Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1852 ATGAGCGGCGGCAGAAGGAGGAAGCTGCATTTTAGCAAGATCTACTCGTTTGCTTGTGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGTCCGGGGTTTTCTCGAGTTGTTTTTTGCAATGAACCAGAGTGTTTTGAGGCAGTAATTCGTAACTACATAGACAATTATGTTAGTACCACCAAGTATACTTTAGCTACTTTCCTGCCAAAGTCCTTGTTTGAGCAATTCAGGAGGGCGGCCAATTTCTACTTTTTAGTCAGTGGGATCCTTGCTTTTACTTCCCTTGCTCCTTACACGGCTGTCAGCGCGATTATCCCTCTTGTTCTTGTCATTATGGCGACAATGACCAAAGAAGGGATCGAAGATTTGAGGCGAAAAAAACAGGATAATGTGATTAACAATAGAAAGGTTAAAGTGCATCAAGGTGATGGAGTTTTTTCTTATACAGAGTGGAAAAATCTGAGGGTGGGTAATATAGTGAAAGTGGAGAAGGATGAATTCTTTCCAGCAGATATCATCTTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTCGAGACGATGAACCTTGATGGTGAGACAAATTTGAAACTAAAACAAGCATTGGATGTAACTTTGCATATGCACGAGGATTCTATCTTCGACAGCTTTAAGGCTATCATAAAATGTGAGGATCCAAATGCAAATTTATACTGTTTTGTTGGTAGCATGGAGTTGGAAGAGCAACAGTATCCTCTATCTCCTCAACAACTACTCCTTCGAGACTCTAAACTCCGGAATACGGAATATATATATGGGGTTGTTGTCTTTACTGGTCGTGACACAAAGGTTATTCAAAATTCTACCGACCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAGATGGATCAAATTATATATTGTTTGTTCGGTCTTCTATTTTTGCTTGCTCTTATAGGATCTATATTTTTTGGCCTTGTGACTGACGATGATTTGGAAAATGGGAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCCATAGTTTTCTATGATCCAAAAAGGGCTACTATAGCTGCAATTCTCCATTTTCTTACAGCATTGATGTTATATAACTACTTCATTCCAATCTCATTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAGAGCATATTTATCAATCAAGATATTAATATGTATTATGAAGAAGCTAATAAACCTGCACGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTCGATACGATACTTTCTGACAAGACAGGAACTCTGACCTGTAATTCCATGGAGTTCATTAAGTGTTCTGTGGCAGGAAGGGCTTATGGTCGTGGTATCACAGAGGTAGAAAGGACTATAGGTGGACATAAAGCTTCACCACTGCATGAATCTGCAAATGGTGGGAATCACCACGAGGATGTCACTAATAAAACTTCACATATCAAGGGCTTCAATTTTAAGGATGATAGGATTATGAATGGGAACTGGGTTCATGAGCCTCATGCAAATGTCATCCAAATGTTTTTCCGTCTTCTTGCAACTTGTCATACGGCAATACCTGAAATCAACGACGACAACGGAGAGGTTTCTTATGAGGCTGAATCACCAGATGAAGCAGCATTTGTGATTACAGCTAGGGAATTTGGCTTTGAGTTCTACAAAAGAGCACAGACAAGCATATCTCTGCATGAGTTTGATCCTTCATTAGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTTTGGAGTTTAATAGCTCAAGAAAGAGGATGTCTGTCATAGTAAGAAGCGAGGAGGAGAAAATATTTTTGTTCTGTAAAGGTGCAGACAGTGTCATGTTTGAAAGGCTTGGAAAGAATGGAAGGGAGTTTGAAGAGGAGACCAAGGAACATGTCAGTGAGTATGCCGATGCAGGGTTGAGGACTTTGATACTTGCCTATCGCGAGTTTGAAGAGGAAGAATACAGAGAATTTGATGACAAGTTCACTAAGGCCAAAAGTTCGGTTAGTGCAGATCGAGAATCATTGATTGATAACGTAACCGACAAAATCGAGGGGAATCTAATTCTTCTTGGTGCTACTGCTGTAGAGGACAAGCTTCAAAAAGGGGTTCCCGAGTGCATTGACAGGCTTGCTCAGGCAGGAATTAAGATTTGGGTTTTGACCGGGGACAAAATGGAGACAGCCATAAATATTGGTTTCGCCTGTAGCTTACTACGACAAGATATGAAGCAGATTGTTATTACTCTGGAGACATCAGAAATTCGGGCGCTAGAAAAGACAGGGGATATGGCTTCCATCTTCAAGGCATCGATGCAATGTGTCCTCGATCAGATTACTCGAGGGAAAGCTCTGGTCAGATCCTCAAGTGGGACATCTGAAGCATTTGCATTAATTATTGATGGGAAATCACTTTCTTATGCATTAGAGGACAGTTTGAAGACATTGTTTCTAGAGCTGGCGATTTGTTGTGCTTCTGTTATTTGCTGCCGTGCATCTCCAAAACAGAAGGCAATGGTAACAAGGTTAGTTAAAGCTGGAACACGGAAAACAACTTTAGCTATTGGCGACGGTGCCAATGATGTAGGAATGCTTCAAGAAGCGGATATTGGAGTCGGAATTAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCGAGTGATGTTGCAATTGCACAGTTTAAATATCTAGAGCGCCTGCTTCTTGTACATGGACATTGGTGCTACAGAAGGATATCATCAATGATTTGCTACTTTTTCTATAAGAATATTACTTTTGGTTTTACCATATTCTTATACGAAGCATTCACATCATTCTCTGGGCAACCTGCATATAATGATTGGTTTTTATCACTTTACAATGTTTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGAGTTTTTGATCAGGACGTATCCGCAAGACTCTGCCTCCAGTTTTCTCTCTTATACCAAGAAGGGGTGCACAATGCTCTTTTCAGCTGGCCCCGAATACTCAGTTGGATGTTTAATGGATTGTGCAGTGCTGTGATCATTTTCTTCCTGTGCACTAAAGCAATTGAGCAACAGGCGTTCAACTCCGACGGGAAAACTGCAGGGCGGGATATTCTGGGTGCAACAATGTACTCTTGTGTTGTTTGGGTCGTGAACTTGCAAATGGCGCTCGCTGTTAGTTACTTCACCTTGATACAACATCTTTTCATCTGGGGTTCGATTTCGATCTGGTACATTTTTCTCCTGATTTATGGGTCCATGACCCCCACCTTCTCAACCAATGCTTACAAGATCTTCATTGAAGTCCTTGCCCCTGCCCCTACCTACTGGCTTGTGCTTCTCTTTGTGGTCATCTCAACACTCATTCCTTACTTCTCCTACTCAGCAATACAAATGAGGTTCTTTCCCATGTATCATCAAATGATTTTATGGATTAGGAATGAAGGACAACTAAACAACCAAGAGTACTGTGATATTTTGCGGAAGATCAATTTCCGATCGACGAGCGTGGGTTCCACAGCACGTTTAGAAGCCAAAAGGAGCCGCTTAAGAGAGCGAAACAAGAGTGCTACTTGA 