Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe10g1852 | ATGAGCGGCGGCAGAAGGAGGAAGCTGCATTTTAGCAAGATCTACTCGTTTGCTTGTGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGTCCGGGGTTTTCTCGAGTTGTTTTTTGCAATGAACCAGAGTGTTTTGAGGCAGTAATTCGTAACTACATAGACAATTATGTTAGTACCACCAAGTATACTTTAGCTACTTTCCTGCCAAAGTCCTTGTTTGAGCAATTCAGGAGGGCGGCCAATTTCTACTTTTTAGTCAGTGGGATCCTTGCTTTTACTTCCCTTGCTCCTTACACGGCTGTCAGCGCGATTATCCCTCTTGTTCTTGTCATTATGGCGACAATGACCAAAGAAGGGATCGAAGATTTGAGGCGAAAAAAACAGGATAATGTGATTAACAATAGAAAGGTTAAAGTGCATCAAGGTGATGGAGTTTTTTCTTATACAGAGTGGAAAAATCTGAGGGTGGGTAATATAGTGAAAGTGGAGAAGGATGAATTCTTTCCAGCAGATATCATCTTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTCGAGACGATGAACCTTGATGGTGAGACAAATTTGAAACTAAAACAAGCATTGGATGTAACTTTGCATATGCACGAGGATTCTATCTTCGACAGCTTTAAGGCTATCATAAAATGTGAGGATCCAAATGCAAATTTATACTGTTTTGTTGGTAGCATGGAGTTGGAAGAGCAACAGTATCCTCTATCTCCTCAACAACTACTCCTTCGAGACTCTAAACTCCGGAATACGGAATATATATATGGGGTTGTTGTCTTTACTGGTCGTGACACAAAGGTTATTCAAAATTCTACCGACCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAGATGGATCAAATTATATATTGTTTGTTCGGTCTTCTATTTTTGCTTGCTCTTATAGGATCTATATTTTTTGGCCTTGTGACTGACGATGATTTGGAAAATGGGAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCCATAGTTTTCTATGATCCAAAAAGGGCTACTATAGCTGCAATTCTCCATTTTCTTACAGCATTGATGTTATATAACTACTTCATTCCAATCTCATTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAGAGCATATTTATCAATCAAGATATTAATATGTATTATGAAGAAGCTAATAAACCTGCACGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTCGATACGATACTTTCTGACAAGACAGGAACTCTGACCTGTAATTCCATGGAGTTCATTAAGTGTTCTGTGGCAGGAAGGGCTTATGGTCGTGGTATCACAGAGGTAGAAAGGACTATAGGTGGACATAAAGCTTCACCACTGCATGAATCTGCAAATGGTGGGAATCACCACGAGGATGTCACTAATAAAACTTCACATATCAAGGGCTTCAATTTTAAGGATGATAGGATTATGAATGGGAACTGGGTTCATGAGCCTCATGCAAATGTCATCCAAATGTTTTTCCGTCTTCTTGCAACTTGTCATACGGCAATACCTGAAATCAACGACGACAACGGAGAGGTTTCTTATGAGGCTGAATCACCAGATGAAGCAGCATTTGTGATTACAGCTAGGGAATTTGGCTTTGAGTTCTACAAAAGAGCACAGACAAGCATATCTCTGCATGAGTTTGATCCTTCATTAGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTTTGGAGTTTAATAGCTCAAGAAAGAGGATGTCTGTCATAGTAAGAAGCGAGGAGGAGAAAATATTTTTGTTCTGTAAAGGTGCAGACAGTGTCATGTTTGAAAGGCTTGGAAAGAATGGAAGGGAGTTTGAAGAGGAGACCAAGGAACATGTCAGTGAGTATGCCGATGCAGGGTTGAGGACTTTGATACTTGCCTATCGCGAGTTTGAAGAGGAAGAATACAGAGAATTTGATGACAAGTTCACTAAGGCCAAAAGTTCGGTTAGTGCAGATCGAGAATCATTGATTGATAACGTAACCGACAAAATCGAGGGGAATCTAATTCTTCTTGGTGCTACTGCTGTAGAGGACAAGCTTCAAAAAGGGGTTCCCGAGTGCATTGACAGGCTTGCTCAGGCAGGAATTAAGATTTGGGTTTTGACCGGGGACAAAATGGAGACAGCCATAAATATTGGTTTCGCCTGTAGCTTACTACGACAAGATATGAAGCAGATTGTTATTACTCTGGAGACATCAGAAATTCGGGCGCTAGAAAAGACAGGGGATATGGCTTCCATCTTCAAGGCATCGATGCAATGTGTCCTCGATCAGATTACTCGAGGGAAAGCTCTGGTCAGATCCTCAAGTGGGACATCTGAAGCATTTGCATTAATTATTGATGGGAAATCACTTTCTTATGCATTAGAGGACAGTTTGAAGACATTGTTTCTAGAGCTGGCGATTTGTTGTGCTTCTGTTATTTGCTGCCGTGCATCTCCAAAACAGAAGGCAATGGTAACAAGGTTAGTTAAAGCTGGAACACGGAAAACAACTTTAGCTATTGGCGACGGTGCCAATGATGTAGGAATGCTTCAAGAAGCGGATATTGGAGTCGGAATTAGTGGTGTTGAAGGAATGCAGGCCGTTATGTCGAGTGATGTTGCAATTGCACAGTTTAAATATCTAGAGCGCCTGCTTCTTGTACATGGACATTGGTGCTACAGAAGGATATCATCAATGATTTGCTACTTTTTCTATAAGAATATTACTTTTGGTTTTACCATATTCTTATACGAAGCATTCACATCATTCTCTGGGCAACCTGCATATAATGATTGGTTTTTATCACTTTACAATGTTTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGAGTTTTTGATCAGGACGTATCCGCAAGACTCTGCCTCCAGTTTTCTCTCTTATACCAAGAAGGGGTGCACAATGCTCTTTTCAGCTGGCCCCGAATACTCAGTTGGATGTTTAATGGATTGTGCAGTGCTGTGATCATTTTCTTCCTGTGCACTAAAGCAATTGAGCAACAGGCGTTCAACTCCGACGGGAAAACTGCAGGGCGGGATATTCTGGGTGCAACAATGTACTCTTGTGTTGTTTGGGTCGTGAACTTGCAAATGGCGCTCGCTGTTAGTTACTTCACCTTGATACAACATCTTTTCATCTGGGGTTCGATTTCGATCTGGTACATTTTTCTCCTGATTTATGGGTCCATGACCCCCACCTTCTCAACCAATGCTTACAAGATCTTCATTGAAGTCCTTGCCCCTGCCCCTACCTACTGGCTTGTGCTTCTCTTTGTGGTCATCTCAACACTCATTCCTTACTTCTCCTACTCAGCAATACAAATGAGGTTCTTTCCCATGTATCATCAAATGATTTTATGGATTAGGAATGAAGGACAACTAAACAACCAAGAGTACTGTGATATTTTGCGGAAGATCAATTTCCGATCGACGAGCGTGGGTTCCACAGCACGTTTAGAAGCCAAAAGGAGCCGCTTAAGAGAGCGAAACAAGAGTGCTACTTGA | 3588 | 41.3 | MSGGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPECFEAVIRNYIDNYVSTTKYTLATFLPKSLFEQFRRAANFYFLVSGILAFTSLAPYTAVSAIIPLVLVIMATMTKEGIEDLRRKKQDNVINNRKVKVHQGDGVFSYTEWKNLRVGNIVKVEKDEFFPADIILLSSSYEDAICYVETMNLDGETNLKLKQALDVTLHMHEDSIFDSFKAIIKCEDPNANLYCFVGSMELEEQQYPLSPQQLLLRDSKLRNTEYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDQIIYCLFGLLFLLALIGSIFFGLVTDDDLENGRMKRWYLRPDDAIVFYDPKRATIAAILHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEANKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGITEVERTIGGHKASPLHESANGGNHHEDVTNKTSHIKGFNFKDDRIMNGNWVHEPHANVIQMFFRLLATCHTAIPEINDDNGEVSYEAESPDEAAFVITAREFGFEFYKRAQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRSEEEKIFLFCKGADSVMFERLGKNGREFEEETKEHVSEYADAGLRTLILAYREFEEEEYREFDDKFTKAKSSVSADRESLIDNVTDKIEGNLILLGATAVEDKLQKGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVITLETSEIRALEKTGDMASIFKASMQCVLDQITRGKALVRSSSGTSEAFALIIDGKSLSYALEDSLKTLFLELAICCASVICCRASPKQKAMVTRLVKAGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDVAIAQFKYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFSLLYQEGVHNALFSWPRILSWMFNGLCSAVIIFFLCTKAIEQQAFNSDGKTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYGSMTPTFSTNAYKIFIEVLAPAPTYWLVLLFVVISTLIPYFSYSAIQMRFFPMYHQMILWIRNEGQLNNQEYCDILRKINFRSTSVGSTARLEAKRSRLRERNKSAT | 1195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 55234707 | 55241272 | - | Hsped.10g18520.1 | Hepe10g1852 | 582399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe10g1852 | 1195 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 106 | IPR032631 | - | |
