Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1840 ATGGCAATCTCAAGCCTTGTTTATGGAGTGATGGTGCTTTCTGTCTTCTTTGCTGTGAGCCACAGCTTGTTTGAGACAGGTGACCCCCCATTGAGGTTGGATTACTATGCCAAAACTTGTCCCAATGTGTTGCAGGTTGTGAGGAAAGAGATGGAGTGTGCAGTGCTTTCTGACCCACGTTCTGCAGCTTTTCTTGTCCGTTTGCACTTCCATGACTGCTTTGTCCAGGTGGGTGGCCCTTACTGGGAGGTTCCTCTTGGAAGAAAGGATTCCACAACTGCGAGTCATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGGCTTCTGAGCATCATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGACATGGTAGCTCTATCAGGAGCGCACACGATTGGAATGGCGAGGTGCGAGAATTTCCGGGAAAGGATTTATGGGGATTTCGAAGCAACTTCAGATACTAACAACAATCCAATTTCGCAGTCATATGTTGAGAAGTTGAGGTCAATATGCCCCCCAAAGGGTGCAGATAACAACATAACAGCAATGGACAATGTGACACCAGAGTTGTTTGACAATTCCTATTTCCACATCTTGATGAGAGGAGAAGGGATTTTGAATTCAGACCAGGAATTGTATTCCAGCCTTCTGGGAATGGAAACCAGAGCTCTGGTGAAGAAATATGCTGCTGACCCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTCAAGTTGGGAAATATTACCAACTCTGATAGCTTTTTCACTGGGGAAGTTAGGAAAAACTGCAGGTTTATCAACACATGA 822 45.38 MAISSLVYGVMVLSVFFAVSHSLFETGDPPLRLDYYAKTCPNVLQVVRKEMECAVLSDPRSAAFLVRLHFHDCFVQVGGPYWEVPLGRKDSTTASHELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDFEATSDTNNNPISQSYVEKLRSICPPKGADNNITAMDNVTPELFDNSYFHILMRGEGILNSDQELYSSLLGMETRALVKKYAADPLAFFQQFSDSMVKLGNITNSDSFFTGEVRKNCRFINT 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 55130923 55134642 + Hsped.10g18400.1 Hepe10g1840 582387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1840 273 Gene3D - 31 77 - -
Hepe10g1840 273 PANTHER PEROXIDASE 72-RELATED 14 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 Gene3D - 78 272 - -
Hepe10g1840 273 SUPERFAMILY Heme-dependent peroxidases 31 272 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 FunFam Peroxidase 104 250 - -
Hepe10g1840 273 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Hepe10g1840 273 PRINTS Plant peroxidase signature 37 47 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 PRINTS Plant peroxidase signature 245 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 PRINTS Plant peroxidase signature 202 219 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 PRINTS Plant peroxidase signature 186 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 ProSiteProfiles Plant heme peroxidase family profile. 42 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 126 136 IPR019793 -
Hepe10g1840 273 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 Pfam Peroxidase 76 235 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe10g1840 273 Gene3D Peroxidase, domain 2 104 250 - -
Hepe10g1840 273 CDD secretory_peroxidase 31 271 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe10g1840 Hepe-Chr10:55130923 Hepe01g0185 Hepe-Chr1:30392305 1.45e-49 dispersed
Hepe10g1840 Hepe-Chr10:55130923 Hepe04g1554 Hepe-Chr4:71086778 8.58e-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1840 K00430 - csv:101216779 354.369