Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe10g1910 ATGTTCTCAAGAAGAACAATGCCTGCAATTTTAAGCAATCCCTTTCTTCCTCCTCATTTCTTCACCATAGCCTTGGTTTTATCTGTAAACTCCCTTCTCTTTTCTTCTTGTTACTCCATTGATGAACAGGGTAGAGCTCTTCTTACATGGAAAGATAATAATCTAACAAGCCCCACAGATGCTTTGAGTTCATGGAATCCTGGGGCCGAAACACCATGTTCATGGTTTGGAGTTCTCTGCAACTCGAAAGGAGAGGTGGTGGAGATATCCCTGACAGCAGTGGATTTGCAAGGTACATTGCCTACAAATTTTCAGGCTCTCAAGTTCTTGAAGACCCTTAGCATCTCTTCGACGAATATTACTGGAACGATTCCGAAAGAGTTTGGAGATTATGTTGAGCTCAGTATTCTCAATCTTAGCAACAATAACCTTTTGGGAAACATCCCAGAAGAGATTTGCAGGCTGAGCAAGCTGGAGGAATTGAGTCTTAATAGCAATGCTTTAGAAGGGATACCTTTGGAGATTGGAAATCTTTCAAACCTTGTGAATCTCGCACTCTTTGACAATATAATCAATGGGGAGATTCCAAGGAGCATTGGAATGTTGAAGAAGCTTGAGACTTTAAAAGTTGGAGGGAATGAAAATCTCAACGGTGGGTTGCCAATGGAGATTGGAAACTGCAGCAGTTTAACCATGATAGGCCTACCCGAAACCGGAATCACCGGTCCTCTTCCTTCATCAATTGGGATGCTGAAAAGAATCCAGTCCATAGCCGTGTATTCGACTCCACTTTCTGGTCCAATCCCAGAAGAGATTGTAAACTGTACTGACTTGCAGAATGTTTTCCTGTATGGCAATAATCTTTCCGGGGCAATACCAAGAGGAATTGGGAGGCTGATAAATCTTCAAAAACTTATTCTATGGCTGAATAACTTGGAGGGTGACATTCCAGAAGAAATTGGAAACTGCAAGGAACTCGTAGTCCTAGACATTTCAGAGAATCGTGTAACTGGAAGCATACCAAAAAGTCTTGGAAGCCTTCCAAAACTTCGAGATATTCAACTGAGTACTAATCAGCTAACTGGTACAATACCTCCTGAAATCACTAATTGTTCGTCTTTGGTTCACATGGAGATCGACAACAACAGAATTTGGGGCGAGATGCCAGTTGATATGGGCAACCTGAAGAACTTGAATATATTTTACACCTGGCAGAACCGACTTACAGGCAGTATTCCCAGCAGTCTCTCAAGCTGCCATAATCTCCAGGCTCTTGATTTTTCTTATAATCACCTGTCCGGTCCAATACCGAAAGAGCTTTTCGGGTTGAAAAATCTCACCAAAGTTCTTATGATATCAAATAATCTGTCCGGGATCATTCCACCTGATATAGGAAACTGTACAAAACTATTCCGGTTAAGACTGAAAGTGAATAGGATTGGAGGTACTATTCCATCAGAGATTGGGAATCTGAAGAACTTGAATTTTTTCGACATAGGTGAAAACCTTGTTGTTGGAGGACTTCCTCCATCGTTATTGAAATGTGATAATCTTCAGTTTATAGACCTCCATTCGAATGGGCTCAATGGTCCTTTTCTAGATGGTCTGCCAAAGAACCTACAGTATTTGGATATATCCAACAACAGGCTTCATGGTCAGATCAGTCCCGCCATTGGAGGATTGGTGGAAATAACAAAACTGGACCTCAGAAACAACCAACTTTCAGGGGAAATCCCTGGAGAAATTGTTTCCTGCGGGAAGCTCCAGTATTTAGACCTTAGCAACAATGGCTTCTCTGGGGAACTCCCAAAGGTGTTGGGTCAAATTTCGTCACTTGAAATTGGTCTTAATCTAAGTTGCAACCAATTTTCAGGTGAAATCCCATCCGAATTCTCTTATCTCACCAAACTTGGAATTCTAGATCTCTCCTACAACAACCTCTCTGGGAACCTTAGCTTTCTTGTAGACCTTGAAAACCTCGTGTCTCTAAACATCTCCCACAACGAATTCTCCGGCGAATTGCCCGACACACAGTTCTTTCGAAACCTCCCTCTAATTGACATTACCGGAAACAAAGGCCTCTCCGTTTCAGATGAGCTATTAACTCCTAAAGACAGTGTGGTATCCCACAGCAGAAGCAGAGAAGTAATAAAGATAGGCGTGCCAATCCTGATCACCATAAGTGCAGTGCTGTTCTTTCTAGCAATCTACATGCTACTCCGCACCCACATGGCCAATTCCAGCATCCTCACAGAAGGAGAAAAATGGGAAATAACCCTGTTTCAAAAGCTCAATTTCTCAATCGACGTCATCCTCCAAAACTTAACTCCATCCAATGTGATCGGCACCGGAGGCTCCGGTGTCGTCTACAGAGTCACAACCCCAAATGGGGGAACAATGGCAGTGAAGAAAATGTGGTCGAATGAGGAATCGGGAGCCTTCAGCTCTGAAATCCAAACTTTGGGATCAATTCGACACAAGAACATAATCAGGCTACTGGGTTCGGGATCCAACAGGCATTTGAAGCTCCTGTTTTATGATTATCTTCCAAATGGAAGCTTGAGCTCCCTTATCCATGGAGCTGGAAAAGGAGGAGCAGAATGGGAGACCAGATACGAAATCCTTTTAGGATTGGCTCATGCACTTGCATATCTCCACCATGATTGTGTTCCACCAATCTTACATGGCGATGTGAAATCCATGAATGTCCTGCTCGGCCATAACTTTGAACCATGCCTAGCCGACTTTGGGCTAGCCAGAAACGTGAGTAAAAACAGCGACGATTATGCTACAGGGAAGCCGTTCCTGGGACCTCATCTTGTTGGCTCTTTCGGCTACATGGCCCCTGGTATGTTCATTCATCTCCCCCTTTCAAAACCCATGTTTCGAATTTGGCAAATAGGACTCCATGGATTCAAAACTAAGGTTTTTTTTTTTTTTCTCTTGATGATTACAGAACAAGGGTCGATGGTGAGAATCACAGAGAAGAGCGATGTGTACAGCTTCGGTGTAGTGATAATGGAGGTTCTAACAGGGCGGCACCCATTGGACCCGACTTTACCGGATGGAGCCAATTTGGTGCAATGGGTTCAAGACCATTTCGCCACAACGAGAAACCCAGCCGCCATTCTCGATTCGAAGCTAAGAGGAAGAACCGATTCCACAATGCACGAAATGCTTCAAACTCTAACCCTCGGATTGATCTGTGTCGGCGTCAGGACCGAGGATCGACCCCCTATGAAAGATGTCGTCGCGATGCTCGAGGAGATTCCATATTTCAAACCGGGAAGAGCCGCCGCCGCCGACGGACCCAAGACGGGAATGACGGTGGTGGTTCAGTCGCCGTGGAAGAACCAAGGATCTACCCAGAGCTCCTTTGTCTTCTCTGATGACTGA 3396 44.35 MFSRRTMPAILSNPFLPPHFFTIALVLSVNSLLFSSCYSIDEQGRALLTWKDNNLTSPTDALSSWNPGAETPCSWFGVLCNSKGEVVEISLTAVDLQGTLPTNFQALKFLKTLSISSTNITGTIPKEFGDYVELSILNLSNNNLLGNIPEEICRLSKLEELSLNSNALEGIPLEIGNLSNLVNLALFDNIINGEIPRSIGMLKKLETLKVGGNENLNGGLPMEIGNCSSLTMIGLPETGITGPLPSSIGMLKRIQSIAVYSTPLSGPIPEEIVNCTDLQNVFLYGNNLSGAIPRGIGRLINLQKLILWLNNLEGDIPEEIGNCKELVVLDISENRVTGSIPKSLGSLPKLRDIQLSTNQLTGTIPPEITNCSSLVHMEIDNNRIWGEMPVDMGNLKNLNIFYTWQNRLTGSIPSSLSSCHNLQALDFSYNHLSGPIPKELFGLKNLTKVLMISNNLSGIIPPDIGNCTKLFRLRLKVNRIGGTIPSEIGNLKNLNFFDIGENLVVGGLPPSLLKCDNLQFIDLHSNGLNGPFLDGLPKNLQYLDISNNRLHGQISPAIGGLVEITKLDLRNNQLSGEIPGEIVSCGKLQYLDLSNNGFSGELPKVLGQISSLEIGLNLSCNQFSGEIPSEFSYLTKLGILDLSYNNLSGNLSFLVDLENLVSLNISHNEFSGELPDTQFFRNLPLIDITGNKGLSVSDELLTPKDSVVSHSRSREVIKIGVPILITISAVLFFLAIYMLLRTHMANSSILTEGEKWEITLFQKLNFSIDVILQNLTPSNVIGTGGSGVVYRVTTPNGGTMAVKKMWSNEESGAFSSEIQTLGSIRHKNIIRLLGSGSNRHLKLLFYDYLPNGSLSSLIHGAGKGGAEWETRYEILLGLAHALAYLHHDCVPPILHGDVKSMNVLLGHNFEPCLADFGLARNVSKNSDDYATGKPFLGPHLVGSFGYMAPGMFIHLPLSKPMFRIWQIGLHGFKTKVFFFFLLMITEQGSMVRITEKSDVYSFGVVIMEVLTGRHPLDPTLPDGANLVQWVQDHFATTRNPAAILDSKLRGRTDSTMHEMLQTLTLGLICVGVRTEDRPPMKDVVAMLEEIPYFKPGRAAAADGPKTGMTVVVQSPWKNQGSTQSSFVFSDD 1131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 55903880 55907852 + Hsped.10g19100.1 Hepe10g1910 582457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe10g1910 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe10g1910 1131 ProSiteProfiles Protein kinase domain profile. 775 1093 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1910 1131 SUPERFAMILY Protein kinase-like (PK-like) 764 1090 IPR011009 -
Hepe10g1910 1131 Pfam Protein kinase domain 778 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1910 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 204 651 IPR050647 -
Hepe10g1910 1131 SUPERFAMILY RNI-like 292 665 - -
Hepe10g1910 1131 Gene3D Phosphorylase Kinase; domain 1 752 848 - -