Hepe10g1852 | 1195 | PRINTS | P-type cation-transporting ATPase superfamily signature | 862 | 881 | - | - | |
Hepe10g1852 | 1195 | PRINTS | P-type cation-transporting ATPase superfamily signature | 760 | 770 | - | - | |
Hepe10g1852 | 1195 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
Hepe10g1852 | 1195 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 890 | 1140 | IPR032630 | - | |
Hepe10g1852 | 1195 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 497 | 666 | IPR023299 | GO:0000166(InterPro) | |
Hepe10g1852 | 1195 | Gene3D | - | 560 | 675 | IPR023299 | GO:0000166(InterPro) | |
Hepe10g1852 | 1195 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 30 | 1150 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
Hepe10g1852 | 1195 | FunFam | Phospholipid-transporting ATPase | 116 | 286 | - | - | |
Hepe10g1852 | 1195 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 51 | 1140 | IPR023298 | - | |
Hepe10g1852 | 1195 | Gene3D | - | 114 | 286 | - | - | |
Hepe10g1852 | 1195 | FunFam | Phospholipid-transporting ATPase | 698 | 902 | - | - | |
Hepe10g1852 | 1195 | NCBIfam | HAD-IC family P-type ATPase | 828 | 944 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Hepe10g1852 | 1195 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 426 | 432 | IPR018303 | - | |
Hepe10g1852 | 1195 | FunFam | Phospholipid-transporting ATPase | 540 | 698 | - | - | |
Hepe10g1852 | 1195 | SFLD | Haloacid Dehalogenase | 408 | 913 | - | - | |
Hepe10g1852 | 1195 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1022 | - | - | |
Hepe10g1852 | 1195 | SUPERFAMILY | Calcium ATPase, transduction domain A | 139 | 283 | IPR008250 | - | |
Hepe10g1852 | 1195 | SUPERFAMILY | HAD-like | 412 | 906 | IPR036412 | - | |
Hepe10g1852 | 1195 | SFLD | p-type atpase | 408 | 913 | IPR044492 | - | |
Hepe10g1852 | 1195 | Pfam | Cation transport ATPase (P-type) | 520 | 624 | - | - | |
Hepe10g1852 | 1195 | Gene3D | - | 694 | 902 | IPR023214 | - | |
Hepe10g1852 | 1195 | NCBIfam | phospholipid-translocating P-type ATPase | 55 | 1146 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1453 | Hepe-Chr3:71293539 | Hepe10g1852 | Hepe-Chr10:55234707 | 0.0 | dispersed | |
Hepe07g2425 | Hepe-Chr7:68624261 | Hepe10g1852 | Hepe-Chr10:55234707 | 0.0 | dispersed | |
Hepe10g1693 | Hepe-Chr10:53626683 | Hepe10g1852 | Hepe-Chr10:55234707 | 0.0 | dispersed | |
Hepe10g1852 | Hepe-Chr10:55234707 | Hepe02g2152 | Hepe-Chr2:58261726 | 0.0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe10g1852 | K01530 | - | csv:101207148 | 2110.88 |