATGTCCAACACCGACGACCCTGATCTCGCCGACTACCTCCGTCGAGAAAACTTGTACGCTGAGGCTTTCATGGCCGACACTCAGATTCTGCAGCGGCGGCTCTTCTCCGAGATGACGAGTCGAATTCCCGCCAAGGTTTCCACTCCTCCTGAGCCTTGGGGACCCTGGTTTTACTACCAATACATTCCGGAAGGGAAGGAATACCCAGTTCTATGTCGTAGGTTACAGAATGAGAAAAGCGGTTGGTTGAAGAAACTTGTACAATTTGCCAAAGGAAATTTTGGGATGGAGGAAGTAGTTTTACTTGATTGGAATGAAATTGCTAAACAATATGGCTATGTTCACGTGGGAACTTGTCGTGTTTCACCAGACCACAACTTTCTAGCATATACAGTTGATATTACTGGCAGTGAACACTTCATGCTTCAGATTAAAGACCTGAGAACTGGACTTATAATTCCTAAGTTACAGGAGGGAGTTGTAAGTTTGGCTTGGGCAGAAGAAGGAAGGATGCTTTTCTATACACAAGCAGATGAGAATCAGCGACCTTACAGGCAAGTTTCTGGCATCGTTCTTAGCCTTCTTTTAAGAATTGATGTCTTGGTGTTCGTTGAAAATGACCCCAACTATTGTGTAGACATAACAAGCACAAAAGATGGGAAGTTCCTAACTTTAGACTTCTATTCTGAAACTCCACTGGTTTGTTTAACCCAGGTTTATATTATTGATGCTAACAAGACATCAAGTGGTTTGCAAAGAATACACAAACGCATTCCTGGTATTCAATACTTTCTGGAACATCATCGTGGTTTCTTTTATATCCTAACAAATGCTCCACTAGAAAAGAATGGGGATTGTTCGAAGGAAGATTATTATGTAGCTCGATGTCGAGTTGAAGATATTAAGTCGGCAGATTGGCAGGATATCATCCTTCAGATTGAAGATTTCACGATACAGGACATGGACATTTTTAGTGGACATCTTGTGCTTTTTGTCAGTAAGAATGGTGTTCCGATGTTATGTTCAATCAATTTGCCTTTAGATGCTAATCATAAGCATCGCTTGGAGATCAAGAAACTTGACCCATGGTTTTTCCCTCTTCCCTCAAATTCCTGCAGCGTAGCTCCAGGCTCAAACCATGACTTCATGAGTTCATTATACCGTGTGGTGCTTTCATCTCCAGTGATGCCAGATTTGATTATTGACTATGACATGTCTAAACGGGTCTTCTCAATCATTCAGCAAGAGGAAGTACAAGTTAAGCATGATGTTAAACCTAAAACATATCTACCGGATGAGTTAGATACTGAAGAAGTTTCAGATGCACAAAACAAAAGAGAAAACTTCCAGGGTAGTGAATCCCAAATTTGGAAGGACTTTTCTGATGCATACTGTTGTGAGAGGAAGGAAGTTATATCACACGACGGCATCAGAGTACCCTTGACCATATTGTATTCTCCCATGACTTTTCAGAAAGGACAGTCACCCGGAGTTCTACAAGGGTATGGAGCATATGGTGAAATCCTAGATAAAAGTTGGTGTCCTTATCGCCTGAGTTTACTTGATCGTGGTTTTGTGCTGGCATTTGCAGACGTCAGGGGAGGAGGTGGTGGTGATGGTGATTCTTCATGGCATAGATGTGGGAGTGGGCTTGAGAAACAAAATTCAATGCACGACTTTATCTCTTGTTCGAATTTCCTCATTGATAATGGCTATGTTCATAAGAATCGGCTTGGTTCCATTGGATACAGTGCAGGAGGTCTTCTTGTTGGGGCTGCTATCAACATGCATCCCGATCTGTTTCGAGCGGCCATTTTGAAGGTTCCATTTCTTGACATATGTAACACGCTACTTGATCCCAGTTTACCTCTCACCATTCTGGATTATGAAGAATTTGGAAATCCACAGATACCAATGCAGTTCGAATCTATTTTGAGCTATTCTCCTTACGATAACATATCTAAGGGAAGTTGTTATCCTCCAATGCTCGTCACAGCATCATTCCGTGATGCGAGGGTTGGAGTATGGGAAGCTGCCAAATGGGTGGCAAAAATACGAGACACTACATGCTCTCATTGTTCAACTTCTGCAATTTTAAAGACCAATATGCTTGGAGGACATTTTGGTGAAGGTGGTCTCTATGGTGGATGTGAAGAGACAGCTTACGAGTACGCTTTTCTCATCAAAGTCCTTGGAACTTCTGACCGCGATTAA 2415 42.53 MALKSLLKPKSSIRKFLISSSISSSSQFSSLCKQRIFSLPSESPPAAKKVPFTYSVHGVTLQDPHHWMSNTDDPDLADYLRRENLYAEAFMADTQILQRRLFSEMTSRIPAKVSTPPEPWGPWFYYQYIPEGKEYPVLCRRLQNEKSGWLKKLVQFAKGNFGMEEVVLLDWNEIAKQYGYVHVGTCRVSPDHNFLAYTVDITGSEHFMLQIKDLRTGLIIPKLQEGVVSLAWAEEGRMLFYTQADENQRPYRQVSGIVLSLLLRIDVLVFVENDPNYCVDITSTKDGKFLTLDFYSETPLVCLTQVYIIDANKTSSGLQRIHKRIPGIQYFLEHHRGFFYILTNAPLEKNGDCSKEDYYVARCRVEDIKSADWQDIILQIEDFTIQDMDIFSGHLVLFVSKNGVPMLCSINLPLDANHKHRLEIKKLDPWFFPLPSNSCSVAPGSNHDFMSSLYRVVLSSPVMPDLIIDYDMSKRVFSIIQQEEVQVKHDVKPKTYLPDELDTEEVSDAQNKRENFQGSESQIWKDFSDAYCCERKEVISHDGIRVPLTILYSPMTFQKGQSPGVLQGYGAYGEILDKSWCPYRLSLLDRGFVLAFADVRGGGGGDGDSSWHRCGSGLEKQNSMHDFISCSNFLIDNGYVHKNRLGSIGYSAGGLLVGAAINMHPDLFRAAILKVPFLDICNTLLDPSLPLTILDYEEFGNPQIPMQFESILSYSPYDNISKGSCYPPMLVTASFRDARVGVWEAAKWVAKIRDTTCSHCSTSAILKTNMLGGHFGEGGLYGGCEETAYEYAFLIKVLGTSDRD 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 54952807 54957174 + Hsped.10g18180.1 Hepe10g1818 582365

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1818 804 SUPERFAMILY alpha/beta-Hydrolases 533 755 IPR029058 -
Hepe10g1818 804 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 619 638 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe10g1818 804 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 707 722 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe10g1818 804 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 726 748 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe10g1818 804 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 563 581 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe10g1818 804 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 649 669 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe10g1818 804 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 591 615 IPR002470 GO:0004252(InterPro)|GO:0006508(InterPro)
Hepe10g1818 804 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 44 479 IPR023302 GO:0004252(InterPro)
Hepe10g1818 804 SUPERFAMILY Peptidase/esterase 'gauge' domain 40 489 - -
Hepe10g1818 804 Gene3D alpha/beta hydrolase 63 796 IPR029058 -
Hepe10g1818 804 Gene3D - 112 484 - -
Hepe10g1818 804 Pfam Prolyl oligopeptidase family 584 800 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Hepe10g1818 804 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 25 799 IPR051543 GO:0009507(PANTHER)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1818 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0917 Hepe-Chr1:73456764 Hepe10g1818 Hepe-Chr10:54952807 2.43e-96 dispersed
Hepe08g2454 Hepe-Chr8:65521975 Hepe10g1818 Hepe-Chr10:54952807 1.17e-159 dispersed
Hepe10g1037 Hepe-Chr10:41134843 Hepe10g1818 Hepe-Chr10:54952807 5.59e-27 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g945 . . . . Bpe13g01395 . . . Cmo04g01650 . . . Car04g01628 . Sed08g1575 . Cpe01g01400 Bhi07g01449 Tan04g0961 Cmetu10g1342 Lac13g0407 Hepe10g1818 . . . . . . . . . Cone13ag0930 Cone19ag0923 Cone6ag0559 Cone9ag0566 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007009 2 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 37