Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1874 ATGAACAGAACCTTCTTTTTCCTCCATTTTCTTCTTCTCGCTATCGCCGGAGAGAGCTCCGGTGACGGTGCTGCTGCTGTTGAGACAACATATGCTATCAGTTGGGATGATTTGCATGTGGAGGCTCGCTGGCGGCAGGGGCTTAGCTCCGGCGAGAACGGTGGCGGGTTCGAGAATGTGAGTAGAATAATTGTGGTGGATAAAAATTTCTCCGGCGACTCCACGACGGTTCAAGGGGCGGTGGATATGGTTCCTCATTATAACAAACAGAGAGTTAAGATCTACATTCTTCCTGGAATTTACAGAGAGAAGGTATACATACCCATCACCAAGCCATATATTTCATTCATTGGAAATAAGCAACGAGGTAACGACACTGTTATTACATGGAACGACAAAGCATCCGATAAAGATATCAATGGAGGGGATCTCGGGACGTATAGAACCGCGACTGTTGCGATCGACTCCGACTATTTTTGTGCAACAGAAATCACATTCGAAAATACAGTTGTTGCAGAGCCCGGAGATAGAGGAAGACAAGCTGTGGCTTTAAGAATTACAGGAGATAAGGCCATGTTTTTTAGAGTCAAATTCTTAGGAGAACAAGATACACTTTTGGATGATATGGGCACACACTACTTCTATCGATGTCACATTCAAGGAAGTGTTGATTTCATTTTTGGTAGAGCTCGATCACTATATGAGCAATGTATGATAACTTCCACAGCAGAGAACTATGGAGCAATAGCAGCACATCATCGAGACTCGGCAGACGAAGACACCGGGTTCTCTTTCGTGCGCTGCATAATCAATGGAAGTGGCAAAATACTCCTGGGAAGAGCATGGGGGCACTATTCAAGAACAATATATTCTTACTGTTACATTCAAGATATAATAACTCCATTAGGATGGAGTGACTGGAGCGACCCATCAAGACAAAGGACAGTAGTTTTTGGGCAATATAATTGCAGGGGCAATGGAGCTAACACAGAAGGTTGGGTGCCATGGGCAAAGACTTTCAGCTATGAGGAAGTGAGACCTTTTGTAGATAGGAAATTCATCAACGGAGAACAATGGCTTAACTTATGA 1089 43.99 MNRTFFFLHFLLLAIAGESSGDGAAAVETTYAISWDDLHVEARWRQGLSSGENGGGFENVSRIIVVDKNFSGDSTTVQGAVDMVPHYNKQRVKIYILPGIYREKVYIPITKPYISFIGNKQRGNDTVITWNDKASDKDINGGDLGTYRTATVAIDSDYFCATEITFENTVVAEPGDRGRQAVALRITGDKAMFFRVKFLGEQDTLLDDMGTHYFYRCHIQGSVDFIFGRARSLYEQCMITSTAENYGAIAAHHRDSADEDTGFSFVRCIINGSGKILLGRAWGHYSRTIYSYCYIQDIITPLGWSDWSDPSRQRTVVFGQYNCRGNGANTEGWVPWAKTFSYEEVRPFVDRKFINGEQWLNL 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 55549607 55553505 + Hsped.10g18740.1 Hepe10g1874 582421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1874 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 26 361 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Hepe10g1874 362 Gene3D - 57 362 IPR012334 -
Hepe10g1874 362 Pfam Pectinesterase 64 356 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Hepe10g1874 362 SUPERFAMILY Pectin lyase-like 60 361 IPR011050 -
Hepe10g1874 362 FunFam Pectinesterase 59 362 - -
Hepe10g1874 362 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0821 Hepe-Chr9:8035990 Hepe10g1874 Hepe-Chr10:55549607 1.43e-92 dispersed
Hepe09g0961 Hepe-Chr9:9736003 Hepe10g1874 Hepe-Chr10:55549607 1.01e-74 dispersed
Hepe10g1874 Hepe-Chr10:55549607 Hepe03g1383 Hepe-Chr3:70466893 9.51e-46 dispersed
Hepe10g1874 Hepe-Chr10:55549607 Hepe10g0628 Hepe-Chr10:7799371 1.14e-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1874 K01051 - csv:101209316 582.408