Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1850 ATGGCGGCCGTATCTCCGGCGCCTAATTCATCTCCATCGCCGGCTTCTCCCTCTACTCCATCTCCGCCGCCTCCCGTCGCATCTACTCCGTCTCCGCCGCAATCTCCTTCTCCACCGCCGCAACAATCGCCTCCTCCGATCACAACTCCCACTCCGTCTCCTCCTCCGCCGTCTCGTCAACCATCTGGAACTCCGCCGCCACCAACACCCGCATTGTCTCCTCCGCCGGCAACTCCACCACCAACTCCGTCCAAGGCTCCGCCCCCATCAACACCGGACCCTCCACCACCATCAGCAACCCCACCAGTAAGCTCCACTCCACCAACACCATCTAATCCCCCACCCAATTCACCTCCACCTCCTGCAGCAGAGCCTCCTCAAAACCCACCTCCACAATCATCAAACCCACCTGAAAACTCACCTCCGTCGCCCCCACCACCGCCACAAGCCAACCCACCGGACAATCCATCCCCACCGCCACAGCCTACAAACCCACCTGAGAATTCACCCCCCACACCTCCAGAAACTTCACCTCCCTTACCAGCGTCAATACCTCCACCTCCAAGGCTTACTCCTCCTCCTCCCGGTGAGCCCTCGCCTTCAAGTCCTCCTCCCAAGTCATCGCCGCCCCCATCTTTCGCACCACCTCCGCCGTCACTCTTTTCTCCTCCAGTACCGTCTAAACCCCCAACATTGCCGTCAGGAAATCGCACTGACGGTGGTTCTGGTCCTAATGTTGGGGTAAACTCAAATTCCAACAGCAATGGAGGGATTAATACTGGGGGTGTGATTGCAATTGGTGTAGTGGCTGGACTTGTAGTTCTTTCCATAGTTGGGTTTGTTGTATGGTACATCAGGAAGCCAAGGAAAAATGATTCTGGGCGTGGGGGTTACATTATGCCCTCCTCTCTCGGCTCCTCGCCCAAGTCAGAATCATCCCTTATGAAGGTCCATTCCGCACTTCACCAAGACAGACACGGCACTGGCACTGCCAGTGCCAGTGGTGGAATATACTCTCCAAAAGAGCTTGGTGGGTTGGGCAACTCAAGGTCATTGTTTACATATGAAGAACTCTTCAAAGCAACAAATGCATTTTCTGCTCAGAATCTTTTGGGAGAAGGTGGATTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGAGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGTCAGGGTGAGCAGGAATTCAAAGCTGAAGTCGAGATTATTGGTCGTGTACACCACCGCCATTTGGTTTCTCTTGTGGGCTACTGCATTTTAGAGCATCAAAGATTGCTTGTCTATGATTATGTCCCTAACAATTCCCTTTACTATCATCTTCATGTTAAAGGGGATGACAAGCTCGTTCTGGACTGGGCAAAACGCATTAAGATTGCTGCTGGTGCAGCCCGGGGAATTGCTTATCTTCATGAAGACTGTCATCCTCGAATTATCCACCGTGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCGGACTTTGGGCTAGCTAAGTTAGCTCTCGACGCACAAACTCATATAACCACCCGTGTTGTGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCAAGTGGAAAGTTAACTGAAAGATCAGATGTATATTCTTTTGGAGTCCTGCTGCTCGAGCTGATTACTGGTCGGAAGGCTGTGGATTCATCCCAGCCAATGGGGGATGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAAAGATTGGTGGACCCGAGGCTTGAAAGGAACTATGTTGAGAGTGAAATGTTGAAGATGATAGGAATAGCTGCTGCTTGCGTGCGGCATGCGTCTACCAAGAGACCACAGATGGGACAGGTTGTCAGAGCTTTTGATAGTTTAGCCACTACAGATTTAAGTAATGGAATGCGATTCGGTGAGAGCCAAGCTTTCGATTCCGGTCAACAATCTGCCGAAATTAGATTTTTCCGAATGCTGGCATTTGGTAACCGAGATTACAGTTCAGATTTTTATAGCCAAGCTTTTCGAGTTTTCGAGTTCTTTTACTCATTCAGGCCTTTACATTGTAGCAGTCATGAATTTCTGCAGTTTTGTGAAGAGAATGCTTGA 2157 49.98 MAAVSPAPNSSPSPASPSTPSPPPPVASTPSPPQSPSPPPQQSPPPITTPTPSPPPPSRQPSGTPPPPTPALSPPPATPPPTPSKAPPPSTPDPPPPSATPPVSSTPPTPSNPPPNSPPPPAAEPPQNPPPQSSNPPENSPPSPPPPPQANPPDNPSPPPQPTNPPENSPPTPPETSPPLPASIPPPPRLTPPPPGEPSPSSPPPKSSPPPSFAPPPPSLFSPPVPSKPPTLPSGNRTDGGSGPNVGVNSNSNSNGGINTGGVIAIGVVAGLVVLSIVGFVVWYIRKPRKNDSGRGGYIMPSSLGSSPKSESSLMKVHSALHQDRHGTGTASASGGIYSPKELGGLGNSRSLFTYEELFKATNAFSAQNLLGEGGFGSVYKGYLPDGREVAVKELKIGGGQGEQEFKAEVEIIGRVHHRHLVSLVGYCILEHQRLLVYDYVPNNSLYYHLHVKGDDKLVLDWAKRIKIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDAQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVLLLELITGRKAVDSSQPMGDESLVEWARPLLNHALDSQDFERLVDPRLERNYVESEMLKMIGIAAACVRHASTKRPQMGQVVRAFDSLATTDLSNGMRFGESQAFDSGQQSAEIRFFRMLAFGNRDYSSDFYSQAFRVFEFFYSFRPLHCSSHEFLQFCEENA 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 55220573 55224362 + Hsped.10g18500.1 Hepe10g1850 582397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1850 718 Gene3D Transferase(Phosphotransferase) domain 1 441 660 - -