Hepe10g1910 1131 ProSitePatterns Protein kinases ATP-binding region signature. 781 804 IPR017441 GO:0005524(InterPro)
Hepe10g1910 1131 SUPERFAMILY L domain-like 73 406 - -
Hepe10g1910 1131 SMART serkin_6 775 1093 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe10g1910 1131 FunFam Nuclear pore complex protein NUP107 40 171 - -
Hepe10g1910 1131 FunFam Leucine-rich repeat receptor protein kinase EMS1 534 615 - -
Hepe10g1910 1131 Gene3D Ribonuclease Inhibitor 536 614 IPR032675 -
Hepe10g1910 1131 Gene3D Ribonuclease Inhibitor 337 435 IPR032675 -
Hepe10g1910 1131 Gene3D Ribonuclease Inhibitor 436 535 IPR032675 -
Hepe10g1910 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 438 532 - -
Hepe10g1910 1131 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 214 437 - -
Hepe10g1910 1131 Pfam Leucine rich repeat N-terminal domain 41 81 IPR013210 -
Hepe10g1910 1131 Gene3D Ribonuclease Inhibitor 198 336 IPR032675 -
Hepe10g1910 1131 FunFam Putative LRR receptor-like serine/threonine-protein kinase 616 700 - -
Hepe10g1910 1131 Pfam Leucine rich repeat 301 360 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 Pfam Leucine rich repeat 539 597 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 SMART LRR_typ_2 561 585 IPR003591 -
Hepe10g1910 1131 SMART LRR_typ_2 657 681 IPR003591 -
Hepe10g1910 1131 SMART LRR_typ_2 155 178 IPR003591 -
Hepe10g1910 1131 SMART LRR_typ_2 299 323 IPR003591 -
Hepe10g1910 1131 SMART LRR_typ_2 443 467 IPR003591 -
Hepe10g1910 1131 SMART LRR_typ_2 347 371 IPR003591 -
Hepe10g1910 1131 Pfam Leucine Rich Repeat 659 676 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 Pfam Leucine Rich Repeat 110 129 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 Pfam Leucine Rich Repeat 616 634 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 Pfam Leucine Rich Repeat 134 155 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 Pfam Leucine Rich Repeat 421 443 IPR001611 GO:0005515(InterPro)
Hepe10g1910 1131 Gene3D Ribonuclease Inhibitor 40 197 IPR032675 -
Hepe10g1910 1131 Gene3D Ribonuclease Inhibitor 615 699 IPR032675 -
Hepe10g1910 1131 FunFam Putative LRR receptor-like serine/threonine-protein kinase 760 848 - -
Hepe10g1910 1131 Gene3D Transferase(Phosphotransferase) domain 1 849 1095 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe09g0218 Hepe-Chr9:1858711 Hepe10g1910 Hepe-Chr10:55903880 7.13e-98 dispersed
Hepe10g1910 Hepe-Chr10:55903880 Hepe07g0583 Hepe-Chr7:6307627 3.49e-60 dispersed
Hepe10g1910 Hepe-Chr10:55903880 Hepe04g1362 Hepe-Chr4:69258205 8.09e-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73203 PF00069 Pkinase 5.90E-26 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe10g1910 - - - 0.0