Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1832 ATGATGGATATTGGTGATAGAGATAAATTTAGACTAGAAACTAGGACAGAGGATTGTATTAACTATTCACATGGCATGTCTTCGGATTGGCGATTTGGCGAGACGACGCTCACGAGTATGCCGATGGGTTTGGTTTTGCCGGGGAATGTGGATGTAGTTAGGAATCAGGATATGGTTGGTTGTTGTTCTTCCACTGCTCCTATGGTAGAGTCATTTAGCTCTAGTATGTGGGAACAAGCAGCTAATTGTCAAAACTTGGGAATTTGCAACATTCAAGATCTTAACAACTGTACTACTTCAAATACCATAGCAATTAACAAGGCCAGTGGCTGTCCAGTTTCTTTGAGTAGTGACATTGATAGAACACTTGACATCAGCTGGAACCTAGCACATAATATGTTGAAAGGGGGAGTTTACCTACCTAATATTCCCGGTGTGTTCCCACCGAGCTTATCTCAACTTCCAGCTGATTCTTCGTTTATTGAGCGTGCAGCCAGGCTCTCCTGTTTTAGTGGTGGAAATTTTGGTGATATGGTTGGCCATTTCAGCATTCCTGAGCCTATGGGTGTTTTTTCTAGAGGCATGGGAGTATTACCTGAGAGACGAGATGAGATTCCACGAAATGGGTTAGGTTCGGTATTTGGAACCGGAGGACAATCTCAAAGAAACATGGTTAACAGTGAAGCTTCCAAGCCTGTTTCTTTGACTAATGAACATGGAGCTACTGAAAGGGGTTCACCTAAAAATGGAAGCCCTTTGAAATTGGATGATCGTGGTAAACATGCTGTTGATGGTTCTGCTAATGAATCTGATGAAGCTGAGTTTAGCGGTGGTGATGGTTCGAGTGAGCCATGTACGTTAGAGGTCACAGGTAAGGAACTTTCTGCTAAGGGGCTCAGCTCAAGGAAAAGGAAAAGAAGTGGACAGAAGATTGAACTTGATCAAGCCAATGGACCTCTGCAACAACCTACTGTTTCAGCTAAGGATAATACTGAAACTCAGCAAAAGGGAGATCAAAATCCGAGTTCAACTGCAAACAAGGGTACAGGAAAACACGGTAAACAGGCGTCTCAACCTTCAGATGCGCCAAAGGAAGATTATATTCATGTTAGAGCTCGAAGGGGCCAGGCGACAAACAGCCATAGTCTTGCAGAAAGGGTAAGGAGGGAGAAGATCAGTGAGAGGATGAAGTTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTTACTGGAAAGGCAGTGATGCTAGATGAAATCATTAACTATGTCCAATCACTGCAACGGCAAGTAGAGTTTTTATCAATGAAACTGGCTACCGTTAATCCAAGGTTGGATATTAACATCGATGGGCTCCTAAACAAAGATATTCTTCAATCACGAGCTGGTCCATCGTCGACATTGGGATTTTCTTCACATATGCCCATTGCTTGTCCCCCGCCACATATTTCTCATCGTGGACTTATCCCAAGCAGTTTCCCTGCCATAGGGAGCTCTGAGATGTTAAGAAGCACAATAAGTTCCCAGATGACTCCAAGGTCTGGTGGATTTAAGGAGCCTACTCAGATAAAGAATGTGTGGGATGGTGAACTGCAAAACATTGTGCAGATGAGCTTTGGGATGTCCGCTATCCCCAATTGTTTAGAAGTTGAAGGATCTGATTCACCAGGCAATACAAAAGTTGAACATTGA 1689 43.58 MMDIGDRDKFRLETRTEDCINYSHGMSSDWRFGETTLTSMPMGLVLPGNVDVVRNQDMVGCCSSTAPMVESFSSSMWEQAANCQNLGICNIQDLNNCTTSNTIAINKASGCPVSLSSDIDRTLDISWNLAHNMLKGGVYLPNIPGVFPPSLSQLPADSSFIERAARLSCFSGGNFGDMVGHFSIPEPMGVFSRGMGVLPERRDEIPRNGLGSVFGTGGQSQRNMVNSEASKPVSLTNEHGATERGSPKNGSPLKLDDRGKHAVDGSANESDEAEFSGGDGSSEPCTLEVTGKELSAKGLSSRKRKRSGQKIELDQANGPLQQPTVSAKDNTETQQKGDQNPSSTANKGTGKHGKQASQPSDAPKEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGLLNKDILQSRAGPSSTLGFSSHMPIACPPPHISHRGLIPSSFPAIGSSEMLRSTISSQMTPRSGGFKEPTQIKNVWDGELQNIVQMSFGMSAIPNCLEVEGSDSPGNTKVEH 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 55051312 55055011 - Hsped.10g18320.1 Hepe10g1832 582379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1832 562 MobiDBLite consensus disorder prediction 297 311 - -