Hepe10g1850 718 FunFam proline-rich receptor-like protein kinase PERK8 441 654 - -
Hepe10g1850 718 Gene3D Phosphorylase Kinase; domain 1 340 440 - -
Hepe10g1850 718 PRINTS Proline rich extensin signature 6 18 - -
Hepe10g1850 718 PRINTS Proline rich extensin signature 56 77 - -
Hepe10g1850 718 PRINTS Proline rich extensin signature 43 55 - -
Hepe10g1850 718 PRINTS Proline rich extensin signature 22 38 - -
Hepe10g1850 718 SMART serkin_6 365 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1850 718 MobiDBLite consensus disorder prediction 232 253 - -
Hepe10g1850 718 MobiDBLite consensus disorder prediction 294 314 - -
Hepe10g1850 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1850 718 MobiDBLite consensus disorder prediction 10 231 - -
Hepe10g1850 718 Pfam Protein tyrosine and serine/threonine kinase 368 639 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1850 718 CDD STKc_IRAK 371 643 - -
Hepe10g1850 718 ProSiteProfiles Protein kinase domain profile. 365 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1850 718 MobiDBLite consensus disorder prediction 1 253 - -
Hepe10g1850 718 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524(InterPro)
Hepe10g1850 718 SUPERFAMILY Protein kinase-like (PK-like) 348 638 IPR011009 -
Hepe10g1850 718 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 243 672 IPR047117 -
Hepe10g1850 718 FunFam Proline-rich receptor-like protein kinase PERK8 338 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2485 Hepe-Chr2:71389676 Hepe10g1850 Hepe-Chr10:55220573 3.44e-62 dispersed
Hepe07g2085 Hepe-Chr7:65147254 Hepe10g1850 Hepe-Chr10:55220573 2.07e-60 dispersed
Hepe08g2232 Hepe-Chr8:62070809 Hepe10g1850 Hepe-Chr10:55220573 1.42e-91 dispersed
Hepe08g2594 Hepe-Chr8:67789271 Hepe10g1850 Hepe-Chr10:55220573 4.08e-138 dispersed
Hepe09g0248 Hepe-Chr9:2131131 Hepe10g1850 Hepe-Chr10:55220573 4.09e-63 dispersed
Hepe09g0512 Hepe-Chr9:4768475 Hepe10g1850 Hepe-Chr10:55220573 6.17e-85 dispersed
Hepe09g0761 Hepe-Chr9:7360508 Hepe10g1850 Hepe-Chr10:55220573 1.69e-136 dispersed
Hepe09g0858 Hepe-Chr9:8486540 Hepe10g1850 Hepe-Chr10:55220573 6.16e-86 dispersed
Hepe09g0874 Hepe-Chr9:8680676 Hepe10g1850 Hepe-Chr10:55220573 6.18e-88 dispersed
Hepe10g1640 Hepe-Chr10:53099303 Hepe10g1850 Hepe-Chr10:55220573 1.88e-116 dispersed
Hepe10g1850 Hepe-Chr10:55220573 Hepe10g1715 Hepe-Chr10:53888687 1.65e-81 dispersed
Hepe02g2483 Hepe-Chr2:71356376 Hepe10g1850 Hepe-Chr10:55220573 6.86e-56 transposed
Hepe04g1880 Hepe-Chr4:73732383 Hepe10g1850 Hepe-Chr10:55220573 2.08e-46 transposed
Hepe10g1850 Hepe-Chr10:55220573 Hepe02g3246 Hepe-Chr2:82026244 5.80e-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73201 PF00069 Pkinase 1.40E-43 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1850 - - - 0.0