3588 41.3 MSGGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPECFEAVIRNYIDNYVSTTKYTLATFLPKSLFEQFRRAANFYFLVSGILAFTSLAPYTAVSAIIPLVLVIMATMTKEGIEDLRRKKQDNVINNRKVKVHQGDGVFSYTEWKNLRVGNIVKVEKDEFFPADIILLSSSYEDAICYVETMNLDGETNLKLKQALDVTLHMHEDSIFDSFKAIIKCEDPNANLYCFVGSMELEEQQYPLSPQQLLLRDSKLRNTEYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDQIIYCLFGLLFLLALIGSIFFGLVTDDDLENGRMKRWYLRPDDAIVFYDPKRATIAAILHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEANKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGITEVERTIGGHKASPLHESANGGNHHEDVTNKTSHIKGFNFKDDRIMNGNWVHEPHANVIQMFFRLLATCHTAIPEINDDNGEVSYEAESPDEAAFVITAREFGFEFYKRAQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRSEEEKIFLFCKGADSVMFERLGKNGREFEEETKEHVSEYADAGLRTLILAYREFEEEEYREFDDKFTKAKSSVSADRESLIDNVTDKIEGNLILLGATAVEDKLQKGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVITLETSEIRALEKTGDMASIFKASMQCVLDQITRGKALVRSSSGTSEAFALIIDGKSLSYALEDSLKTLFLELAICCASVICCRASPKQKAMVTRLVKAGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDVAIAQFKYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFSLLYQEGVHNALFSWPRILSWMFNGLCSAVIIFFLCTKAIEQQAFNSDGKTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYGSMTPTFSTNAYKIFIEVLAPAPTYWLVLLFVVISTLIPYFSYSAIQMRFFPMYHQMILWIRNEGQLNNQEYCDILRKINFRSTSVGSTARLEAKRSRLRERNKSAT 1195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 55234707 55241272 - Hsped.10g18520.1 Hepe10g1852 582399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1852 1195 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Hepe10g1852 1195 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Hepe10g1852 1195 PRINTS P-type cation-transporting ATPase superfamily signature 760 770 - -
Hepe10g1852 1195 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Hepe10g1852 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Hepe10g1852 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 666 IPR023299 GO:0000166(InterPro)
Hepe10g1852 1195 Gene3D - 560 675 IPR023299 GO:0000166(InterPro)
Hepe10g1852 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1150 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Hepe10g1852 1195 FunFam Phospholipid-transporting ATPase 116 286 - -
Hepe10g1852 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1140 IPR023298 -
Hepe10g1852 1195 Gene3D - 114 286 - -
Hepe10g1852 1195 FunFam Phospholipid-transporting ATPase 698 902 - -
Hepe10g1852 1195 NCBIfam HAD-IC family P-type ATPase 828 944 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe10g1852 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Hepe10g1852 1195 FunFam Phospholipid-transporting ATPase 540 698 - -
Hepe10g1852 1195 SFLD Haloacid Dehalogenase 408 913 - -
Hepe10g1852 1195 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Hepe10g1852 1195 SUPERFAMILY Calcium ATPase, transduction domain A 139 283 IPR008250 -
Hepe10g1852 1195 SUPERFAMILY HAD-like 412 906 IPR036412 -
Hepe10g1852 1195 SFLD p-type atpase 408 913 IPR044492 -
Hepe10g1852 1195 Pfam Cation transport ATPase (P-type) 520 624 - -
Hepe10g1852 1195 Gene3D - 694 902 IPR023214 -
Hepe10g1852 1195 NCBIfam phospholipid-translocating P-type ATPase 55 1146 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1453 Hepe-Chr3:71293539 Hepe10g1852 Hepe-Chr10:55234707 0.0 dispersed
Hepe07g2425 Hepe-Chr7:68624261 Hepe10g1852 Hepe-Chr10:55234707 0.0 dispersed
Hepe10g1693 Hepe-Chr10:53626683 Hepe10g1852 Hepe-Chr10:55234707 0.0 dispersed
Hepe10g1852 Hepe-Chr10:55234707 Hepe02g2152 Hepe-Chr2:58261726 0.0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1852 K01530 - csv:101207148 2110.88