Hepe10g1832 562 CDD bHLH_AtBPE_like 366 451 - -
Hepe10g1832 562 Gene3D - 373 446 IPR036638 GO:0046983(InterPro)
Hepe10g1832 562 MobiDBLite consensus disorder prediction 213 244 - -
Hepe10g1832 562 MobiDBLite consensus disorder prediction 314 356 - -
Hepe10g1832 562 FunFam Basic helix-loop-helix transcription factor 373 445 - -
Hepe10g1832 562 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 376 426 IPR011598 GO:0046983(InterPro)
Hepe10g1832 562 Pfam Helix-loop-helix DNA-binding domain 379 427 IPR011598 GO:0046983(InterPro)
Hepe10g1832 562 SMART finulus 382 432 IPR011598 GO:0046983(InterPro)
Hepe10g1832 562 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 151 538 IPR024097 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Hepe10g1832 562 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 374 444 IPR036638 GO:0046983(InterPro)
Hepe10g1832 562 MobiDBLite consensus disorder prediction 250 268 - -
Hepe10g1832 562 MobiDBLite consensus disorder prediction 202 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0492 Hepe-Chr2:4842224 Hepe10g1832 Hepe-Chr10:55051312 1.40e-46 dispersed
Hepe02g2543 Hepe-Chr2:72377186 Hepe10g1832 Hepe-Chr10:55051312 7.07e-141 dispersed
Hepe05g0559 Hepe-Chr5:7858536 Hepe10g1832 Hepe-Chr10:55051312 4.84e-38 dispersed
Hepe05g1307 Hepe-Chr5:61222815 Hepe10g1832 Hepe-Chr10:55051312 1.11e-50 dispersed
Hepe07g2084 Hepe-Chr7:65134691 Hepe10g1832 Hepe-Chr10:55051312 3.17e-35 dispersed
Hepe07g2392 Hepe-Chr7:68266336 Hepe10g1832 Hepe-Chr10:55051312 5.29e-33 dispersed
Hepe08g1014 Hepe-Chr8:9657898 Hepe10g1832 Hepe-Chr10:55051312 7.72e-37 dispersed
Hepe08g1356 Hepe-Chr8:15782176 Hepe10g1832 Hepe-Chr10:55051312 5.72e-41 dispersed
Hepe08g1558 Hepe-Chr8:21104652 Hepe10g1832 Hepe-Chr10:55051312 1.35e-37 dispersed
Hepe09g0154 Hepe-Chr9:1222942 Hepe10g1832 Hepe-Chr10:55051312 9.92e-40 dispersed
Hepe09g1096 Hepe-Chr9:12261210 Hepe10g1832 Hepe-Chr10:55051312 5.47e-11 dispersed
Hepe09g1288 Hepe-Chr9:17812091 Hepe10g1832 Hepe-Chr10:55051312 9.85e-13 dispersed
Hepe09g1511 Hepe-Chr9:38643167 Hepe10g1832 Hepe-Chr10:55051312 1.00e-17 dispersed
Hepe10g1832 Hepe-Chr10:55051312 Hepe01g1851 Hepe-Chr1:83410454 2.16e-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56558 PF00010 HLH 6.30E-06 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1832 - - - 0.0